BLASTX nr result

ID: Coptis23_contig00007583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007583
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...    86   4e-23
emb|CAN69125.1| hypothetical protein VITISV_008194 [Vitis vinifera]    86   3e-22
ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-l...    82   7e-20
ref|NP_001067245.1| Os12g0609800 [Oryza sativa Japonica Group] g...    77   9e-20
gb|EEE53585.1| hypothetical protein OsJ_36827 [Oryza sativa Japo...    77   9e-20

>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score = 85.5 bits (210), Expect(2) = 4e-23
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -1

Query: 189 IYEPHSDAGISALAFHPAHDMAVSSSFGGDFKVWVHSSNIWKKDQVPSTSGWRCHSEKTY 10
           IYEPH DAGISA+AFHP   MAVSSS+GGDFK+W  S  I ++DQ    SGW CH+  +Y
Sbjct: 476 IYEPHRDAGISAIAFHPTRHMAVSSSYGGDFKIWACSHEIQQRDQTLQNSGWTCHAVGSY 535



 Score = 47.4 bits (111), Expect(2) = 4e-23
 Identities = 20/30 (66%), Positives = 24/30 (80%)
 Frame = -2

Query: 272 KLPEEGIGGLVCLKFWDSGSRKGEFILKSM 183
           K PEEG+GGLVCLKFW SGS+   FIL ++
Sbjct: 446 KFPEEGLGGLVCLKFWTSGSQSKGFILSTI 475


>emb|CAN69125.1| hypothetical protein VITISV_008194 [Vitis vinifera]
          Length = 407

 Score = 85.5 bits (210), Expect(2) = 3e-22
 Identities = 37/60 (61%), Positives = 44/60 (73%)
 Frame = -1

Query: 189 IYEPHSDAGISALAFHPAHDMAVSSSFGGDFKVWVHSSNIWKKDQVPSTSGWRCHSEKTY 10
           IYEPH DAGISA+AFHP   MAVSSS+GGDFK+W  S  I ++DQ    SGW CH+  +Y
Sbjct: 68  IYEPHRDAGISAIAFHPTRHMAVSSSYGGDFKIWACSHEIQQRDQTLQNSGWTCHAVGSY 127



 Score = 44.3 bits (103), Expect(2) = 3e-22
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 272 KLPEEGIGGLVCLKFWDSGSRKGEFILKSM 183
           K PE G+GGLVCLKFW SGS+   FIL ++
Sbjct: 38  KFPEVGLGGLVCLKFWASGSQSKGFILSTI 67


>ref|XP_003541278.1| PREDICTED: WD repeat-containing protein 75-like [Glycine max]
          Length = 802

 Score = 82.4 bits (202), Expect(2) = 7e-20
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = -1

Query: 189 IYEPHSDAGISALAFHPAHDMAVSSSFGGDFKVWVHSSNIWKKDQVPSTSGWRCHSEKTY 10
           IYEPH DA ISA+AFHP   MAVS+S+GGDFK+WV    I +K Q+  +SGWRCH+  +Y
Sbjct: 473 IYEPHRDAHISAVAFHPTRPMAVSTSYGGDFKIWVCREEIQQKGQMVRSSGWRCHAVGSY 532



 Score = 39.7 bits (91), Expect(2) = 7e-20
 Identities = 15/22 (68%), Positives = 17/22 (77%)
 Frame = -2

Query: 272 KLPEEGIGGLVCLKFWDSGSRK 207
           KLPE+GIGG +CLKFWD    K
Sbjct: 444 KLPEDGIGGFICLKFWDLDDNK 465


>ref|NP_001067245.1| Os12g0609800 [Oryza sativa Japonica Group]
           gi|77556563|gb|ABA99359.1| transducin family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649752|dbj|BAF30264.1| Os12g0609800 [Oryza sativa
           Japonica Group]
          Length = 797

 Score = 77.4 bits (189), Expect(2) = 9e-20
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = -1

Query: 189 IYEPHSDAGISALAFHPAHDMAVSSSFGGDFKVWVHSSNIWKKDQVPSTSGWRCHSEKTY 10
           IYEPHSDAGISA+AF P  +MAVSSSFGG+FKVWV S      D+  + SGWRC S  +Y
Sbjct: 469 IYEPHSDAGISAIAFRPGKNMAVSSSFGGNFKVWVQSMLSQPSDE-KNQSGWRCQSVGSY 527



 Score = 44.3 bits (103), Expect(2) = 9e-20
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -2

Query: 272 KLPEEGIGGLVCLKFWDSGSRKGEFILKSM 183
           KLPEE +GGLV LKFW+ GSR G++ L ++
Sbjct: 439 KLPEEELGGLVTLKFWNQGSRAGQYFLSTV 468


>gb|EEE53585.1| hypothetical protein OsJ_36827 [Oryza sativa Japonica Group]
          Length = 797

 Score = 77.4 bits (189), Expect(2) = 9e-20
 Identities = 38/60 (63%), Positives = 44/60 (73%)
 Frame = -1

Query: 189 IYEPHSDAGISALAFHPAHDMAVSSSFGGDFKVWVHSSNIWKKDQVPSTSGWRCHSEKTY 10
           IYEPHSDAGISA+AF P  +MAVSSSFGG+FKVWV S      D+  + SGWRC S  +Y
Sbjct: 469 IYEPHSDAGISAIAFRPGKNMAVSSSFGGNFKVWVQSMLSQPSDE-KNQSGWRCQSVGSY 527



 Score = 44.3 bits (103), Expect(2) = 9e-20
 Identities = 18/30 (60%), Positives = 24/30 (80%)
 Frame = -2

Query: 272 KLPEEGIGGLVCLKFWDSGSRKGEFILKSM 183
           KLPEE +GGLV LKFW+ GSR G++ L ++
Sbjct: 439 KLPEEELGGLVTLKFWNQGSRAGQYFLSTV 468


Top