BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007539
         (889 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativu...   332   5e-89
ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]     324   2e-86
ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]        286   3e-75
ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]...   278   1e-72
ref|XP_002517109.1| conserved hypothetical protein [Ricinus comm...   272   7e-71

>ref|XP_004134132.1| PREDICTED: parafibromin-like [Cucumis sativus]
           gi|449513423|ref|XP_004164322.1| PREDICTED:
           parafibromin-like [Cucumis sativus]
          Length = 407

 Score =  332 bits (852), Expect = 5e-89
 Identities = 176/281 (62%), Positives = 196/281 (69%), Gaps = 11/281 (3%)
 Frame = +3

Query: 78  MDPLSALRDFTIRGELDKIVKVNDEFRFANDYIFPCSAETTYRSKQGNLYTLETLVYYVK 257
           MDPLSALRDFTIRGELDKIV+VNDEFRFA+DY FPCS ET YRSKQGNLYTLETLVYY+K
Sbjct: 1   MDPLSALRDFTIRGELDKIVRVNDEFRFASDYSFPCSVETAYRSKQGNLYTLETLVYYIK 60

Query: 258 NHSVKHTEYLQNARLQKLPAVTLPDRKPLLEYLQGKVLSNDAIEF----XXXXXXXXXXE 425
           NH VKHTEYLQNAR Q + +VT PDRKPLL+YL GKV S+DAIEF              +
Sbjct: 61  NHHVKHTEYLQNARTQGITSVTFPDRKPLLDYLTGKVSSSDAIEFLVPQNPKFPDLPSVD 120

Query: 426 EYMPHNPXXXXXXXXXXXXXXXXXXXXXADYVLKIKGMEIPLRDREALLECRDCDFHTAX 605
           EY P +P                      DY+  I+ +E PL+DRE+LLEC++ +F+   
Sbjct: 121 EYRPEDPVIVGAAMDAVDEDDGFKDSTNVDYMTMIRAIERPLKDRESLLECKNRNFYNVL 180

Query: 606 XXXXXXXXXXXXXXXXXXXDGLVAKSRLMGSD-------GDDLGYDMAPKPKMNLKGSKI 764
                              DGLVAKSRLMGSD       GDDLGYD  PKPKM+LKG KI
Sbjct: 181 VMSTKREEERQRLESQQRKDGLVAKSRLMGSDDRGLVGYGDDLGYDANPKPKMHLKGGKI 240

Query: 765 GEGIPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 887
           GEG+PIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM
Sbjct: 241 GEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 281


>ref|XP_002282888.1| PREDICTED: parafibromin-like [Vitis vinifera]
          Length = 413

 Score =  324 bits (830), Expect = 2e-86
 Identities = 175/289 (60%), Positives = 194/289 (67%), Gaps = 19/289 (6%)
 Frame = +3

Query: 78  MDPLSALRDFTIRGELDKIVKVNDEFRFANDYIFPCSAETTYRSKQGNLYTLETLVYYVK 257
           MDPLSALRDFT+RGELDKIV+V DEFRF +DY FPCSAET YRSKQGNLYTLETLVYYVK
Sbjct: 1   MDPLSALRDFTVRGELDKIVRVGDEFRFGSDYTFPCSAETAYRSKQGNLYTLETLVYYVK 60

Query: 258 NHSVKHTEYLQNARLQKLPAVTLPDRKPLLEYLQGKVLSNDAIEF------XXXXXXXXX 419
           NH +KHTEYLQ+AR Q++PAVTLPDRKPLLEYLQGKV S DAIEF               
Sbjct: 61  NHHIKHTEYLQSARTQRIPAVTLPDRKPLLEYLQGKVASTDAIEFVVPQNPKIPDIGVDA 120

Query: 420 XEEYMPHNP----XXXXXXXXXXXXXXXXXXXXXADYVLKIKGMEIPLRDREALLECRDC 587
            +EY P +P                          DY+  I+  E PL+DRE+LLEC+  
Sbjct: 121 VDEYRPEDPTLLAIRDPPGSEDALDNSRVRGFDNVDYISMIRASERPLKDRESLLECKQR 180

