BLASTX nr result

ID: Coptis23_contig00007612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007612
         (2264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269779.2| PREDICTED: putative disease resistance prote...   216   2e-53
ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13...   213   2e-52
ref|XP_003633531.1| PREDICTED: putative disease resistance prote...   211   5e-52
emb|CBI40193.3| unnamed protein product [Vitis vinifera]              209   3e-51
ref|XP_002525457.1| leucine-rich repeat containing protein, puta...   208   4e-51

>ref|XP_002269779.2| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 1091

 Score =  216 bits (551), Expect = 2e-53
 Identities = 140/391 (35%), Positives = 204/391 (52%), Gaps = 15/391 (3%)
 Frame = +2

Query: 62   RHSALDEYYRVDDGGNSCISENT-----LHSSFRDSIDPVTLKDLFQAKNLCSLMILHQH 226
            ++ A D  +R+++G +  ISE       LH++F+     VT + L    NL ++++LH  
Sbjct: 486  QYLAGDLCFRLEEGKSQSISERARHAAVLHNTFKSG---VTFEALGTTTNLRTVILLH-- 540

Query: 227  GSHIEQVPR-----DLFLNLRSLRVLDFSHTRITELPSTIRYLKDLRLLNLSGTPIQALP 391
            G+   + P+     DL   LR LRVLD SH  + E+P  +  LK LR LNLS T I+ LP
Sbjct: 541  GNERSETPKAIVLHDLLPTLRCLRVLDLSHIAVEEIPDMVGRLKHLRYLNLSSTRIKMLP 600

Query: 392  NSLGSLSQMQTLKLRDCFKLLSLPKCIRKLINLRHLEANVASLLVSMPPGLGDLTELQTL 571
             S+ +L  +Q+L L +C  L  LP  ++KL+NLRHL       L+ MPP +G+LT L+TL
Sbjct: 601  PSVCTLYNLQSLILMNCNNLKGLPNDMKKLLNLRHLNLTGCWHLICMPPQIGELTCLRTL 660

Query: 572  PAFVVGKENGCHITELKHMVNVHGTLHILRLENVFSLEEAKEAALDQLKYIQKLELQWSE 751
              FVV KE GC I ELK M  +  TL I RLE+V  + E +EA L   +Y+++LEL+WS 
Sbjct: 661  HRFVVAKEKGCGIGELKGMTELRATLIIDRLEDVSMVSEGREANLKNKQYLRRLELKWSP 720

Query: 752  LHD-----GHEILENLRPHMELEELQIVGYGDAKFPTWIGDPIFSKLTTITIHDCRKCEX 916
             H      G E+LE L PH  L+EL+I  Y  AKFP W+G  + S+L  I +  C     
Sbjct: 721  GHHMPHAIGEELLECLEPHGNLKELKIDVYHGAKFPNWMGYSLLSRLERIELSQCTYSRI 780

Query: 917  XXXXXXXXXXXXXXVSKMHEVKVINHQFCGRDMDNESLDLERLDRGTVYENLSSYKAFTR 1096
                          +  M E++ I+ +FCG                         + F  
Sbjct: 781  LPPLGQLPLLKYLSIDTMSELESISCEFCGE---------------------GQIRGFPS 819

Query: 1097 LVSLTLNEIPKLEKWTGVVVGDFPQLQKLNI 1189
            L  + L ++  L++W  +  GDFP+L +L I
Sbjct: 820  LEKMKLEDMKNLKEWHEIEEGDFPRLHELTI 850


>ref|XP_003633526.1| PREDICTED: putative disease resistance RPP13-like protein 1-like
            [Vitis vinifera]
          Length = 1308

 Score =  213 bits (541), Expect = 2e-52
 Identities = 141/399 (35%), Positives = 200/399 (50%), Gaps = 30/399 (7%)
 Frame = +2

Query: 242  QVPRDLFLNLRSLRVLDFSHTRITELPSTIRYLKDLRLLNLSGTPIQALPNSLGSLSQMQ 421
            +V  DL + ++ LRVL  S  +++ELPS+I  L  LR LNL  + I+ LPNS+G L  +Q
Sbjct: 579  KVTHDLLMEMKCLRVLSLSGYKMSELPSSIDNLSHLRYLNLCRSSIKRLPNSVGHLYNLQ 638

