BLASTX nr result

ID: Coptis23_contig00007604 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007604
         (1576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81625.1| hypothetical protein VITISV_014255 [Vitis vinifera]   170   2e-50
ref|XP_002276625.1| PREDICTED: transcription factor HBP-1a [Viti...   170   3e-50
ref|XP_002326749.1| predicted protein [Populus trichocarpa] gi|2...   166   9e-48
ref|XP_002304358.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-46
ref|XP_004163202.1| PREDICTED: transcription factor HBP-1a-like ...   160   8e-46

>emb|CAN81625.1| hypothetical protein VITISV_014255 [Vitis vinifera]
          Length = 413

 Score =  170 bits (431), Expect(2) = 2e-50
 Identities = 115/270 (42%), Positives = 135/270 (50%), Gaps = 10/270 (3%)
 Frame = -2

Query: 1284 PLKRSKGSLGSLNMLIGKDNESGKASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHSE 1105
            P+KRSKGSLGSLNML GK+NE GK SG                                +
Sbjct: 138  PIKRSKGSLGSLNMLTGKNNELGKTSGASANGVYSKSAESASEGSSEGSDANSQSDSQLK 197

Query: 1104 KG----SADAEAQNGGTACXXXXXXXXXXXXQAMVNPGMVM---TVP--PNSVSGPTTNL 952
             G    S +AE    G+ C             AMVN  M +   + P  P  V GPTTNL
Sbjct: 198  SGCRQDSLEAETSQNGSTCHAPQNGGPNTPH-AMVNQTMAIMPISAPGAPGGVPGPTTNL 256

Query: 951  NIGMDYWGGPTPPPVATGRAKLPTVQPPGAIVPSLLVGSRDGIPPELFIQDERELKRQRR 772
            NIGMDYWG PT   +   R K+P+    G IV +   GSRD +  +L++QDERELKRQRR
Sbjct: 257  NIGMDYWGAPTSSTIPAMRGKVPSAPVTGGIVTA---GSRDSVQSQLWLQDERELKRQRR 313

Query: 771  KQSNRESARRSRLRKQAEYDELAQRVXXXXXXXXXXXXXXXXXXXECDKLASENASLNEK 592
            KQSNRESARRSRLRKQAE DELAQR                    E ++L SENASL E+
Sbjct: 314  KQSNRESARRSRLRKQAECDELAQRADALKEENASLRAEVNRIKSEYEQLLSENASLKER 373

Query: 591  LQNQVGQES-RVDGVNGQPESDPAANVDST 505
            L    GQ+  R  G N Q   +       T
Sbjct: 374  LGEIPGQDDHRTGGRNEQHSGNDTKQTGQT 403



 Score = 57.0 bits (136), Expect(2) = 2e-50
 Identities = 32/71 (45%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1574 DWASFQAYYNSAGTXXXXXPGFFHSPVASSPQAHPYMWG-QHMLXXXXXXXXXXXXXXPH 1398
            DW+ FQAY               H  +ASSPQAHPYMWG QH++              P 
Sbjct: 37   DWSGFQAYSPIPP----------HGFLASSPQAHPYMWGVQHLMPPYGTPPHPYVAMYPP 86

Query: 1397 GGLYAHPSMPP 1365
            GGLYAHPS+PP
Sbjct: 87   GGLYAHPSIPP 97


>ref|XP_002276625.1| PREDICTED: transcription factor HBP-1a [Vitis vinifera]
            gi|297742030|emb|CBI33817.3| unnamed protein product
            [Vitis vinifera]
          Length = 413

 Score =  170 bits (430), Expect(2) = 3e-50
 Identities = 114/258 (44%), Positives = 133/258 (51%), Gaps = 10/258 (3%)
 Frame = -2

Query: 1284 PLKRSKGSLGSLNMLIGKDNESGKASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHSE 1105
            P+KRSKGSLGSLNML GK+NE GK SG                                +
Sbjct: 138  PIKRSKGSLGSLNMLTGKNNELGKTSGASANGVYSKSAESASEGSSEGSDANSQSDSQLK 197

Query: 1104 KG----SADAEAQNGGTACXXXXXXXXXXXXQAMVNPGMVM---TVP--PNSVSGPTTNL 952
             G    S +AE    G+ C             AMVN  M +   + P  P  V GPTTNL
Sbjct: 198  SGCRQDSLEAETSQNGSTCHAPQNGGPNTPH-AMVNQTMAIMPISAPGAPGGVPGPTTNL 256

Query: 951  NIGMDYWGGPTPPPVATGRAKLPTVQPPGAIVPSLLVGSRDGIPPELFIQDERELKRQRR 772
            NIGMDYWG PT   +   R K+P+    G IV +   GSRD +  +L++QDERELKRQRR
Sbjct: 257  NIGMDYWGAPTSSTIPAMRGKVPSAPVTGGIVTA---GSRDSVQSQLWLQDERELKRQRR 313

