BLASTX nr result

ID: Coptis23_contig00007657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007657
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16910.3| unnamed protein product [Vitis vinifera]               79   4e-13
ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]        79   4e-13
ref|XP_003621593.1| FHA domain protein [Medicago truncatula] gi|...    67   2e-09
ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09
emb|CAN71737.1| hypothetical protein VITISV_011557 [Vitis vinifera]    67   2e-09

>emb|CBI16910.3| unnamed protein product [Vitis vinifera]
          Length = 673

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/95 (47%), Positives = 57/95 (60%)
 Frame = +2

Query: 2   QEAAPSNVDDSDQFVDYKDRKEALGSTVSIQVESGIEAAAPGLIIRKRKLVEKPKESDDK 181
           QEAA  N  +SDQFVDYKDR +ALG    +++ESGIE AAPGLIIRKRK +E  ++SDDK
Sbjct: 520 QEAALVNNHESDQFVDYKDRMKALGI---VEMESGIETAAPGLIIRKRKQLEISEDSDDK 576

Query: 182 ATQXXXXXXXXXXXXXXXXXXXXKHQKGLLVSDEE 286
           A +                    KH +G   S++E
Sbjct: 577 APEQSTSSSGPNIMAEDAVALLLKHSRGYYASEDE 611


>ref|XP_002278556.1| PREDICTED: kanadaptin-like [Vitis vinifera]
          Length = 753

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 45/95 (47%), Positives = 57/95 (60%)
 Frame = +2

Query: 2   QEAAPSNVDDSDQFVDYKDRKEALGSTVSIQVESGIEAAAPGLIIRKRKLVEKPKESDDK 181
           QEAA  N  +SDQFVDYKDR +ALG    +++ESGIE AAPGLIIRKRK +E  ++SDDK
Sbjct: 600 QEAALVNNHESDQFVDYKDRMKALGI---VEMESGIETAAPGLIIRKRKQLEISEDSDDK 656

Query: 182 ATQXXXXXXXXXXXXXXXXXXXXKHQKGLLVSDEE 286
           A +                    KH +G   S++E
Sbjct: 657 APEQSTSSSGPNIMAEDAVALLLKHSRGYYASEDE 691


>ref|XP_003621593.1| FHA domain protein [Medicago truncatula]
           gi|355496608|gb|AES77811.1| FHA domain protein [Medicago
           truncatula]
          Length = 827

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 38/93 (40%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
 Frame = +2

Query: 14  PSNVDDSDQFVDYKDRKEALGS--TVSIQVESGIEAAAPGLIIRKRKLVEKPKESDDKAT 187
           P  +D+SDQFVDYKDR + LG     S  +ES IE+AAPGLI+RKRK VE      D A+
Sbjct: 686 PHEMDESDQFVDYKDRNKILGGGDDASTSLESRIESAAPGLILRKRKQVETTGTGSDDAS 745

Query: 188 QXXXXXXXXXXXXXXXXXXXXKHQKGLLVSDEE 286
           Q                    K+Q+GL  + ++
Sbjct: 746 QQSTSSTSGEQTAEDAVALLLKYQRGLYAASDD 778


>ref|XP_002331283.1| predicted protein [Populus trichocarpa] gi|222873708|gb|EEF10839.1|
           predicted protein [Populus trichocarpa]
          Length = 717

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +2

Query: 23  VDDSDQFVDYKDRKEALGST--VSIQVESGIEAAAPGLIIRKRKLVEKPKESDDKA-TQX 193
           +D+SDQFVDYKDR++ L S     + V+S IE+AAPGLIIRKRK  E P  +D++A  Q 
Sbjct: 565 MDESDQFVDYKDRQKILSSVDGAEVNVDSEIESAAPGLIIRKRKGAEGPGANDNEAPEQL 624

Query: 194 XXXXXXXXXXXXXXXXXXXKHQKGLLVSDEEGH 292
                              KH++G    DEEG+
Sbjct: 625 TSSSVGAELLAEDAVALLLKHKRGYHAEDEEGN 657


>emb|CAN71737.1| hypothetical protein VITISV_011557 [Vitis vinifera]
          Length = 854

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 38/90 (42%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
 Frame = +2

Query: 23  VDDSDQFVDYKDRKEALG--STVSIQVESGIEAAAPGLIIRKRKLVEKPKESDDKATQXX 196
           V+++ Q    KDR +ALG    V +++ESGIE AAPGLIIRKRK VEK ++SDDKA +  
Sbjct: 703 VEETPQEAALKDRXKALGIVDDVQVKMESGIETAAPGLIIRKRKQVEKSEDSDDKAPEQS 762

Query: 197 XXXXXXXXXXXXXXXXXXKHQKGLLVSDEE 286
                             KH +G   S++E
Sbjct: 763 TSSSGPNIMAEDAVALLLKHSRGYYASEDE 792


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