BLASTX nr result

ID: Coptis23_contig00007570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007570
         (867 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266...   117   3e-24
ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263...   109   9e-22
ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [...   106   6e-21
ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|2...   103   4e-20
ref|XP_002515381.1| conserved hypothetical protein [Ricinus comm...   100   3e-19

>ref|XP_002278130.1| PREDICTED: uncharacterized protein LOC100266820 [Vitis vinifera]
          Length = 156

 Score =  117 bits (293), Expect = 3e-24
 Identities = 65/123 (52%), Positives = 76/123 (61%), Gaps = 1/123 (0%)
 Frame = +2

Query: 155 RTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNF 334
           RT  TLN+   + + +++ PHSPWHSPVPY                    CSYWKLSG  
Sbjct: 3   RTGGTLNATAATPAASVQ-PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYL 61

Query: 335 DSEENQ-ERDLENGDEKSGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSN 511
           + +++   RD E GD   GD V K P  FEEKI+VIMAGDVKPTYLATPMSSRASSFG  
Sbjct: 62  EGDDDSVARDAEAGDGAGGDAV-KPPMAFEEKILVIMAGDVKPTYLATPMSSRASSFGER 120

Query: 512 SIN 520
           S N
Sbjct: 121 SSN 123


>ref|XP_002263122.1| PREDICTED: uncharacterized protein LOC100263835 [Vitis vinifera]
          Length = 171

 Score =  109 bits (272), Expect = 9e-22
 Identities = 64/124 (51%), Positives = 74/124 (59%), Gaps = 3/124 (2%)
 Frame = +2

Query: 152 MRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLS-G 328
           MRT AT N+   S +   R   SPWHSPVPY                    CSYW+ S G
Sbjct: 1   MRTGATFNATAASPATVQR---SPWHSPVPYLFGGLAAMLGLIAFALLILACSYWRFSNG 57

Query: 329 NFDS-EENQERDLENGDEKSGDDVMKAPPV-FEEKIVVIMAGDVKPTYLATPMSSRASSF 502
           + D+ E   ERDLE+GD+  G D  K  PV +EEKIVVIMAGD KP +LATPMSSRASSF
Sbjct: 58  HLDNGESGGERDLESGDDGKGGDARKVGPVVYEEKIVVIMAGDEKPRFLATPMSSRASSF 117

Query: 503 GSNS 514
           G N+
Sbjct: 118 GDNN 121


>ref|XP_004146296.1| PREDICTED: protein GLUTAMINE DUMPER 1-like [Cucumis sativus]
          Length = 179

 Score =  106 bits (265), Expect = 6e-21
 Identities = 60/118 (50%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
 Frame = +2

Query: 176 SPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDSEE--N 349
           +P     Q  +  HSPWHSPVPY                    CSYWKLSG  D  +  N
Sbjct: 16  APVAHHQQLQQQQHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLDGSDAAN 75

Query: 350 QERDLENGDEKSGDDVMK-APPVFEEKIVVIMAGDVKPTYLATPMSSRASSFGSNSIN 520
           +E DLE G     DD  K A PVFEEKI+VIMAG++KPTYLATPMSSR+SSFG    N
Sbjct: 76  REPDLEAG----ADDTQKQASPVFEEKILVIMAGEMKPTYLATPMSSRSSSFGDTKSN 129


>ref|XP_002331665.1| predicted protein [Populus trichocarpa] gi|222874084|gb|EEF11215.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  103 bits (258), Expect = 4e-20
 Identities = 55/98 (56%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
 Frame = +2

Query: 212 PHSPWHSPVPYXXXXXXXXXXXXXXXXXXXXCSYWKLSGNFDS-EENQERDLE--NGDEK 382
           PHSPWHSPVPY                    CSYWKLSG  +S  E  ERDLE   G+ K
Sbjct: 12  PHSPWHSPVPYLFGGLAAMLGLIAFALLILACSYWKLSGYLESGNEGGERDLEAGEGENK 71

Query: 383 SGDDVMKAPPVFEEKIVVIMAGDVKPTYLATPMSSRAS 496
           SGD   K P  FEEKI+VIMAG+VKPT+LATPMSSR++
Sbjct: 72  SGDGSEKKPIAFEEKILVIMAGEVKPTFLATPMSSRST 109


>ref|XP_002515381.1| conserved hypothetical protein [Ricinus communis]
           gi|223545325|gb|EEF46830.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  100 bits (250), Expect = 3e-19
 Identities = 63/134 (47%), Positives = 73/134 (54%), Gaps = 4/134 (2%)
 Frame = +2

Query: 125 PFFVKLYIQMRTVATLNSPPPSSSQALRVPHSPWHSPVPYXXXXXXXXXXXXXXXXXXXX 304
           P  + +     T ATL+  PP  SQ  R   SPWHSPVPY                    
Sbjct: 3   PIRILINAAATTEATLS--PPLISQPQR---SPWHSPVPYLFGGLAAMLGLIAFALLILA 57

Query: 305 CSYWKLSGNFDSEENQER--DLENGDEKSGDDVMKA--PPVFEEKIVVIMAGDVKPTYLA 472
           CSYW+LSG  D+ E      DLENG+EK G     A    V+EEKI+VIMAGD KPT+LA
Sbjct: 58  CSYWRLSGRVDNREGSHGGDDLENGNEKEGGANKAAGNDKVYEEKILVIMAGDQKPTFLA 117

Query: 473 TPMSSRASSFGSNS 514
           TP+SSRA SFG  S
Sbjct: 118 TPVSSRAPSFGDKS 131


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