Query: 771  KQSNRESARRSRLRKQAEYDELAQRVXXXXXXXXXXXXXXXXXXXECDKLASENASLNEK 592
            KQSNRESARRSRLRKQAE DELAQR                    E ++L SENASL E+
Sbjct: 314  KQSNRESARRSRLRKQAECDELAQRADALKEENASLRAEVSRIKSEYEQLLSENASLKER 373

Query: 591  LQNQVGQES-RVDGVNGQ 541
            L    GQ+  R  G N Q
Sbjct: 374  LGEIPGQDDHRTGGRNEQ 391



 Score = 57.0 bits (136), Expect(2) = 3e-50
 Identities = 32/71 (45%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1574 DWASFQAYYNSAGTXXXXXPGFFHSPVASSPQAHPYMWG-QHMLXXXXXXXXXXXXXXPH 1398
            DW+ FQAY               H  +ASSPQAHPYMWG QH++              P 
Sbjct: 37   DWSGFQAYSPIPP----------HGFLASSPQAHPYMWGVQHLMPPYGTPPHPYVAMYPP 86

Query: 1397 GGLYAHPSMPP 1365
            GGLYAHPS+PP
Sbjct: 87   GGLYAHPSIPP 97


>ref|XP_002326749.1| predicted protein [Populus trichocarpa] gi|222834071|gb|EEE72548.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  166 bits (420), Expect(2) = 9e-48
 Identities = 108/269 (40%), Positives = 135/269 (50%), Gaps = 9/269 (3%)
 Frame = -2

Query: 1284 PLKRSKGSLGSLNMLIGKDNESGKASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHSE 1105
            P+KRSKGSLGSLNM+ GK+NE GK +G                                +
Sbjct: 138  PIKRSKGSLGSLNMITGKNNEHGKTTGVSANGAYSKSAESGSEGSSEGSDANSQSDSQMK 197

Query: 1104 KG----SADAEAQNGGTACXXXXXXXXXXXXQAMVNPGMVM-----TVPPNSVSGPTTNL 952
             G    S +  +QNGG+A               ++N  M +        P ++ GPTTNL
Sbjct: 198  SGGRQDSLEDSSQNGGSA--HGAQNGGQGASNTIMNQTMAIMPISAASAPGAIPGPTTNL 255

Query: 951  NIGMDYWGGPTPPPVATGRAKLPTVQPPGAIVPSLLVGSRDGIPPELFIQDERELKRQRR 772
            NIGMDYWG P    V   R K+P+    G +V +   GSRDG+  ++++QDERELKRQRR
Sbjct: 256  NIGMDYWGAPASSTVPAIRGKVPSTPVAGGVVST---GSRDGVQSQIWLQDERELKRQRR 312

Query: 771  KQSNRESARRSRLRKQAEYDELAQRVXXXXXXXXXXXXXXXXXXXECDKLASENASLNEK 592
            KQSNRESARRSRLRKQAE DELAQR                    E ++L +ENASL E+
Sbjct: 313  KQSNRESARRSRLRKQAECDELAQRAEALKEENANLRSEVNQIKSEYEQLLAENASLKER 372

Query: 591  LQNQVGQESRVDGVNGQPESDPAANVDST 505
            L    GQE    G N Q  S+       T
Sbjct: 373  LGEVSGQEDFRAGRNDQHMSNDTQQTGQT 401



 Score = 52.4 bits (124), Expect(2) = 9e-48
 Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1574 DWASFQAYYNSAGTXXXXXPGFFHSPVASSPQAHPYMWG-QHMLXXXXXXXXXXXXXXPH 1398
            DW+ FQAY           PGF    +ASSPQAHPYMWG QH++              PH
Sbjct: 38   DWSGFQAY------SPIPPPGF----LASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPH 87

Query: 1397 GGLYAHPSMPP 1365
             G+YAHPS+PP
Sbjct: 88   -GVYAHPSIPP 97


>ref|XP_002304358.1| predicted protein [Populus trichocarpa] gi|222841790|gb|EEE79337.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  160 bits (406), Expect(2) = 3e-46
 Identities = 108/269 (40%), Positives = 134/269 (49%), Gaps = 9/269 (3%)
 Frame = -2

Query: 1284 PLKRSKGSLGSLNMLIGKDNESGKASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHSE 1105
            P+KRSKGSLGSLNM+ GK+NE G+ +G                                +
Sbjct: 138  PIKRSKGSLGSLNMITGKNNEHGRTTGASANGAYSKSAESGSEGTSEGSDADSQSDSQMK 197

