BLASTX nr result
ID: Coptis23_contig00007579
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007579
(2284 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 4... 483 e-133
ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|2... 466 e-130
emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera] 461 e-127
ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 3... 460 e-127
ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 3... 434 e-122
>ref|XP_002280597.1| PREDICTED: U-box domain-containing protein 40 [Vitis vinifera]
Length = 519
Score = 483 bits (1242), Expect = e-133
Identities = 274/507 (54%), Positives = 332/507 (65%), Gaps = 10/507 (1%)
Frame = +2
Query: 296 PPKEFICSISGSMMADPVIVTSGQTFEGNCVHVCKNLGFTPLLSDGTRPDLTSLIPNIAF 475
PPKEF+C ISGS+MADPVIV+SGQTFE CV VCK LGF P LS+G+ PD +++IPN+A
Sbjct: 28 PPKEFLCPISGSLMADPVIVSSGQTFERACVQVCKALGFNPTLSEGSSPDFSTIIPNLAI 87
Query: 476 KSTILNWCDTHRVDRPVPIAVNVAEKLVMDLMEVQXXXXXXXXXXXXXXXXXXXX----- 640
+STIL+WCD VDRP P+ + AEK+V LM Q
Sbjct: 88 QSTILSWCDKCSVDRPKPLDFDSAEKVVRTLMASQKAENKSEDSDKELIKAVGETPPVLK 147
Query: 641 -----TELTRCSQPSHFYSSSEESVITTIPTTPLPFSTRPACYXXXXXXXXXXXXXXDEA 805
T+L R S +HFYSSS+ESV TT T PLP +TRP+CY +
Sbjct: 148 FAHAITDLNRRS--THFYSSSQESVTTTGSTPPLPLATRPSCYSSSSSS--------EIE 197
Query: 806 LLNSDSCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMX 985
LN DS E+E I+ KLKS QVFEQEE +VSLRK+TR EE RV LC+PRLLS LRSL+
Sbjct: 198 TLNPDSPEEDEGIIAKLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLII 257
Query: 986 XXXXXXXXXXXXXXXXISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLAL 1165
+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGALFSLAL
Sbjct: 258 SRYSGIQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLAL 317
Query: 1166 DDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLS 1345
+D NK AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGAV +L+
Sbjct: 318 EDANKTAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMG 377
Query: 1346 LVKVGELASRALLILCNLAVCDEGRSVMLDENAVGCFFGMLKDGDLKSASSVRENCVAAL 1525
+V G L SRALL+LCNLA C +GR+ MLD AV C G+L+ +L S S+RE+C+AAL
Sbjct: 378 MVNSGHLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRESCLAAL 436
Query: 1526 YSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXXRTGREGDEEIDWE 1705
Y+LS G RFK LAK+AGA E L+ V + GS+R +T +E +DWE
Sbjct: 437 YALSFGGSRFKGLAKEAGAMETLMRVEKIGSERAREKAKKILEIMREKT----EEGLDWE 492
Query: 1706 SVMNSGVVSRIHQYRLGVGDCANSTGF 1786
++++SG+VSR + L NS+ F
Sbjct: 493 ALLDSGLVSRTRYWPLQDRSSVNSSEF 519
>ref|XP_002321563.1| predicted protein [Populus trichocarpa] gi|222868559|gb|EEF05690.1|
predicted protein [Populus trichocarpa]
Length = 537