Query: 588 DFHTAXXXXXXXXXXXXXXXXXXXXDGLVAKSRLMGS---------DGDDLGYDMAPKPK 740
           DF++                     DGLVAKSRLMG+         DGD+LGYD  PKPK
Sbjct: 181 DFYSVLMASTRREEERHRLESHQRKDGLVAKSRLMGADERGLGFWKDGDELGYDGTPKPK 240

Query: 741 MNLKGSKIGEGIPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 887
           M L  SKIGEG+PIILVPSAFQTLITIYNVKEFLEDGVFIPTDVK KQM
Sbjct: 241 MLLNRSKIGEGVPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKAKQM 289


>ref|XP_003537641.1| PREDICTED: parafibromin-like [Glycine max]
          Length = 389

 Score =  286 bits (733), Expect = 3e-75
 Identities = 153/278 (55%), Positives = 187/278 (67%), Gaps = 8/278 (2%)
 Frame = +3

Query: 78  MDPLSALRDFTIRGELDKIVKVNDEFRFANDYIFPCSAETTYRSKQGNLYTLETLVYYVK 257
           MDPLSALR+FT+RGE++KIV+VN EFRF  +Y FPC  ET YRS +GN YTLETLV+Y++
Sbjct: 1   MDPLSALREFTMRGEVEKIVRVNAEFRFGEEYTFPCWVETAYRSTKGNRYTLETLVHYIQ 60

Query: 258 NHSVKHTEYLQNARLQKLPAVTLPDRKPLLEYLQGKVLSNDAIEFXXXXXXXXXXEEYMP 437
           NH +KHTEY+QN     +P+VTLPDRKPLL+YLQG + S+D+I             EY P
Sbjct: 61  NHHLKHTEYIQNTFAVGIPSVTLPDRKPLLQYLQGTLSSSDSI-------------EYRP 107

Query: 438 H-NPXXXXXXXXXXXXXXXXXXXXXADYVLKIKGMEIPLRDREALLECRDCDFHTAXXXX 614
           H +P                      D++  I+  E PL+DR++LLEC++ DF++     
Sbjct: 108 HDDPSSFPAPKSTPNPPSLPPEDLNLDFISMIRSAEKPLKDRQSLLECKNRDFYSVLVSA 167

Query: 615 XXXXXXXXXXXXXXXXDGLVAKSRLMGSD------GDDL-GYDMAPKPKMNLKGSKIGEG 773
                           DGLVAKSRLMGSD       DD+ GYD  PKPKM+LKG+KIGEG
Sbjct: 168 TKREEERQRMESHQRKDGLVAKSRLMGSDDRGLGFSDDMGGYDPTPKPKMHLKGTKIGEG 227

Query: 774 IPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 887
           +PIILVPSAFQTLITIYNVKEFLEDGV+IPTDVKVKQM
Sbjct: 228 VPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQM 265


>ref|XP_002315762.1| PAF1 complex component [Populus trichocarpa]
           gi|222864802|gb|EEF01933.1| PAF1 complex component
           [Populus trichocarpa]
          Length = 405

 Score =  278 bits (711), Expect = 1e-72
 Identities = 151/279 (54%), Positives = 178/279 (63%), Gaps = 9/279 (3%)
 Frame = +3

Query: 78  MDPLSALRDFTIRGELDKIVKVNDEFRFANDYIFPCSAETTYRSKQGNLYTLETLVYYVK 257
           MDPLSALRDFTIRG+LDKI+++NDEFRF N+Y FPCS +T YRSKQGNLYTLETLVY ++
Sbjct: 1   MDPLSALRDFTIRGDLDKIIRINDEFRFGNEYTFPCSTKTAYRSKQGNLYTLETLVYCIQ 60

