BLASTX nr result

ID: Coptis23_contig00007563 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007563
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22103.3| unnamed protein product [Vitis vinifera]              201   1e-49
ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|2...   182   1e-43
gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]      178   1e-42
dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]    135   2e-29
ref|NP_001042575.1| Os01g0246500 [Oryza sativa Japonica Group] g...   129   7e-28

>emb|CBI22103.3| unnamed protein product [Vitis vinifera]
          Length = 291

 Score =  201 bits (512), Expect = 1e-49
 Identities = 112/278 (40%), Positives = 164/278 (58%), Gaps = 30/278 (10%)
 Frame = +2

Query: 41  NESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEIQKD 220
           ++SL+FD +S CF++PI++AA  LGVC+S+LKK+CR+NGL RWPYRKF +G +VEEI+K 
Sbjct: 10  DKSLSFDDVSNCFSLPISEAANALGVCTSVLKKICRENGLQRWPYRKFQSGTSVEEIKKY 69

Query: 221 AAREKKREMIELARAARQKDXXXXXXXXXXX--------------------------IFQ 322
           AARE+ +E+ +L++   Q +                                     + Q
Sbjct: 70  AARERNKELAQLSKVDVQGNDALTSSAVSAAFGSQPQNDTKSSLWKMSKLHGAIPPHMLQ 129

Query: 323 HQGNSVSQDGLTNDTPHASLLRNIAY-LDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEI 499
            QG+   Q+G   + P+ASL + IA  LDEFK GFPT+GLAT + +WWG    DG E  I
Sbjct: 130 QQGSRNIQNGRPQNLPNASLSKGIAASLDEFKYGFPTSGLATASNKWWGSSSPDGYEGTI 189

Query: 500 FGEEPAVDEVSKQQPHDLADNDVEFIE---EETDPLAKKIDMGPQGAALLSSVRKAATAK 670
            G    +DE  K+Q   LADN    +    E+ +   ++  +GPQG  LL++VRK    +
Sbjct: 190 -GNGVEIDEEDKKQSEQLADNGANLLVMDGEKAENEKEEGTIGPQGTGLLTAVRKTTVEE 248

Query: 671 GREALKLGVFGDHGLFKPDRQEKLMLLKVFKSSMSCQW 784
           GR+ LK+GV  DHG+ K  ++E+ +LL++F SS+  QW
Sbjct: 249 GRKILKIGVGRDHGVLKAGKKERRLLLQIFGSSLPSQW 286


>ref|XP_002300875.1| predicted protein [Populus trichocarpa] gi|222842601|gb|EEE80148.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  182 bits (461), Expect = 1e-43
 Identities = 106/255 (41%), Positives = 154/255 (60%), Gaps = 6/255 (2%)
 Frame = +2

Query: 38  PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEI 211
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CRDNGL RWPYRK+LAGK++E+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRDNGLDRWPYRKYLAGKSIEDI 68

Query: 212 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXXIFQHQGNSVSQDGLTNDTPHASLLR 388
           ++ AAREK + + +LA+AA +                Q QG      G  + T    L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHITLTPGLAK 128

Query: 389 NIAYLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 565
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGRQSEEKVDAGTS 188

Query: 566 VEFIEEETDPLAK--KIDMGPQGAALLSSVRKAATAKGREALKLGVFGDHGLFKPDRQEK 739
           V  ++EE     K    ++ PQG  LL+SVRK A  +GREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAAEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 740 LMLLKVFKSSMSCQW 784
            +LL++F SS+  QW
Sbjct: 249 ALLLRIFGSSLPKQW 263


>gb|ABK96557.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 274

 Score =  178 bits (452), Expect = 1e-42
 Identities = 107/264 (40%), Positives = 156/264 (59%), Gaps = 6/264 (2%)
 Frame = +2

Query: 38  PNESL--TFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEI 211
           PN+S   +++ +SK F++P++DAA NLGVC S+LKK+CR+NGL RWPYRK+LAGK++E+I
Sbjct: 9   PNQSKPPSWEAISKHFSLPLSDAANNLGVCVSVLKKICRENGLDRWPYRKYLAGKSIEDI 68

Query: 212 QKDAAREKKREMIELARAARQKD-XXXXXXXXXXXIFQHQGNSVSQDGLTNDTPHASLLR 388
           ++ AAREK + + +LA+AA +                Q QG      G  +      L +
Sbjct: 69  RRYAAREKIKAIADLAKAANKSGIQQQNNENSKPHKLQQQGTKDVLVGRQHIMLTPGLAK 128

Query: 389 NIAYLDEFKQGFPTTGLATVTMRWWGGRGSDGNE-DEIFGEEPAVDEVSKQQPHDLADND 565
            +  LDEFK GFP+ GL+T T +WWG   SD     +  G E   D+  + +    A   
Sbjct: 129 GLMGLDEFKYGFPSDGLSTATNKWWGSSLSDTQRATDRAGIETDEDDGHQSEEKVDAGTS 188