Score = 466 bits (1200), Expect(2) = e-130
Identities = 271/514 (52%), Positives = 334/514 (64%), Gaps = 17/514 (3%)
Frame = +2
Query: 296 PPKEFICSISGSMMADPVIVTSGQTFEGNCVHVCKNLGFTPLLSDGTRPDLTSLIPNIAF 475
PPKEFIC ISGS+M DPV+V+SGQTFE V VC +LGF P L D + PD T++IPN+A
Sbjct: 29 PPKEFICPISGSLMFDPVVVSSGQTFERLSVQVCHDLGFIPTLQDNSLPDFTNVIPNLAI 88
Query: 476 KSTILNWCDTHRVDRPVPIAVNVAEKLVMDLME------VQXXXXXXXXXXXXXXXXXXX 637
K+TI NWCD+ P + E+++ + M+ V
Sbjct: 89 KTTIQNWCDSSGTQHPPAPDYSSLEEIIREKMKFSPDIRVSERELLKAVAENPPVLFSHA 148
Query: 638 XTELTRCSQPSHFYSSS-EESVITTI-------PTTPLPFSTRPACYXXXXXXXXXXXXX 793
TEL + +HFYSSS EESVI P TPLP +TRPACY
Sbjct: 149 NTELPH--RVNHFYSSSSEESVIVNTAATPSASPLTPLPLATRPACYSSTSSSSNSIAES 206
Query: 794 XDEALLNSDSCS-EEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSAL 970
+ + S EE+EIV KLKS V +QE+G++SLRK+TR +EE RV LCTPRLLSAL
Sbjct: 207 ETLTVTENPKLSREEDEIVEKLKSLDVRDQEQGLISLRKITRTKEETRVSLCTPRLLSAL 266
Query: 971 RSLMXXXXXXXXXXXXXXXXXISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGAL 1150
R+L +SLEK NKVKIVR G +P+LIDVLKGGF+EAQEHAAGAL
Sbjct: 267 RTLFPSRYFSVQTNAIASLVNLSLEKVNKVKIVRSGFIPLLIDVLKGGFDEAQEHAAGAL 326
Query: 1151 FSLALDDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAV 1330
FSLAL+D+NKMAIGVLGAL+PL+HMLR +SERAR+DS+LALYHLSL+ SNRVKLVKLGAV
Sbjct: 327 FSLALEDENKMAIGVLGALQPLMHMLRAESERARHDSSLALYHLSLIQSNRVKLVKLGAV 386
Query: 1331 SVLLSLVKVGELASRALLILCNLAVCDEGRSVMLDENAVGCFFGMLKDGDLKSASSVREN 1510
S+LLS+VK G+LASR LL+LCNLA C+EGRS MLD NAV G+L++G + +REN
Sbjct: 387 SMLLSMVKSGDLASRLLLVLCNLAACNEGRSAMLDANAVAILVGILREGGGGDSEVIREN 446
Query: 1511 CVAALYSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXXRTGREGDE 1690
CVAAL++LS GS+RFK LAK+A A EVL E+ E+GS+R R E DE
Sbjct: 447 CVAALFALSHGSMRFKGLAKEARAVEVLREIEERGSNRAREKAKRILMMMRGRD--EEDE 504
Query: 1691 EIDWESVMNSGVVSRIHQYRLGVGDC--ANSTGF 1786
+I WE V+ SG +SR +YR G + NST F
Sbjct: 505 DICWEEVLESGGISRT-RYRAGGRNLPGPNSTNF 537
Score = 26.6 bits (57), Expect(2) = e-130
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 133 MGSGGKKRWKFSFH 174
MG GK+RWK SF+
Sbjct: 1 MGGNGKRRWKISFY 14
>emb|CAN81267.1| hypothetical protein VITISV_006142 [Vitis vinifera]
Length = 543
Score = 461 bits (1186), Expect = e-127
Identities = 259/450 (57%), Positives = 306/450 (68%), Gaps = 10/450 (2%)
Frame = +2
Query: 296 PPKEFICSISGSMMADPVIVTSGQTFEGNCVHVCKNLGFTPLLSDGTRPDLTSLIPNIAF 475
PPKEF+C ISGS+MADPVIV+SGQTFE CV VCK LGF P LS+G+ PD +++IPN+A
Sbjct: 56 PPKEFLCPISGSLMADPVIVSSGQTFERACVQVCKALGFNPTLSEGSSPDFSTIIPNLAI 115
Query: 476 KSTILNWCDTHRVDRPVPIAVNVAEKLVMDLMEVQXXXXXXXXXXXXXXXXXXXX----- 640
+STIL+WCD VDRP P+ + AEK+V LM Q
Sbjct: 116 QSTILSWCDKCSVDRPKPLDFDSAEKVVRTLMASQKAENKSEDSDKELIKAVXETPPVLK 175
