BLASTX nr result

ID: Coptis23_contig00007512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007512
         (1027 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530166.1| conserved hypothetical protein [Ricinus comm...   199   1e-48
emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]   145   2e-32
ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266...   127   3e-27
ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|2...   126   1e-26
ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|2...   125   1e-26

>ref|XP_002530166.1| conserved hypothetical protein [Ricinus communis]
           gi|223530327|gb|EEF32221.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 195

 Score =  199 bits (505), Expect = 1e-48
 Identities = 111/204 (54%), Positives = 133/204 (65%), Gaps = 2/204 (0%)
 Frame = +1

Query: 100 MALDVQHKQLQEQQEYHVLGGVGDTNKSCTTPITSSSFTFDLNIAHPHQPVPITLNLF-H 276
           MAL VQ +Q    Q YH +G    T+ S  T +               QP+ +TLNLF +
Sbjct: 1   MALKVQTQQHHHHQ-YHFVGATVATHGSSLTTLC--------------QPISLTLNLFQY 45

Query: 277 SQIASSTVELDEPSPLPFGWQKCLNLKTGKIYYTKEKRLRINDATMSR-NGKNPRLDLKL 453
           + ++ S +EL+EP PLP GWQK LNL+TG+IYYTK  R +    TMSR NG  P+LDLKL
Sbjct: 46  ANLSCSYIELEEPFPLPLGWQKFLNLQTGEIYYTKNTRKK----TMSRRNGNGPKLDLKL 101

Query: 454 NLSPPRANPQIEXXXXXXXXXXXXXXXXXXXXELNNDETLGYSNSPEATSMVLVGCPRCL 633
           NLSPPRA+P++E                    ELN D+TL YSNSPEATSMVLVGCPRCL
Sbjct: 102 NLSPPRADPRVESPNRSATVSPTSPPSSCVSSELNQDDTLRYSNSPEATSMVLVGCPRCL 161

Query: 634 MYVMLSEEDPKCPKCKSTVLLDFV 705
           MYVMLSE+DPKCPKCKSTVLLDF+
Sbjct: 162 MYVMLSEDDPKCPKCKSTVLLDFL 185


>emb|CAN79170.1| hypothetical protein VITISV_012166 [Vitis vinifera]
          Length = 281

 Score =  145 bits (366), Expect = 2e-32
 Identities = 85/169 (50%), Positives = 99/169 (58%), Gaps = 17/169 (10%)
 Frame = +1

Query: 250 VPITLNLFHSQ---IASSTVELDEPSP--------------LPFGWQKCLNLKTGKIYYT 378
           V +T++LFHS     +S+ ++L +P P              LPFGW++   L  GK Y  
Sbjct: 99  VALTVHLFHSYHFLSSSAHIQLQDPFPSTPTPTLPSPPPPALPFGWERH-PLPQGKRY-- 155

Query: 379 KEKRLRINDATMSRNGKNPRLDLKLNLSPPRANPQIEXXXXXXXXXXXXXXXXXXXXELN 558
                 + DAT       P+LDLKLNLSPPRAN   E                    ELN
Sbjct: 156 ------LGDATRMSRRNGPKLDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELN 209

Query: 559 NDETLGYSNSPEATSMVLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDFV 705
            DETL YSNSPEATSMVLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDF+
Sbjct: 210 QDETLRYSNSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL 258


>ref|XP_002281204.1| PREDICTED: uncharacterized protein LOC100266492 [Vitis vinifera]
          Length = 120

 Score =  127 bits (320), Expect = 3e-27
 Identities = 66/96 (68%), Positives = 69/96 (71%)
 Frame = +1

Query: 418 RNGKNPRLDLKLNLSPPRANPQIEXXXXXXXXXXXXXXXXXXXXELNNDETLGYSNSPEA 597
           RNG  P+LDLKLNLSPPRAN   E                    ELN DETL YSNSPEA
Sbjct: 4   RNG--PKLDLKLNLSPPRANRHAESPSRSATLSPTSPPSSCVSSELNQDETLRYSNSPEA 61

Query: 598 TSMVLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDFV 705
           TSMVLVGCPRCLMYVMLSE+DPKCPKCKSTVLLDF+
Sbjct: 62  TSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFL 97


>ref|XP_002323401.1| predicted protein [Populus trichocarpa] gi|222868031|gb|EEF05162.1|
           predicted protein [Populus trichocarpa]
          Length = 115

 Score =  126 bits (316), Expect = 1e-26
 Identities = 61/96 (63%), Positives = 69/96 (71%)
 Frame = +1

Query: 418 RNGKNPRLDLKLNLSPPRANPQIEXXXXXXXXXXXXXXXXXXXXELNNDETLGYSNSPEA 597
           RNG  P+LDLKLNLSPPR NP++E                    E++ D+TL YS+SPEA
Sbjct: 4   RNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSEMSQDDTLRYSSSPEA 63

Query: 598 TSMVLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDFV 705
           TSMVLVGCPRCLMYVMLSE DPKCPKCKST LLDF+
Sbjct: 64  TSMVLVGCPRCLMYVMLSENDPKCPKCKSTWLLDFL 99


>ref|XP_002309400.1| predicted protein [Populus trichocarpa] gi|222855376|gb|EEE92923.1|
           predicted protein [Populus trichocarpa]
          Length = 104

 Score =  125 bits (315), Expect = 1e-26
 Identities = 61/96 (63%), Positives = 69/96 (71%)
 Frame = +1

Query: 418 RNGKNPRLDLKLNLSPPRANPQIEXXXXXXXXXXXXXXXXXXXXELNNDETLGYSNSPEA 597
           RNG  P+LDLKLNLSPPR NP++E                    E ++D+ L YS+SPEA
Sbjct: 4   RNGSLPKLDLKLNLSPPRVNPRVESPGRSATVSPTSPPSSCVSSERSHDDALRYSSSPEA 63

Query: 598 TSMVLVGCPRCLMYVMLSEEDPKCPKCKSTVLLDFV 705
           TSMVLVGCPRCLMYVMLSE DPKCPKCKSTVLLDF+
Sbjct: 64  TSMVLVGCPRCLMYVMLSENDPKCPKCKSTVLLDFL 99


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