BLASTX nr result

ID: Coptis23_contig00007562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007562
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-28
gb|ABK96041.1| unknown [Populus trichocarpa]                           80   1e-28
ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207...    75   7e-28
ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249...    77   1e-27
ref|XP_003529441.1| PREDICTED: uncharacterized protein LOC100527...    73   3e-25

>ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|222838735|gb|EEE77100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score = 79.7 bits (195), Expect(2) = 1e-28
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -2

Query: 417 PFESKLARPKARLRTDEPMRMEDLKDWTIDTLTDAFTRVEESVKSTS 277
           PFESKLARP AR+RT+EP+R +DLKDWTID LTDA TRVEESVK  S
Sbjct: 133 PFESKLARPNARIRTEEPVRTDDLKDWTIDVLTDALTRVEESVKRNS 179



 Score = 72.8 bits (177), Expect(2) = 1e-28
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 622 YDESKSQETIERKIQNAPAGQGTIRMLSREEWDEIQEVRPRT 497
           YD+S SQE IERKI+NAP GQGT+RML+REEW+E +EVRPRT
Sbjct: 91  YDDSHSQEMIERKIKNAPVGQGTVRMLTREEWEEFREVRPRT 132


>gb|ABK96041.1| unknown [Populus trichocarpa]
          Length = 108

 Score = 79.7 bits (195), Expect(2) = 1e-28
 Identities = 37/47 (78%), Positives = 41/47 (87%)
 Frame = -2

Query: 417 PFESKLARPKARLRTDEPMRMEDLKDWTIDTLTDAFTRVEESVKSTS 277
           PFESKLARP AR+RT+EP+R +DLKDWTID LTDA TRVEESVK  S
Sbjct: 62  PFESKLARPNARIRTEEPVRTDDLKDWTIDVLTDALTRVEESVKRNS 108



 Score = 72.8 bits (177), Expect(2) = 1e-28
 Identities = 32/42 (76%), Positives = 38/42 (90%)
 Frame = -1

Query: 622 YDESKSQETIERKIQNAPAGQGTIRMLSREEWDEIQEVRPRT 497
           YD+S SQE IERKI+NAP GQGT+RML+REEW+E +EVRPRT
Sbjct: 20  YDDSHSQEMIERKIKNAPVGQGTVRMLTREEWEEFREVRPRT 61


>ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]
           gi|449519980|ref|XP_004167012.1| PREDICTED:
           uncharacterized protein LOC101228588 [Cucumis sativus]
          Length = 176

 Score = 75.1 bits (183), Expect(2) = 7e-28
 Identities = 33/42 (78%), Positives = 40/42 (95%)
 Frame = -1

Query: 622 YDESKSQETIERKIQNAPAGQGTIRMLSREEWDEIQEVRPRT 497
           YDES+S+E IERKI+NAP GQGT+RMLSR+EW+EI+EVRPRT
Sbjct: 85  YDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRT 126



 Score = 74.7 bits (182), Expect(2) = 7e-28
 Identities = 36/50 (72%), Positives = 42/50 (84%), Gaps = 2/50 (4%)
 Frame = -2

Query: 417 PFESKLARPKARLRTDEPMRMEDLKDWTIDTLTDAFTRVEESVK--STSK 274
           PFESKLARP AR+RT EP+ MEDLKDWT+D L++A TR EESV+  STSK
Sbjct: 127 PFESKLARPNARIRTGEPLHMEDLKDWTVDVLSNALTRAEESVRHGSTSK 176


>ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249204 [Vitis vinifera]
           gi|296084165|emb|CBI24553.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score = 77.4 bits (189), Expect(2) = 1e-27
 Identities = 34/42 (80%), Positives = 40/42 (95%)
 Frame = -1

Query: 622 YDESKSQETIERKIQNAPAGQGTIRMLSREEWDEIQEVRPRT 497
           YD+SKS+E +ERKI+NAPAGQGT+RML+REEWD IQEVRPRT
Sbjct: 83  YDDSKSEEMVERKIKNAPAGQGTVRMLTREEWDAIQEVRPRT 124



 Score = 71.6 bits (174), Expect(2) = 1e-27
 Identities = 33/47 (70%), Positives = 38/47 (80%)
 Frame = -2

Query: 417 PFESKLARPKARLRTDEPMRMEDLKDWTIDTLTDAFTRVEESVKSTS 277
           PFESK +R  AR+RT EP+ MED+KDWT+D LTDA TRVEESVK  S
Sbjct: 125 PFESKFSRHNARIRTGEPLHMEDVKDWTLDVLTDALTRVEESVKRGS 171


>ref|XP_003529441.1| PREDICTED: uncharacterized protein LOC100527894 [Glycine max]
          Length = 167

 Score = 72.8 bits (177), Expect(2) = 3e-25
 Identities = 31/42 (73%), Positives = 39/42 (92%)
 Frame = -1

Query: 622 YDESKSQETIERKIQNAPAGQGTIRMLSREEWDEIQEVRPRT 497
           YD+S+SQE +ERKI+NAP GQG++RML+REEWDE +EVRPRT
Sbjct: 78  YDDSRSQELLERKIKNAPEGQGSVRMLTREEWDEFREVRPRT 119



 Score = 68.2 bits (165), Expect(2) = 3e-25
 Identities = 32/48 (66%), Positives = 37/48 (77%)
 Frame = -2

Query: 417 PFESKLARPKARLRTDEPMRMEDLKDWTIDTLTDAFTRVEESVKSTSK 274
           PFES LARP +R+RT EP+R+ED+KDWT D L DAF RVEE  K  SK
Sbjct: 120 PFESTLARPNSRIRTGEPLRLEDVKDWTTDVLMDAFHRVEEYGKHGSK 167


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