BLASTX nr result

ID: Coptis23_contig00007582 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007582
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [...   155   4e-36
ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|2...   152   2e-35
emb|CAN69125.1| hypothetical protein VITISV_008194 [Vitis vinifera]   152   4e-35
ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|NP_001067245.1| Os12g0609800 [Oryza sativa Japonica Group] g...   141   6e-32

>ref|XP_002266770.1| PREDICTED: WD repeat-containing protein 75 [Vitis vinifera]
           gi|296087114|emb|CBI33488.3| unnamed protein product
           [Vitis vinifera]
          Length = 815

 Score =  155 bits (391), Expect = 4e-36
 Identities = 69/97 (71%), Positives = 81/97 (83%)
 Frame = -2

Query: 293 KLPEEGIGGLVCLKFWDSGSRKGEFILSTVIYEPHSDAGISALAFHPTRDMAVSSSFGGD 114
           K PEEG+GGLVCLKFW SGS+   FILST+IYEPH DAGISA+AFHPTR MAVSSS+GGD
Sbjct: 446 KFPEEGLGGLVCLKFWTSGSQSKGFILSTIIYEPHRDAGISAIAFHPTRHMAVSSSYGGD 505

Query: 113 FKVWVRSSNIRKKDQVPSKSGWRCHSVGSYKKRPMTA 3
           FK+W  S  I+++DQ    SGW CH+VGSYK++PMTA
Sbjct: 506 FKIWACSHEIQQRDQTLQNSGWTCHAVGSYKRKPMTA 542


>ref|XP_002329663.1| predicted protein [Populus trichocarpa] gi|222870544|gb|EEF07675.1|
           predicted protein [Populus trichocarpa]
          Length = 812

 Score =  152 bits (385), Expect = 2e-35
 Identities = 69/97 (71%), Positives = 82/97 (84%)
 Frame = -2

Query: 293 KLPEEGIGGLVCLKFWDSGSRKGEFILSTVIYEPHSDAGISALAFHPTRDMAVSSSFGGD 114
           KLPEEG+GGLVCLKFW  GS+  EF LST++YEPH DAGISA+AFHPTR MAVSSS+GGD
Sbjct: 448 KLPEEGLGGLVCLKFWALGSQNKEFSLSTIVYEPHRDAGISAIAFHPTRPMAVSSSYGGD 507

Query: 113 FKVWVRSSNIRKKDQVPSKSGWRCHSVGSYKKRPMTA 3
           FKVWV ++ I++ D+    SGW CH+VGSYKK+PMTA
Sbjct: 508 FKVWVCNNGIQEMDKPLPNSGWTCHAVGSYKKKPMTA 544


>emb|CAN69125.1| hypothetical protein VITISV_008194 [Vitis vinifera]
          Length = 407

 Score =  152 bits (383), Expect = 4e-35
 Identities = 68/97 (70%), Positives = 80/97 (82%)
 Frame = -2

Query: 293 KLPEEGIGGLVCLKFWDSGSRKGEFILSTVIYEPHSDAGISALAFHPTRDMAVSSSFGGD 114
           K PE G+GGLVCLKFW SGS+   FILST+IYEPH DAGISA+AFHPTR MAVSSS+GGD
Sbjct: 38  KFPEVGLGGLVCLKFWASGSQSKGFILSTIIYEPHRDAGISAIAFHPTRHMAVSSSYGGD 97

Query: 113 FKVWVRSSNIRKKDQVPSKSGWRCHSVGSYKKRPMTA 3
           FK+W  S  I+++DQ    SGW CH+VGSYK++PMTA
Sbjct: 98  FKIWACSHEIQQRDQTLQNSGWTCHAVGSYKRKPMTA 134


>ref|XP_002324467.1| predicted protein [Populus trichocarpa] gi|222865901|gb|EEF03032.1|
           predicted protein [Populus trichocarpa]
          Length = 811

 Score =  147 bits (371), Expect = 9e-34
 Identities = 68/97 (70%), Positives = 81/97 (83%)
 Frame = -2

Query: 293 KLPEEGIGGLVCLKFWDSGSRKGEFILSTVIYEPHSDAGISALAFHPTRDMAVSSSFGGD 114
           KLPEEG+GGLVCLKFW  GS+K EF L+T++YEPH DAGISA+AFHPTR MAVSSS+GGD
Sbjct: 448 KLPEEGLGGLVCLKFWAFGSQK-EFSLTTIVYEPHRDAGISAIAFHPTRPMAVSSSYGGD 506

Query: 113 FKVWVRSSNIRKKDQVPSKSGWRCHSVGSYKKRPMTA 3
           FKVW+ +  IR+ D+    SGW CH+VGSYKK+ MTA
Sbjct: 507 FKVWICNKGIRQVDEPLPNSGWTCHAVGSYKKKSMTA 543


>ref|NP_001067245.1| Os12g0609800 [Oryza sativa Japonica Group]
           gi|77556563|gb|ABA99359.1| transducin family protein,
           putative, expressed [Oryza sativa Japonica Group]
           gi|113649752|dbj|BAF30264.1| Os12g0609800 [Oryza sativa
           Japonica Group]
          Length = 797

 Score =  141 bits (355), Expect = 6e-32
 Identities = 67/97 (69%), Positives = 81/97 (83%)
 Frame = -2

Query: 293 KLPEEGIGGLVCLKFWDSGSRKGEFILSTVIYEPHSDAGISALAFHPTRDMAVSSSFGGD 114
           KLPEE +GGLV LKFW+ GSR G++ LSTVIYEPHSDAGISA+AF P ++MAVSSSFGG+
Sbjct: 439 KLPEEELGGLVTLKFWNQGSRAGQYFLSTVIYEPHSDAGISAIAFRPGKNMAVSSSFGGN 498

Query: 113 FKVWVRSSNIRKKDQVPSKSGWRCHSVGSYKKRPMTA 3
           FKVWV+S   +  D+  ++SGWRC SVGSYK +PMTA
Sbjct: 499 FKVWVQSMLSQPSDE-KNQSGWRCQSVGSYKNKPMTA 534


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