BLASTX nr result

ID: Coptis23_contig00007513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007513
         (620 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichoca...   210   1e-52
ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trich...   208   5e-52
ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trich...   207   9e-52
ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trich...   207   1e-51
emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera]   205   5e-51

>ref|XP_002318904.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859577|gb|EEE97124.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 799

 Score =  210 bits (535), Expect = 1e-52
 Identities = 108/207 (52%), Positives = 146/207 (70%), Gaps = 1/207 (0%)
 Frame = +2

Query: 2   VDVSVIFGRDHDKQEILSKLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEETIA 181
           VD S + GRD +K+ ++SKLL E+SQ+   V   ++S+VG GG GKTTLAQL +N+  + 
Sbjct: 76  VDESSVIGRDGEKKNVVSKLLAESSQKARDV--DVISLVGLGGIGKTTLAQLAFNDSEVT 133

Query: 182 TTFELKIWVCVSEPFDLERVAREIIEQATGEPPKVVGWELLHQHLCNSVKGKRFLLVLDD 361
             FE KIWVCVS+PFD  ++A+ I+EQ  G  P +V  + L Q +  S+KGKRFLLVLDD
Sbjct: 134 AHFEKKIWVCVSDPFDEVKIAKAILEQLEGSAPNLVELQSLLQRVSESIKGKRFLLVLDD 193

Query: 362 VWTEDSNCWEPLKLSLNGGERGSKIIVTTRNEEVAKMIGST-FRHRLEELSEDDCWHIFR 538
           VWTE+   WE LK SL G  RGS+I+VTTR + VA M+GST  R  ++ELS++ C  IF 
Sbjct: 194 VWTENHGQWEKLKPSLTGCARGSRILVTTRKDAVATMMGSTGHRINIKELSDEICRSIFN 253

Query: 539 QIAFLERSEEDCERLKGIGQELAKKCK 619
            +AF ERS+++ ERL  IG+++A KCK
Sbjct: 254 HVAFQERSKDERERLTDIGEKIASKCK 280


>ref|XP_002321815.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222868811|gb|EEF05942.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 987

 Score =  208 bits (530), Expect = 5e-52
 Identities = 102/206 (49%), Positives = 145/206 (70%)
 Frame = +2

Query: 2   VDVSVIFGRDHDKQEILSKLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEETIA 181
           VDVS + GR+ +K+ ++SKLLC++SQ+  +V++  +SIVG GG GKTTLAQL YN + I 
Sbjct: 193 VDVSRVHGREDEKKNVISKLLCDSSQEGRKVQV--ISIVGMGGLGKTTLAQLAYNADEIK 250

Query: 182 TTFELKIWVCVSEPFDLERVAREIIEQATGEPPKVVGWELLHQHLCNSVKGKRFLLVLDD 361
           T FE +IWVCVS PFD   VA+ IIE  +G  P +V  E L + +  S++GK+FLLVLDD
Sbjct: 251 TYFEKRIWVCVSHPFDENTVAKAIIEDLSGAAPNLVELEPLCKRISESIEGKKFLLVLDD 310

Query: 362 VWTEDSNCWEPLKLSLNGGERGSKIIVTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQ 541
           VW ++   WEPLK SL  G  GS+I+VTTR + VAKM+ S +   L +L++++CW +F Q
Sbjct: 311 VWEDNPRKWEPLKESLKCGAPGSRILVTTRKDTVAKMMESDYSLLLGKLTDEECWSVFSQ 370

Query: 542 IAFLERSEEDCERLKGIGQELAKKCK 619
           +AF  RS++ CE    IG+++  +CK
Sbjct: 371 VAFYGRSQDACEMFTEIGRQIVYRCK 396


>ref|XP_002332287.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222832449|gb|EEE70926.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 766

 Score =  207 bits (528), Expect = 9e-52
 Identities = 106/206 (51%), Positives = 143/206 (69%)
 Frame = +2

Query: 2   VDVSVIFGRDHDKQEILSKLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEETIA 181
           VD S++ GRD+D++ ++SKLL E+SQ+   V    +S+VG GG GKTTLAQL +N+  + 
Sbjct: 136 VDESIVSGRDNDREALVSKLLGESSQEAWDV--DAISLVGLGGIGKTTLAQLAFNDADVT 193