Query: 422  TLKLRDCFKLLSLPKCIRKLINLRHLEANVASLLVSMPPGLGDLTELQTLPAFVVGKENG 601
            TL LRDC+ L  +P  +  LINLRHL+    S L  MPP +G LT LQTL  F+VGK NG
Sbjct: 639  TLILRDCWSLTEMPVGMGNLINLRHLDIAGTSQLQEMPPRMGSLTNLQTLSKFIVGKGNG 698

Query: 602  CHITELKHMVNVHGTLHILRLENVFSLEEAKEAALDQLKYIQKLELQWSELHDGHE---- 769
              I ELKH++++ G L I  L N  +  +A +A L    +I++L + WS   D       
Sbjct: 699  SSIQELKHLLDLQGELSIQGLHNARNTRDAVDACLKNKCHIEELTMGWSGDFDDSRNELN 758

Query: 770  ---ILENLRPHMELEELQIVGYGDAKFPTWIGDPIFSKLTTITIHDCRKCEXXXXXXXXX 940
               +LE L+P   L+ L +  YG  KFP+WIG+P FSK+ ++T+ +C KC          
Sbjct: 759  EMLVLELLQPQRNLKNLTVEFYGGPKFPSWIGNPSFSKMESLTLKNCGKCTSLPCLGRLS 818

Query: 941  XXXXXXVSKMHEVKVINHQFCGR-DMDNESLDLERLDRGTVYENLSSYK----------- 1084
                  +  M +VK I  +F G   +      LE L     +E++  ++           
Sbjct: 819  LLKALHIQGMCKVKTIGDEFFGEVSLFQPFPCLESLR----FEDMPEWEDWCFSDMVEEC 874

Query: 1085 --AFTRLVSLTLNEIPKLEKWTGVVVGDFPQLQKLNIFDCXXXXXXXXXXXXXXXXXXE- 1255
               F  L  L + E PKL   TG +    P L +L IF+C                  + 
Sbjct: 875  EGLFCCLRELRIRECPKL---TGSLPNCLPSLTELEIFECPKLKAALPRLAYRLPNGLQS 931

Query: 1256 --------IRLCPSLESFPMKGLPNSLQHLVIIDCPLLK 1348
                    ++ CP LESFP  GLP+ L+ LV+  C  LK
Sbjct: 932  LTCLEELSLQSCPKLESFPEMGLPSMLRSLVLQKCKTLK 970


>ref|XP_003633531.1| PREDICTED: putative disease resistance protein RGA3-like [Vitis
            vinifera]
          Length = 961

 Score =  211 bits (538), Expect = 5e-52
 Identities = 138/391 (35%), Positives = 203/391 (51%), Gaps = 15/391 (3%)
 Frame = +2

Query: 62   RHSALDEYYRVDDGGNSCISENT-----LHSSFRDSIDPVTLKDLFQAKNLCSLMILHQH 226
            ++ A D  +R+++G +  ISE       LH++F+     VT + L    NL ++++LH  
Sbjct: 393  QYLAGDLCFRLEEGKSQSISERARHAAVLHNTFKSG---VTFEALGTTTNLRTVILLH-- 447

Query: 227  GSHIEQVPR-----DLFLNLRSLRVLDFSHTRITELPSTIRYLKDLRLLNLSGTPIQALP 391
            G+   + P+     DL  +LR LRVLD SH  + E+P  +  LK LR LNLS T I+ LP
Sbjct: 448  GNERSETPKAIVLHDLLPSLRCLRVLDLSHIAVEEIPDMVGRLKHLRYLNLSSTRIKMLP 507

Query: 392  NSLGSLSQMQTLKLRDCFKLLSLPKCIRKLINLRHLEANVASLLVSMPPGLGDLTELQTL 571
             S+ +L  +Q+L L +C  L  LP  ++KL+NLRHL       L+ MPP +G+LT L+TL
Sbjct: 508  PSVCTLYNLQSLILMNCNNLKGLPIDMKKLLNLRHLNLTGCWHLICMPPQIGELTCLRTL 567

