BLASTX nr result

ID: Coptis23_contig00007540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007540
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26279.3| unnamed protein product [Vitis vinifera]              154   9e-36
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     154   9e-36
ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   150   8e-35
ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073...   124   6e-27
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        122   2e-26

>emb|CBI26279.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/85 (84%), Positives = 78/85 (91%)
 Frame = +2

Query: 68  MDPLSALRDLTIRGELDKIVKVNDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVN 247
           MDPLSALRD T+RGELDKIV+V DEFRFGSDY FPCSAETAYRSKQGNLYTLETLVYYV 
Sbjct: 1   MDPLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVK 60

Query: 248 NHSVKHTEYLQNARLQKLSAVTLPD 322
           NH +KHTEYLQ+AR Q++ AVTLPD
Sbjct: 61  NHHIKHTEYLQSARTQRIPAVTLPD 85


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  154 bits (388), Expect = 9e-36
 Identities = 72/85 (84%), Positives = 78/85 (91%)
 Frame = +2

Query: 68  MDPLSALRDLTIRGELDKIVKVNDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVN 247
           MDPLSALRD T+RGELDKIV+V DEFRFGSDY FPCSAETAYRSKQGNLYTLETLVYYV 
Sbjct: 1   MDPLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVK 60

Query: 248 NHSVKHTEYLQNARLQKLSAVTLPD 322
           NH +KHTEYLQ+AR Q++ AVTLPD
Sbjct: 61  NHHIKHTEYLQSARTQRIPAVTLPD 85


>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/85 (83%), Positives = 76/85 (89%)
 Frame = +2

Query: 68  MDPLSALRDLTIRGELDKIVKVNDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVN 247
           MDPLSALRD TIRGELDKIV+VNDEFRF SDY FPCS ETAYRSKQGNLYTLETLVYY+ 
Sbjct: 1   MDPLSALRDFTIRGELDKIVRVNDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIK 60

Query: 248 NHSVKHTEYLQNARLQKLSAVTLPD 322
           NH VKHTEYLQNAR Q +++VT PD
Sbjct: 61  NHHVKHTEYLQNARTQGITSVTFPD 85


>ref|XP_003610782.1| Parafibromin [Medicago truncatula] gi|217073460|gb|ACJ85089.1|
           unknown [Medicago truncatula]
           gi|355512117|gb|AES93740.1| Parafibromin [Medicago
           truncatula] gi|388521181|gb|AFK48652.1| unknown
           [Medicago truncatula]
          Length = 398

 Score =  124 bits (312), Expect = 6e-27
 Identities = 57/85 (67%), Positives = 67/85 (78%)
 Frame = +2

Query: 68  MDPLSALRDLTIRGELDKIVKVNDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVN 247
           MDPL+ LRD TIRG+LDKIV++N  FRFG DY FPCS ETAYRS +GN YTLETLV+Y+ 
Sbjct: 8   MDPLTLLRDFTIRGDLDKIVRLNGNFRFGEDYTFPCSLETAYRSTKGNRYTLETLVHYIK 67

Query: 248 NHSVKHTEYLQNARLQKLSAVTLPD 322
           NH +KHTEY QN     + +VTLPD
Sbjct: 68  NHHLKHTEYFQNTLALGIPSVTLPD 92


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  122 bits (307), Expect = 2e-26
 Identities = 56/85 (65%), Positives = 69/85 (81%)
 Frame = +2

Query: 68  MDPLSALRDLTIRGELDKIVKVNDEFRFGSDYIFPCSAETAYRSKQGNLYTLETLVYYVN 247
           MDPLSALR+ T+RGE++KIV+VN EFRFG +Y FPC  ETAYRS +GN YTLETLV+Y+ 
Sbjct: 1   MDPLSALREFTMRGEVEKIVRVNAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQ 60

Query: 248 NHSVKHTEYLQNARLQKLSAVTLPD 322
           NH +KHTEY+QN     + +VTLPD
Sbjct: 61  NHHLKHTEYIQNTFAVGIPSVTLPD 85


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