Query: 182 TTFELKIWVCVSEPFDLERVAREIIEQATGEPPKVVGWELLHQHLCNSVKGKRFLLVLDD 361
             FE KIWVCVS+PFD  R+A+ I+EQ  G  P +V  + L Q +  S+KGKRFLLVLDD
Sbjct: 194 AHFEKKIWVCVSDPFDEVRIAKAILEQLEGRAPDLVELQSLLQRVSESIKGKRFLLVLDD 253

Query: 362 VWTEDSNCWEPLKLSLNGGERGSKIIVTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQ 541
           VWTE+   WE LK SL GG  GS+I+VTTR   VA M+G+  R  +E+LS++ C  IF  
Sbjct: 254 VWTENHRQWEQLKPSLTGGAPGSRILVTTRKHSVATMMGTDHRINIEKLSDEICRSIFNH 313

Query: 542 IAFLERSEEDCERLKGIGQELAKKCK 619
           +AF ERS+++ ERL  I  ++A KCK
Sbjct: 314 VAFQERSKDERERLTDIDGKIASKCK 339


>ref|XP_002318907.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
           gi|222859580|gb|EEE97127.1| cc-nbs-lrr resistance
           protein [Populus trichocarpa]
          Length = 945

 Score =  207 bits (527), Expect = 1e-51
 Identities = 106/206 (51%), Positives = 141/206 (68%)
 Frame = +2

Query: 2   VDVSVIFGRDHDKQEILSKLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEETIA 181
           VD S + GRD +K+ ++SKLL E+S +   V   ++S+VG GG GKTTLAQL +N+  + 
Sbjct: 167 VDESSVIGRDGEKRNVVSKLLAESSHEARDV--DVISLVGLGGIGKTTLAQLAFNDSEVT 224

Query: 182 TTFELKIWVCVSEPFDLERVAREIIEQATGEPPKVVGWELLHQHLCNSVKGKRFLLVLDD 361
             FE KIWVCVSEPFD  R+A+ I+EQ  G P  +V  + L Q +  S+ GKR LLVLDD
Sbjct: 225 AHFEKKIWVCVSEPFDEIRIAKAILEQLEGRPTNLVELQSLLQGVSESITGKRLLLVLDD 284

Query: 362 VWTEDSNCWEPLKLSLNGGERGSKIIVTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQ 541
           VWTE+   WE LK SL G  RGS+I+VTTR + VA M+G+  R  +E+LS++ C  IF  
Sbjct: 285 VWTENHGQWEQLKPSLTGCARGSRILVTTRKDAVATMMGTDHRINIEKLSDEICRSIFNH 344

Query: 542 IAFLERSEEDCERLKGIGQELAKKCK 619
           +AF ERSE++ ERL  IG ++A KCK
Sbjct: 345 VAFQERSEDERERLTDIGDKIANKCK 370


>emb|CAN74893.1| hypothetical protein VITISV_002003 [Vitis vinifera]
          Length = 798

 Score =  205 bits (522), Expect = 5e-51
 Identities = 107/206 (51%), Positives = 133/206 (64%)
 Frame = +2

Query: 2   VDVSVIFGRDHDKQEILSKLLCETSQQETQVRIPILSIVGTGGFGKTTLAQLVYNEETIA 181
           +D   ++GRD DK  IL  LL ET Q ET     I+SIVGTGG GKTTLAQL YN   + 
Sbjct: 183 JDXXEVYGRDMDKNTILGHLLGETCQ-ETXSGPXIISIVGTGGMGKTTLAQLAYNXPEVK 241

Query: 182 TTFELKIWVCVSEPFDLERVAREIIEQATGEPPKVVGWELLHQHLCNSVKGKRFLLVLDD 361
             F+  IWVCVS+PFD  R+ REI+E   GE P +   E L Q +   + GK+FL+VLDD
Sbjct: 242 AHFDXXIWVCVSDPFDPXRIFREIVEILQGESPNLHSLEALQQKIQTCIAGKKFLIVLDD 301

Query: 362 VWTEDSNCWEPLKLSLNGGERGSKIIVTTRNEEVAKMIGSTFRHRLEELSEDDCWHIFRQ 541
           VWTE+   W  LK +LN G  GS+I+ TTR E V KM+G+T+ H LEELS +    +F Q
Sbjct: 302 VWTENHQLWGQLKSTLNCGGVGSRILATTRKESVVKMVGTTYTHSLEELSREQARALFHQ 361

Query: 542 IAFLERSEEDCERLKGIGQELAKKCK 619
           IAF E+S E  E LK IG+ +A KCK
Sbjct: 362 IAFFEKSREKVEELKEIGEXIADKCK 387


Top