BLASTX nr result

ID: Coptis23_contig00007531 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007531
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631985.1| PREDICTED: uncharacterized protein LOC100854...   184   4e-44
emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]   184   4e-44
ref|XP_002519292.1| yth domain-containing protein, putative [Ric...   168   2e-39
ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818...   163   6e-38
ref|XP_003609844.1| YTH domain family protein [Medicago truncatu...   162   1e-37

>ref|XP_003631985.1| PREDICTED: uncharacterized protein LOC100854837 [Vitis vinifera]
          Length = 714

 Score =  184 bits (466), Expect = 4e-44
 Identities = 106/209 (50%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
 Frame = +3

Query: 3    RDTQEIKYRQGIEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYTP 182
            RDTQEI+++QG+EMLKIFKN+T KTS+LDDFMYYE RQ++MQ+EK RL  KSY+S F+ P
Sbjct: 499  RDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKTRLLIKSYESPFFVP 558

Query: 183  AFVPQKKANGVTDRPPSADETANRHNQLTSSGRKAAST-TEQVALKVDVINSSGSEEGNA 359
               P +K N V D PPS ++   + +  +     A ST T+QV+LK D IN S     N 
Sbjct: 559  PLDPPRKLNFVIDLPPSEEKMTKQTDVRSLEKPVATSTATDQVSLKSDDINRSSM---NE 615

Query: 360  KKNPVEDANDVTSILKIGSLSIDSKNVE-------AQPTATVTIASTNTVDVFTVGSMPV 518
            K +  E  +D  S LKIGSL+I+ K VE       A PT   T+  T +VDV TVGSMPV
Sbjct: 616  KCSTAETKDDTVSTLKIGSLTINPKQVESIPTMAAAPPTPAGTVVGTESVDVVTVGSMPV 675

Query: 519  KVNGFSEASSGTLTVGSIPIVTKGLTVDK 605
            KVNGF+E S G  T G+IP+  + L ++K
Sbjct: 676  KVNGFAE-SPGLFTFGTIPLDPRTLQLEK 703


>emb|CAN75753.1| hypothetical protein VITISV_038412 [Vitis vinifera]
          Length = 1960

 Score =  184 bits (466), Expect = 4e-44
 Identities = 106/209 (50%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
 Frame = +3

Query: 3    RDTQEIKYRQGIEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYTP 182
            RDTQEI+++QG+EMLKIFKN+T KTS+LDDFMYYE RQ++MQ+EK RL  KSY+S F+ P
Sbjct: 509  RDTQEIRFKQGLEMLKIFKNHTTKTSLLDDFMYYENRQRIMQDEKTRLLIKSYESPFFVP 568

Query: 183  AFVPQKKANGVTDRPPSADETANRHNQLTSSGRKAAST-TEQVALKVDVINSSGSEEGNA 359
               P +K N V D PPS ++   + +  +     A ST T+QV+LK D IN S     N 
Sbjct: 569  PLDPPRKLNFVIDLPPSEEKMTKQTDVRSLEKPVATSTATDQVSLKSDDINRSSM---NE 625

Query: 360  KKNPVEDANDVTSILKIGSLSIDSKNVE-------AQPTATVTIASTNTVDVFTVGSMPV 518
            K +  E  +D  S LKIGSL+I+ K VE       A PT   T+  T +VDV TVGSMPV
Sbjct: 626  KCSTAETKDDTVSTLKIGSLTINPKQVESIPTMAAAPPTPAGTVVGTESVDVVTVGSMPV 685

Query: 519  KVNGFSEASSGTLTVGSIPIVTKGLTVDK 605
            KVNGF+E S G  T G+IP+  + L ++K
Sbjct: 686  KVNGFAE-SPGLFTFGTIPLDPRTLQLEK 713


>ref|XP_002519292.1| yth domain-containing protein, putative [Ricinus communis]
            gi|223541607|gb|EEF43156.1| yth domain-containing
            protein, putative [Ricinus communis]
          Length = 706

 Score =  168 bits (425), Expect = 2e-39
 Identities = 98/202 (48%), Positives = 128/202 (63%), Gaps = 1/202 (0%)
 Frame = +3

Query: 3    RDTQEIKYRQGIEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYTP 182
            RDTQEI Y+QG+EMLKIFKN+  KTS+LDDFMYYE RQ++MQEEKAR   K  ++ F  P
Sbjct: 500  RDTQEILYKQGLEMLKIFKNHVSKTSLLDDFMYYENRQRIMQEEKARFAFKRLETPFLVP 559