Query: 572  PAFVVGKENGCHITELKHMVNVHGTLHILRLENVFSLEEAKEAALDQLKYIQKLELQWSE 751
              F V KE GC I ELK M  +  TL I RLE+V  + E +EA L   +Y+++LEL+WS 
Sbjct: 568  HRFFVAKEKGCGIGELKGMTELRATLIIDRLEDVSMVSEGREANLKNKQYLRRLELKWSP 627

Query: 752  LH-----DGHEILENLRPHMELEELQIVGYGDAKFPTWIGDPIFSKLTTITIHDCRKCEX 916
             H      G E+LE L PH  L+EL+I  Y  AKFP W+G  +  +L  I +  C     
Sbjct: 628  GHHMPHATGEELLECLEPHGNLKELKIDVYHGAKFPNWMGYSLLPRLERIELSQCTYSRI 687

Query: 917  XXXXXXXXXXXXXXVSKMHEVKVINHQFCGRDMDNESLDLERLDRGTVYENLSSYKAFTR 1096
                          +  M E++ I+ +FCG                         + F  
Sbjct: 688  LPPLGQLPLLKYLSIDTMSELESISCEFCGE---------------------GQIRGFPS 726

Query: 1097 LVSLTLNEIPKLEKWTGVVVGDFPQLQKLNI 1189
            L  + L ++  L++W  +  GDFP+L +L I
Sbjct: 727  LEKMKLEDMKNLKEWHEIEDGDFPRLHELTI 757


>emb|CBI40193.3| unnamed protein product [Vitis vinifera]
          Length = 908

 Score =  209 bits (532), Expect = 3e-51
 Identities = 155/441 (35%), Positives = 217/441 (49%), Gaps = 23/441 (5%)
 Frame = +2

Query: 92   VDDGGNSCISENTLHSSFRDSIDPVTLK--DLFQAKNLCSLMILHQHGSHIE------QV 247
            +D       S +  HSSF      V  K  D ++AKNL + + L  H  + +      +V
Sbjct: 198  LDSNQKHTFSGSVRHSSFARCKYEVFRKFEDFYKAKNLRTFLALPIHMQYYDFFHLTDKV 257

Query: 248  PRDLFLNLRSLRVLDFSHTRITELPSTIRYLKDLRLLNLSGTPIQALPNSLGSLSQMQTL 427
              DL   LR LRVL  SH  I ELP++I  LK LR LNLS T IQ LP+SL  L  +QTL
Sbjct: 258  SHDLLPKLRYLRVLSLSHYEIRELPNSIGDLKHLRYLNLSCTIIQELPDSLSDLHNLQTL 317

Query: 428  KLRDCFKLLSLPKCIRKLINLRHLEANVASLLVSMPPGLGDLTELQTLPAFVVGKENGCH 607
             L  C +L  LP+  + LINLRHL+      L  MPP +G L  LQTL  F+VGK     
Sbjct: 318  VLFRCRRLNRLPRGFKNLINLRHLDIAHTHQLEVMPPQMGKLKSLQTLSKFIVGKSKELG 377

Query: 608  ITELKHMVNVHGTLHILRLENVFSLEEAKEAALDQLKYIQKLELQW-SELHDGHE----- 769
            I EL  ++++ G L IL L+NV  +++A++A L    ++++L ++W S + D  +     
Sbjct: 378  IKELGDLLHLRGKLSILDLQNVVDIQDARDANLKDKHHLEELLMEWSSNMFDDSQNETIE 437

Query: 770  --ILENLRPHMELEELQIVGYGDAKFPTWIGDPIFSKLTTITIHDCRKCEXXXXXXXXXX 943
              +L  L+P+  L++L I  YG   FP WIGDP FSK+  + ++ CRKC           
Sbjct: 438  LNVLHFLQPNTNLKKLTIQSYGGLTFPYWIGDPSFSKMVCLELNYCRKCTLLPSLGRLSS 497