Query: 641 -----TELTRCSQPSHFYSSSEESVITTIPTTPLPFSTRPACYXXXXXXXXXXXXXXDEA 805
T+L R S +HFYSSS+ESV TT T PLP +TRP+CY +
Sbjct: 176 FAHAITDLNRRS--THFYSSSQESVTTTGSTPPLPLATRPSCYSSSSSS--------EIE 225
Query: 806 LLNSDSCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMX 985
LN DS E+E I+ KLKS QVFEQEE +VSLRK+TR EE RV LC+PRLLS LRSL+
Sbjct: 226 TLNPDSPEEDEGIIAKLKSPQVFEQEEALVSLRKITRTGEETRVSLCSPRLLSMLRSLII 285
Query: 986 XXXXXXXXXXXXXXXXISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLAL 1165
+SLEK NKVKIVR GIVP LIDVLKGGF EAQ+HAAGALFSLAL
Sbjct: 286 SRYSGIQVNAVAVLVNLSLEKINKVKIVRSGIVPPLIDVLKGGFPEAQDHAAGALFSLAL 345
Query: 1166 DDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLS 1345
+D NK AIGVLGAL PL+H LR +SERARNDSALALYHLSLV SNR KLVKLGAV +L+
Sbjct: 346 EDANKTAIGVLGALPPLLHTLRSESERARNDSALALYHLSLVQSNRTKLVKLGAVQILMG 405
Query: 1346 LVKVGELASRALLILCNLAVCDEGRSVMLDENAVGCFFGMLKDGDLKSASSVRENCVAAL 1525
+V G L SRALL+LCNLA C +GR+ MLD AV C G+L+ +L S S+RE+C+AAL
Sbjct: 406 MVNSGHLWSRALLVLCNLAACPDGRTAMLDAGAVECLVGLLRGNELDS-DSIRESCLAAL 464
Query: 1526 YSLSLGSLRFKSLAKDAGAREVLVEVAEKG 1615
Y+LS G RFK LAK+AGA E L+ V + G
Sbjct: 465 YALSFGGSRFKGLAKEAGAMETLMRVEKIG 494
>ref|XP_002283638.1| PREDICTED: U-box domain-containing protein 38-like [Vitis vinifera]
Length = 523
Score = 460 bits (1184), Expect = e-127
Identities = 266/499 (53%), Positives = 324/499 (64%), Gaps = 13/499 (2%)
Frame = +2
Query: 299 PKEFICSISGSMMADPVIVTSGQTFEGNCVHVCKNLGFTPLLSDGTRPDLTSLIPNIAFK 478
PKEF+C ISGS+MADPV+V SGQTFE V VC+NL F P+L DG+RPD T +IPN+A K
Sbjct: 24 PKEFMCPISGSLMADPVVVASGQTFERISVQVCRNLAFVPVLGDGSRPDFTVVIPNLAMK 83
Query: 479 STILNWCDTHRVDRPVPIAVNVAEKLVM--------DLMEVQXXXXXXXXXXXXXXXXXX 634
S ILNWC RVDRP E LV D E
Sbjct: 84 SAILNWCAASRVDRPTEPEYGSVETLVRAAMGSDGDDRFETSEKELLRAVPGNPPVMFSH 143
Query: 635 XXTELTRCSQPSHFYSSS-EESVITTIPTTPLPFSTRPACYXXXXXXXXXXXXXXDEALL 811
TE+ +P+HFYSSS EESVI +P TPLP +TRP+CY DEAL
Sbjct: 144 AATEVNH--RPNHFYSSSSEESVIAAVPATPLPLTTRPSCYSSFSSSS-------DEALS 194
Query: 812 NSDSC----SEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSL 979
+ + SEEEEI+ KLKS++V EQEEG++ LR +TR +E+LRV LCTP +LSALR L
Sbjct: 195 LAVTLDPISSEEEEILGKLKSSEVHEQEEGLILLRTITRTKEDLRVSLCTPGVLSALRLL 254
Query: 980 MXXXXXXXXXXXXXXXXXISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSL 1159
+ +SLEK NK KIVR GIVP LID+LKGG E+QEHAAGALFSL
Sbjct: 255 LNSRYGVVQTNAVASVVNLSLEKPNKAKIVRSGIVPPLIDLLKGGLPESQEHAAGALFSL 314
Query: 1160 ALDDDNKMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVL 1339
A++D+NK AIGV+GAL PL+H LR +SER R+DSALALYHLSL SNRVKLVKLGA+ L
Sbjct: 315 AIEDNNKTAIGVMGALPPLLHSLRSESERTRHDSALALYHLSLDQSNRVKLVKLGAIPTL 374