Query: 258 NHSVKHTEYLQNARLQKLPAVTLPDRKPLLEYLQGKVLSNDAIEFXXXXXXXXXXEEYMP 437
           N  +K T YLQ+A    +P VT  D KP+ EYL GK+ S D+I F            Y P
Sbjct: 61  NTKIKFTNYLQDALALGIPPVTYIDWKPVKEYLSGKLSSTDSIVFPLPQESQNPNLNYRP 120

Query: 438 HNPXXXXXXXXXXXXXXXXXXXXXA--DYVLKIKGMEIPLRDREALLECRDCDFHTAXXX 611
            +P                        ++V  I   E PL+DRE+LLEC++ DF+     
Sbjct: 121 DDPMLLDSRIDDSAAADKVNNGNEGVENHVSLIYANERPLKDRESLLECKNRDFYGVLVA 180

Query: 612 XXXXXXXXXXXXXXXXXDGLVAKSRLMGSD-------GDDLGYDMAPKPKMNLKGSKIGE 770
                            DGLVAKSRLMG+D       GD+LGYD A KPKM+ KG KIGE
Sbjct: 181 STRREEERHKFESQQRKDGLVAKSRLMGTDERGIGYGGDELGYDSAAKPKMHSKGGKIGE 240

Query: 771 GIPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 887
           G+PIILVPSAFQTLITIYNVKEFLEDG+FIPTDVK KQM
Sbjct: 241 GVPIILVPSAFQTLITIYNVKEFLEDGIFIPTDVKAKQM 279


>ref|XP_002517109.1| conserved hypothetical protein [Ricinus communis]
           gi|223543744|gb|EEF45272.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 409

 Score =  272 bits (696), Expect = 7e-71
 Identities = 151/283 (53%), Positives = 181/283 (63%), Gaps = 13/283 (4%)
 Frame = +3

Query: 78  MDPLSALRDFTIRGELDKIVKVNDEFRFANDYIFPCSAETTYRSKQGNLYTLETLVYYVK 257
           MDPLSALRDFT+R ++DKIV++NDEFRF+N+Y FPC+ +T YRSKQGNLYTLETLVYY++
Sbjct: 1   MDPLSALRDFTMRNDVDKIVRINDEFRFSNEYTFPCNIKTAYRSKQGNLYTLETLVYYIQ 60

Query: 258 NHSVKHTEYLQNARLQKLPAVTLPDRKPLLEYLQGKVLSNDAIEFXXXXXXXXXXEEYMP 437
           N  +K T+YLQ+AR   LPA+T  DRKPL +YL GKV S D+I F          +    
Sbjct: 61  NSHLKFTDYLQHARAAGLPAITFIDRKPLYDYLTGKVSSTDSIVFPLPQNPNPNLDLDND 120

Query: 438 HNPXXXXXXXXXXXXXXXXXXXXXADYVLK-------IKGMEIPLRDREALLECRDCDFH 596
            N                          +K       I  ME P++DREALLEC+  DF+
Sbjct: 121 LNSNAVLDSTINNNSADADVASGGGGNNVKEDNLISIIYSMERPIKDREALLECKTKDFY 180

Query: 597 TAXXXXXXXXXXXXXXXXXXXXDGLVAKSRLMGSD-----GDDLGYDMAPKPKM-NLKGS 758
           +                     DGLVAKSRLMGS+     GD++GYD   KPKM +LKG 
Sbjct: 181 SVLVASTRREEERQRIESQQRKDGLVAKSRLMGSEDRGYGGDEMGYDANSKPKMLHLKGG 240

Query: 759 KIGEGIPIILVPSAFQTLITIYNVKEFLEDGVFIPTDVKVKQM 887
           K GEG+PIILVPSAFQTLITIYNVKEFLEDGV+IPTDVKVKQM
Sbjct: 241 KFGEGVPIILVPSAFQTLITIYNVKEFLEDGVYIPTDVKVKQM 283