Query: 1104 KG----SADAEAQNGGTACXXXXXXXXXXXXQAMVNPGM-VMTV----PPNSVSGPTTNL 952
             G    S +  +QNGG+A               ++N  M V+ +     P  + GPTTNL
Sbjct: 198  SGGRQDSLEETSQNGGSA---HAAQNGGQGASTIMNQTMGVLPISAASAPGVIPGPTTNL 254

Query: 951  NIGMDYWGGPTPPPVATGRAKLPTVQPPGAIVPSLLVGSRDGIPPELFIQDERELKRQRR 772
            NIGMDYWG P    V   R K+P+    G I  +   GSRDG+  + ++QDERELKRQRR
Sbjct: 255  NIGMDYWGAPVASSVPAIRGKVPSTPVAGGIATA---GSRDGVQSQHWLQDERELKRQRR 311

Query: 771  KQSNRESARRSRLRKQAEYDELAQRVXXXXXXXXXXXXXXXXXXXECDKLASENASLNEK 592
            KQSNRESARRSRLRKQAE DELAQR                    E ++L +ENASL E+
Sbjct: 312  KQSNRESARRSRLRKQAECDELAQRAEVLKEENANLRSEVNRIKSEYEQLLAENASLKER 371

Query: 591  LQNQVGQESRVDGVNGQPESDPAANVDST 505
            L    GQE    G N Q  S+       T
Sbjct: 372  LGEVHGQEDSRAGRNDQHTSNDTQQTGQT 400



 Score = 52.8 bits (125), Expect(2) = 3e-46
 Identities = 33/71 (46%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1574 DWASFQAYYNSAGTXXXXXPGFFHSPVASSPQAHPYMWG-QHMLXXXXXXXXXXXXXXPH 1398
            DW+ FQAY +         PGF    +ASSPQAHPYMWG QH++              PH
Sbjct: 38   DWSGFQAYSH------IPPPGF----LASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPH 87

Query: 1397 GGLYAHPSMPP 1365
             G+YAHPS+PP
Sbjct: 88   -GVYAHPSIPP 97


>ref|XP_004163202.1| PREDICTED: transcription factor HBP-1a-like [Cucumis sativus]
          Length = 400

 Score =  160 bits (405), Expect(2) = 8e-46
 Identities = 101/243 (41%), Positives = 124/243 (51%), Gaps = 4/243 (1%)
 Frame = -2

Query: 1284 PLKRSKGSLGSLNMLIGKDNESGKASGTXXXXXXXXXXXXXXXXXXXXXXXXXXXSQHSE 1105
            P+KRSKGSLGSL+M+ GK+NE GK SGT                               +
Sbjct: 137  PIKRSKGSLGSLSMITGKNNELGKPSGTSANGVYSKSAESESEGTSERSDADSENDSQLK 196

Query: 1104 KGSADAEAQNGGTACXXXXXXXXXXXXQAMVNPGMVMTVPP----NSVSGPTTNLNIGMD 937
             GS     + GGT               A       M++ P     +V+GP TNLNIGMD
Sbjct: 197  SGSGKDSLEGGGTPNGLMHGSQNEGHSLAHPLVNQTMSIIPIQASGAVTGPATNLNIGMD 256

Query: 936  YWGGPTPPPVATGRAKLPTVQPPGAIVPSLLVGSRDGIPPELFIQDERELKRQRRKQSNR 757
            YWG PT   +++   K+P+    GA+      GSRDGIP + ++QDERELKRQRRKQSNR
Sbjct: 257  YWGTPTTSAISSLCGKVPSAPVAGAVA----AGSRDGIPSQPWLQDERELKRQRRKQSNR 312

Query: 756  ESARRSRLRKQAEYDELAQRVXXXXXXXXXXXXXXXXXXXECDKLASENASLNEKLQNQV 577
            ESARRSRLRKQAE DEL+QR                    E ++L SENASL  +L    
Sbjct: 313  ESARRSRLRKQAECDELSQRAEALKEENASLRSEVDRIRTEYEQLLSENASLKRRLGESD 372

Query: 576  GQE 568
            G E
Sbjct: 373  GNE 375



 Score = 51.6 bits (122), Expect(2) = 8e-46
 Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
 Frame = -3

Query: 1574 DWASFQAYYNSAGTXXXXXPGFFHSPVASSPQAHPYMWG-QHMLXXXXXXXXXXXXXXPH 1398
            +W+ FQAY           PG+    +A+SPQAHPYMWG Q ++              PH
Sbjct: 36   EWSGFQAY------SPIPPPGY----LATSPQAHPYMWGVQPIMPPYGTPPHPYVAMYPH 85

Query: 1397 GGLYAHPSMPP 1365
            GG+YAHP MPP
Sbjct: 86   GGIYAHPPMPP 96


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