BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007505
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi...   381   e-104
ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containi...   346   3e-93
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi...   341   8e-92
ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago ...   336   3e-90
ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containi...   308   6e-82

>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein At1g33350-like
            [Vitis vinifera]
          Length = 573

 Score =  381 bits (979), Expect = e-104
 Identities = 175/244 (71%), Positives = 209/244 (85%)
 Frame = -3

Query: 737  YIYRHDLVLNSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDS 558
            Y+YR+ L L+S++ NALVDMYGKCG LKEARRVFD+T +R LT WNSMINCLALHGQS +
Sbjct: 320  YVYRNGLGLDSFVSNALVDMYGKCGCLKEARRVFDRTLERSLTSWNSMINCLALHGQSQN 379

Query: 557  AIGVFEEMMECGSTVKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGC 378
            AI VFEEMM CGS VKPD VTF+GLLNACTHGGLV++G+ YF LM ++Y IEP+I+HYGC
Sbjct: 380  AISVFEEMMTCGSGVKPDEVTFIGLLNACTHGGLVEKGWLYFELMTQNYGIEPQIEHYGC 439

Query: 377  VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTEMNPSN 198
            ++DLLGRAGQFE+A+E++RGM+I+PD+ IWGSLLNG KIHG  DLAE+S+KKL +M+P+N
Sbjct: 440  LVDLLGRAGQFEEAMEVVRGMRIEPDEVIWGSLLNGCKIHGHTDLAEFSIKKLIDMDPNN 499

Query: 197  AGYGIMLANIYGEVGNWDEVGKVRKNLKERAIQKTPGCSWIEIDKEVRQFYSSDTMHRET 18
             GYGIMLANIYGE+G WDEV KVRK LKE+   KTPGCSWIEID +V QFYS D  H  T
Sbjct: 500  GGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTHPRT 559

Query: 17   DEIY 6
            +EIY
Sbjct: 560  EEIY 563


>ref|XP_003549152.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g33350-like [Glycine max]
          Length = 522

 Score =  346 bits (887), Expect = 3e-93
 Identities = 150/244 (61%), Positives = 202/244 (82%)
 Frame = -3

Query: 737 YIYRHDLVLNSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDS 558
           Y+Y++ L  +S++LNALVDMYGKCGSL +AR+VF+   ++GLT WNSMINC ALHGQSDS
Sbjct: 262 YVYKNGLAFDSFVLNALVDMYGKCGSLGKARKVFEMNPEKGLTSWNSMINCFALHGQSDS 321

Query: 557 AIGVFEEMMECGSTVKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGC 378
           AI +FE+M+E G  V+PD VTFVGLLNACTHGGLV++GY YF +M++ Y IEP+I+HYGC
Sbjct: 322 AIAIFEQMVEGGGGVRPDEVTFVGLLNACTHGGLVEKGYWYFEMMVQEYGIEPQIEHYGC 381

Query: 377 VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTEMNPSN 198
           +IDLLGRAG+F++A+++++GM ++PD+ +WGSLLNG K+HGR DLAE++ KKL E++P N
Sbjct: 382 LIDLLGRAGRFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLIEIDPHN 441

Query: 197 AGYGIMLANIYGEVGNWDEVGKVRKNLKERAIQKTPGCSWIEIDKEVRQFYSSDTMHRET 18
            GY IMLAN+YGE+G WDEV  V + LK++   K PGCSWIE+D +V QFYS D  + +T
Sbjct: 442 GGYRIMLANVYGELGKWDEVRNVWRTLKQQKSYKVPGCSWIEVDDQVHQFYSLDKSNPKT 501

Query: 17  DEIY 6
           +++Y
Sbjct: 502 EDLY 505



 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 9/191 (4%)
 Frame = -3

Query: 692 ALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDSAIGVFEEMM-ECGST 516
           A+V  + + G ++ A RVF +  DR +  WN++I     +G     I +F  M+ EC   
Sbjct: 176 AMVSGFARVGDVESAVRVFGEMLDRDVPSWNALIAGCTQNGAFTQGIELFRRMVFECN-- 233

Query: 515 VKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGCVIDLLGRAGQFEKA 336
            +P+GVT V  L+AC H G++  G  + +  +    +  +      ++D+ G+ G   KA
Sbjct: 234 -RPNGVTVVCALSACGHMGMLQLG-RWIHGYVYKNGLAFDSFVLNALVDMYGKCGSLGKA 291

Query: 335 LEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTE----MNPSNAGY-GIMLAN 171
            ++   M  +     W S++N   +HG+ D A    +++ E    + P    + G++ A 
Sbjct: 292 RKVFE-MNPEKGLTSWNSMINCFALHGQSDSAIAIFEQMVEGGGGVRPDEVTFVGLLNAC 350

Query: 170 IYG---EVGNW 147
            +G   E G W
Sbjct: 351 THGGLVEKGYW 361


>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein At1g33350-like
            [Cucumis sativus] gi|449510706|ref|XP_004163739.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g33350-like [Cucumis sativus]
          Length = 563