Query: 944  XXXXXVSKMHEVKVINHQFCGRD----MDNESLDLERLDRGTVYENLSSYKAFTRLVSLT 1111
                 V  M  VK +  +F G          SL+  R +    +E   S +++ RL  L 
Sbjct: 498  LKKLCVKGMQGVKSVGIEFYGEPSLCVKPFPSLEFLRFEDMPEWEEWCSSESYPRLRELE 557

Query: 1112 LNEIPKLEKWTGVVVGDFPQLQKLNIFDC-XXXXXXXXXXXXXXXXXXEIRLCPSLESFP 1288
            ++  PKL +    +    P L KL+I DC                   EI  C SLE  P
Sbjct: 558  IHHCPKLIQ---KLPSHLPSLVKLDIIDCPKLVAPLPNQPLPCNLEYLEINKCASLEKLP 614

Query: 1289 MKGLPN--SLQHLVIIDCPLL 1345
            + GL +  SL+ L I  CP L
Sbjct: 615  I-GLQSLTSLRELSIQKCPKL 634


>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
            gi|223535270|gb|EEF36947.1| leucine-rich repeat
            containing protein, putative [Ricinus communis]
          Length = 1177

 Score =  208 bits (530), Expect = 4e-51
 Identities = 134/354 (37%), Positives = 187/354 (52%), Gaps = 7/354 (1%)
 Frame = +2

Query: 92   VDDGGNSCISENTLHSSFR-DSIDPVTLKDLFQAKNLCSLMILHQHGSHIEQVPRDLFLN 268
            ++ G N  I + T H S   + +     K  ++AKNL +L+ L +    + QVPR LFL 
Sbjct: 512  LEAGSNQIIPKGTRHLSLVCNKVTENIPKCFYKAKNLHTLLALTEKQEAV-QVPRSLFLK 570

Query: 269  LRSLRVLDFSHTRITELPSTIRYLKDLRLLNLSGTPIQALPNSLGSLSQMQTLKLRDCFK 448
             R L VL  + T I +LP+++  L  LRLL++S T I+ALP S+ SL  +QTL L  CF+
Sbjct: 571  FRYLHVLILNSTCIRKLPNSLGKLIHLRLLDVSHTDIEALPKSITSLVNLQTLNLSHCFE 630

Query: 449  LLSLPKCIRKLINLRHLEANVASLLVSMPPGLGDLTELQTLPAFVVGKENGCHITELKHM 628
            L  LPK  R LI+LRH   +    L  MP  +G+LT LQTL  F+VGKE GC + ELK +
Sbjct: 631  LQELPKNTRNLISLRHTIIDHCHSLSKMPSRIGELTSLQTLSQFIVGKEYGCRLGELK-L 689

Query: 629  VNVHGTLHILRLENVFSLEEAKEAALDQLKYIQKLELQWSELHDGHEI-LENLRPHMELE 805
            +N+ G L I +LENV    +AKEA L +   +  L+L W   HD  EI LE L+PH  L+
Sbjct: 690  LNLRGELVIKKLENVMYRRDAKEARLQEKHNLSLLKLSWDRPHDISEIVLEALKPHENLK 749

Query: 806  ELQIVGYGDAKFPTWIGDPIFSKLTTITIHDCRKCEXXXXXXXXXXXXXXXVSKMHEVKV 985
               + GY   KFPTW+ D I SKL  I +  C +CE               +  M  V  
Sbjct: 750  RFHLKGYMGVKFPTWMMDAILSKLVEIKLKKCMRCEFLPPLGQLPVLKALYIRGMDAVTY 809

Query: 986  INHQFCGRDMDN-----ESLDLERLDRGTVYENLSSYKAFTRLVSLTLNEIPKL 1132
            +  +F G  + N     E  ++  +     + N    +A TR+  L +   PKL
Sbjct: 810  VGKEFYGNGVINGFPLLEHFEIHAMPNLEEWLNFDEGQALTRVKKLVVKGCPKL 863


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