Query: 1340 LSLVKVGELASRALLILCNLAVCDEGRSVMLDENAVGCFFGMLKDGDLKSASSVRENCVA 1519
L++VK G+LASRALLILCN+A +GRS MLD NAV C G+L+ +L S S +ENCVA
Sbjct: 375 LAMVKSGDLASRALLILCNMAASGDGRSAMLDANAVDCLVGLLRGKELDS-ESTQENCVA 433
Query: 1520 ALYSLSLGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXXRTGREGDEEID 1699
LY LS GS+RFK LA++A A EVL EV E+GS R GR+ +EE+D
Sbjct: 434 VLYLLSHGSMRFKGLAREARAVEVLREVEERGSGR---AREKAKRMLQMMRGRDEEEEVD 490
Query: 1700 WESVMNSGVVSRIHQYRLG 1756
WE V+ SG +S+ +YR+G
Sbjct: 491 WEGVLESGALSQ-PRYRVG 508
>ref|XP_003523065.1| PREDICTED: U-box domain-containing protein 38-like [Glycine max]
Length = 525
Score = 434 bits (1116), Expect(2) = e-122
Identities = 261/508 (51%), Positives = 318/508 (62%), Gaps = 12/508 (2%)
Frame = +2
Query: 299 PKEFICSISGSMMADPVIVTSGQTFEGNCVHVCKNLGFTPLLSDGTRPDLTSLIPNIAFK 478
PKEF C ISGS+M+DPV+V SGQTFE V +CK+L F+P L DGTRPD +++IPN+A K
Sbjct: 29 PKEFTCPISGSLMSDPVVVASGQTFERLAVQLCKDLNFSPKLDDGTRPDFSTIIPNLAIK 88
Query: 479 STILNWCDTHRVDRPVPIAVNVAEKLV------MDLMEVQXXXXXXXXXXXXXXXXXXXX 640
+TIL+WCD R P+P E+ V DL+ V
Sbjct: 89 TTILHWCDNSRTQPPLPPDYASLERHVREEKEKQDLIRVSEKELLNAVADNPPVIFSHAA 148
Query: 641 TELTRCSQPSHFYSSSEESVITT-IPTTPLPFSTRPACYXXXXXXXXXXXXXXDEALLNS 817
TEL + SSSEESVI P TPLP + RP C+ N+
Sbjct: 149 TELGPRVNHFNSGSSSEESVIIPPSPGTPLPLTIRPTCFSSSSSSCEIEIENP-----NT 203
Query: 818 DSCSEEEEIVMKLKSTQVFEQEEGVVSLRKLTRMREELRVLLCTPRLLSALRSLMXXXXX 997
+ EEE I+ KLKS +VFEQEEG ++LRK+TR +EE RV LCTPR+L ALR L+
Sbjct: 204 PASEEEEGILKKLKSNEVFEQEEGAIALRKITRCKEEARVSLCTPRVLLALRGLLASRYG 263
Query: 998 XXXXXXXXXXXXISLEKSNKVKIVRCGIVPVLIDVLKGGFNEAQEHAAGALFSLALDDDN 1177
+SLEK NK+KIVR G VP LIDVLKGG E+QEHAAGALFSLALDDDN
Sbjct: 264 VVQVNAVASLVNLSLEKQNKLKIVRSGFVPFLIDVLKGGLGESQEHAAGALFSLALDDDN 323
Query: 1178 KMAIGVLGALEPLVHMLRCDSERARNDSALALYHLSLVNSNRVKLVKLGAVSVLLSLVKV 1357
KMAIGVLGAL PL+H LR +SER R+DSALALYHLSLV SNR+KLVKLGAV LLS+V
Sbjct: 324 KMAIGVLGALHPLMHALRAESERTRHDSALALYHLSLVQSNRLKLVKLGAVPTLLSMVVA 383
Query: 1358 GELASRALLILCNLAVCDEGRSVMLDENAVGCFFGMLKDGDLKSASSVRENCVAALYSLS 1537
G LASR LLILCNLAVC EGR+ MLD NAV G+L+ +L S ++ RENCVAALY+LS
Sbjct: 384 GNLASRVLLILCNLAVCTEGRTAMLDANAVEILVGLLRGNELDSEAN-RENCVAALYALS 442
Query: 1538 LGSLRFKSLAKDAGAREVLVEVAEKGSDRXXXXXXXXXXXXXXRTGREGD-EEIDWESVM 1714
SLRFK LAKDA EVL E+ + G++R RT +GD +EID E
Sbjct: 443 HRSLRFKGLAKDARVVEVLKEIEQTGTER--ARERARKVLHMMRTVGDGDGDEID-EFYD 499
Query: 1715 NSGVVSRIHQYRLGV----GDCANSTGF 1786
++G+ ++YR+G + N+T F
Sbjct: 500 SAGLTR--NRYRVGAARNNNNLVNTTTF 525
Score = 34.3 bits (77), Expect(2) = e-122
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +1
Query: 133 MGSGGKKRWKFSFHRTPSSNTS 198
MG GK RWKFSFHR+ SS TS
Sbjct: 1 MGGNGKHRWKFSFHRS-SSQTS 21