Query: 566 VEFIEEETDPLAK--KIDMGPQGAALLSSVRKAATAKGREALKLGVFGDHGLFKPDRQEK 739
           V  ++EE     K    ++ PQG  LL+SVRK A  +GREALKLGV+  +G+ K  R+++
Sbjct: 189 VVIVDEEKGENGKMESNEIDPQGTGLLTSVRKRAVEEGREALKLGVYRTYGVNKLGRKQR 248

Query: 740 LMLLKVFKSSMSCQWKFDSF*TRV 811
            +LL++F SS+  QW  D    RV
Sbjct: 249 ALLLRIFGSSLPKQWIQDFSSNRV 272


>dbj|BAK02178.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 343

 Score =  135 bits (339), Expect = 2e-29
 Identities = 82/268 (30%), Positives = 153/268 (57%), Gaps = 17/268 (6%)
 Frame = +2

Query: 35  PPNESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEIQ 214
           P   SL+++++SK F++PIA+AA+ LGVC+S+LK++CR +G+VRWPYRK ++GK   +  
Sbjct: 81  PTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRTHGIVRWPYRKIVSGK--GDDV 138

Query: 215 KDAAREKKREMIELARAARQKD-XXXXXXXXXXXIFQ----------HQGNSVSQDGLTN 361
           K+A REK  +++EL++ A+QK              FQ            G+++ +  + +
Sbjct: 139 KNAEREKAMQLLELSKIAKQKAISSSGSLTTSSGAFQAVSKAQQGSAKAGSAIGRQNVPS 198

Query: 362 DTPHASLLRNIAYLDEFKQGFPTTGLATVTMRWWGGRGSDGNEDEIFGEEPAVD--EVSK 535
            +  +       Y+D+FK GFP++GL+T TM+WW    +D + + +  ++   +  E + 
Sbjct: 199 LSQFSQAKDIPTYMDDFKYGFPSSGLSTETMKWW---ATDSHTETVAVKDDNREGSESTN 255

Query: 536 QQPHDLADNDVEFIEEETDPLAKKIDMGPQGAALLSSVRKAATAKGREALKLGVFGDHG- 712
           +    + D+++++  +E +  A  +D     +A L S+R+ A   GR  L     GD G 
Sbjct: 256 EASKGMTDDELDWGADEPEADADGMDAATDPSAQLCSLRRKAAGDGRRLLN----GDTGR 311

Query: 713 ---LFKPDRQEKLMLLKVFKSSMSCQWK 787
              L + ++++K++L +VF +S+  QW+
Sbjct: 312 VQQLCRLNKRQKIVLAQVFGASLPEQWR 339


>ref|NP_001042575.1| Os01g0246500 [Oryza sativa Japonica Group]
           gi|113532106|dbj|BAF04489.1| Os01g0246500 [Oryza sativa
           Japonica Group]
          Length = 315

 Score =  129 bits (325), Expect = 7e-28
 Identities = 91/268 (33%), Positives = 151/268 (56%), Gaps = 22/268 (8%)
 Frame = +2

Query: 35  PPNESLTFDQMSKCFNMPIADAAANLGVCSSLLKKLCRDNGLVRWPYRKFLAGKTVEEIQ 214
           P   SL+++++SK F++PIA+AA+ LGVC+S+LK++CR +G+VRWPYRK ++GK+ ++  
Sbjct: 45  PTRVSLSYEEISKLFSLPIAEAASILGVCTSVLKRICRSHGIVRWPYRKLVSGKSGDD-T 103

Query: 215 KDAAREKKREMIELARAARQKD-XXXXXXXXXXXIFQ-----HQGNS----VSQDGLTND 364
           K+A REK + ++E+++ A+QK              FQ      QG+S    VS  G  N 
Sbjct: 104 KNAEREKAKGLLEISKVAKQKALSASGLSTVSPGAFQGVAKSQQGSSKAGQVSPPGKQNV 163

Query: 365 TPHASLL------RNI-AYLDEFKQGFPTTGLATVTMRWWG----GRGSDGNEDEIFGEE 511
              +++L      + I  Y+D+FK GFP++GL+  TM+WWG       +   +D   GE 
Sbjct: 164 LGGSAILSYGTQTKGIPTYMDDFKYGFPSSGLSLQTMKWWGTDSHTETTPAKDDN--GEA 221

Query: 512 P-AVDEVSKQQPHDLADNDVEFIEEETDPLAKKIDMGPQGAALLSSVRKAATAKGREALK 688
           P + +E SK    D  D   +  E E D  +    +  + +A L S+R+ A   GR+ L 
Sbjct: 222 PESANEASKGMTDDELDWGADEAEAEADADSA---ITTEPSAQLCSLRRKAVDDGRKLLT 278

Query: 689 LGVFGDHGLFKPDRQEKLMLLKVFKSSM 772
               G   L + ++++K+ L +VF +S+
Sbjct: 279 GKSCGGLELCRLNKRQKMALAQVFGASL 306


Top