Query: 183  AFVPQKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALKVDVINSSGSEEGNAK 362
               P  K N V + PPS  E     N   S     AS  EQ +   DV N+   E GN++
Sbjct: 560  VLDPAHKLNSVIELPPSKTENTIEQNGSNSMKNTEASAIEQGSSNSDVSNTI-VERGNSE 618

Query: 363  KNPVEDANDVTSILKIGSLSIDSKNVEAQP-TATVTIASTNTVDVFTVGSMPVKVNGFSE 539
               V   +D+ S LKIG LSI+ K  E +P +AT ++A+ ++ D+ TVGS+P++VNGF+E
Sbjct: 619  --IVNAGDDIESGLKIGLLSINPKQAEHKPSSATSSVATVDSADIVTVGSVPIQVNGFAE 676

Query: 540  ASSGTLTVGSIPIVTKGLTVDK 605
              SG L VGSIP+  K L  +K
Sbjct: 677  C-SGFLRVGSIPLDPKALQQEK 697


>ref|XP_003550796.1| PREDICTED: uncharacterized protein LOC100818167 [Glycine max]
          Length = 691

 Score =  163 bits (413), Expect = 6e-38
 Identities = 94/209 (44%), Positives = 134/209 (64%)
 Frame = +3

Query: 3    RDTQEIKYRQGIEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYTP 182
            RDTQEI Y +G+EMLKIFKN+  KTS+LDDFMYYE RQK+MQEEKA+L  +S+ +    P
Sbjct: 488  RDTQEIMYSKGLEMLKIFKNHNLKTSLLDDFMYYENRQKIMQEEKAKLLIRSFKNPLVLP 547

Query: 183  AFVPQKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALKVDVINSSGSEEGNAK 362
               P +K N V D PP  DE   + +    S ++ +S    V+     I S+ S +  A+
Sbjct: 548  TLEPPRKLNFVIDIPPVGDEKNAKMDDEVDSLKQISSAGHIVS--SSEITSTTSVDEKAE 605

Query: 363  KNPVEDANDVTSILKIGSLSIDSKNVEAQPTATVTIASTNTVDVFTVGSMPVKVNGFSEA 542
            K  V D  D+ S+LKIGS++I  K VE +P+  +++A+   +DV TVGSM ++VNGF+E 
Sbjct: 606  KGSV-DKEDIASVLKIGSVTITPKQVETKPSG-ISVANKEPLDVITVGSMQIRVNGFAE- 662

Query: 543  SSGTLTVGSIPIVTKGLTVDKQNTGKSSS 629
            SSG L +G+IP+  + L +D  +  K+ S
Sbjct: 663  SSGFLKIGTIPLDPRTLQLDGGSRVKNGS 691


>ref|XP_003609844.1| YTH domain family protein [Medicago truncatula]
            gi|355510899|gb|AES92041.1| YTH domain family protein
            [Medicago truncatula]
          Length = 651

 Score =  162 bits (410), Expect = 1e-37
 Identities = 94/204 (46%), Positives = 128/204 (62%)
 Frame = +3

Query: 3    RDTQEIKYRQGIEMLKIFKNYTFKTSILDDFMYYEQRQKVMQEEKARLHGKSYDSSFYTP 182
            RDTQEI YR+G+EMLKIFKNYT KTS+LDDF+YYE RQKVMQEEK +   K + S    P
Sbjct: 456  RDTQEIMYRKGLEMLKIFKNYTLKTSLLDDFIYYENRQKVMQEEKTKFLMKGFVS---IP 512

Query: 183  AFVPQKKANGVTDRPPSADETANRHNQLTSSGRKAASTTEQVALKVDVINSSGSEEGNAK 362
               P +K + V +  P++DE  ++ ++L S    + ST        DV +++  +E    
Sbjct: 513  VLAPPRKLDNVFEIHPASDEKNSKTDELGSVKHTSVSTAAHNVNSSDVTSTTSVDE--KV 570

Query: 363  KNPVEDANDVTSILKIGSLSIDSKNVEAQPTATVTIASTNTVDVFTVGSMPVKVNGFSEA 542
            +N   D  D++S+LKIGS++I  + VE +P      ++T  +DV TVGSM V+VNGFSE 
Sbjct: 571  ENDAVDKQDISSVLKIGSVTITPRQVETKP------SNTEPIDVVTVGSMQVRVNGFSE- 623

Query: 543  SSGTLTVGSIPIVTKGLTVDKQNT 614
            SSG L VGSIP+  + L   K  T
Sbjct: 624  SSGVLKVGSIPLDPRSLQAGKGTT 647


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