 Score =  341 bits (875), Expect = 8e-92
 Identities = 158/245 (64%), Positives = 195/245 (79%)
 Frame = -3

Query: 737  YIYRHDLVLNSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDS 558
            Y+++     +S+I NAL+DMYGKCG+LK ARRVFD    + LT WNS+INCLALHG S S
Sbjct: 310  YVFKTYPGQDSFISNALLDMYGKCGNLKVARRVFDMITLKNLTSWNSLINCLALHGHSGS 369

Query: 557  AIGVFEEMMECGSTVKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGC 378
            AI +F E++ CG  VKP+ VTFVG+LNACTHGGLV++GY YF +M R Y+IEP+I+H+GC
Sbjct: 370  AIDLFAELIHCGDGVKPNEVTFVGVLNACTHGGLVEKGYSYFEMMRRDYDIEPQIEHFGC 429

Query: 377  VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTEMNPSN 198
            +IDLLGRAG+FE+A+E++RGM I+PD+ +WGSLLN  KIHGR DLAEYSVKKL EM+P N
Sbjct: 430  LIDLLGRAGRFEEAMEVVRGMNIEPDEVVWGSLLNACKIHGRSDLAEYSVKKLIEMDPKN 489

Query: 197  AGYGIMLANIYGEVGNWDEVGKVRKNLKERAIQKTPGCSWIEIDKEVRQFYSSDTMHRET 18
             GY IMLANIY E G WDEV KVR+ LKE+   KTPGCSWIE+D +V QFYS D  H   
Sbjct: 490  GGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSHPSV 549

Query: 17   DEIYE 3
            +EIY+
Sbjct: 550  EEIYK 554


>ref|XP_003619586.1| hypothetical protein MTR_6g059820 [Medicago truncatula]
           gi|355494601|gb|AES75804.1| hypothetical protein
           MTR_6g059820 [Medicago truncatula]
          Length = 528

 Score =  336 bits (862), Expect = 3e-90
 Identities = 147/244 (60%), Positives = 196/244 (80%)
 Frame = -3

Query: 737 YIYRHDLVLNSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDS 558
           Y+YRH  V++S++ NALVDMYGKCGSL+ AR+VF+    +GLT WNSMINC ALHG+ + 
Sbjct: 268 YVYRHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTSWNSMINCYALHGKCED 327

Query: 557 AIGVFEEMMECGSTVKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGC 378
           AI  FE+M+ECG  V+PD VTF+GLLNACTHGGLV++G  YF +MI+ Y IEP+I HYGC
Sbjct: 328 AITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAHYGC 387

Query: 377 VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTEMNPSN 198
           +IDLLGRAGQF++A+++++GM ++PD+ +WGSLLNG K+HGR DLAE++ KKL E++P N
Sbjct: 388 LIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEIDPHN 447

Query: 197 AGYGIMLANIYGEVGNWDEVGKVRKNLKERAIQKTPGCSWIEIDKEVRQFYSSDTMHRET 18
            GYG MLANIYG++G WDE+  V   LK++   K PGCSWIE+D +V QF+S D  + +T
Sbjct: 448 GGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSNPKT 507

Query: 17  DEIY 6
           +E+Y
Sbjct: 508 EELY 511



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 46/175 (26%), Positives = 84/175 (48%), Gaps = 9/175 (5%)
 Frame = -3

Query: 710 NSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDSAIGVFEEMM 531
           N  +   LV  Y + G +++   VFD+  DR +  WN++I+    +G     I +F EM+
Sbjct: 166 NIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQNGFFSEGIRLFREMV 225

Query: 530 ECGST--------VKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRH-YNIEPEIQHYGC 378
                         KP+ VT V +L+AC HGG++  G      + RH + ++  + +   
Sbjct: 226 FAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVYRHGFVVDSFVSN--A 283

Query: 377 VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTE 213
           ++D+ G+ G  E A ++   M  +     W S++N   +HG+ + A    +K+ E
Sbjct: 284 LVDMYGKCGSLELARKVFE-MDQRKGLTSWNSMINCYALHGKCEDAITFFEKMVE 337


>ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein At1g33350-like
            [Brachypodium distachyon]
          Length = 523

 Score =  308 bits (790), Expect = 6e-82
 Identities = 142/246 (57%), Positives = 189/246 (76%), Gaps = 1/246 (0%)
 Frame = -3

Query: 737  YIYRHDLVLNSYILNALVDMYGKCGSLKEARRVFDQTWDRGLTLWNSMINCLALHGQSDS 558
            Y +R  +   S ++N L+DMYGKCG+LKEAR +FD+  DR LT WNS+INCLALHG S S
Sbjct: 269  YAWRSCVGFGSSVVNGLIDMYGKCGNLKEARWMFDEFSDRSLTTWNSLINCLALHGHSKS 328

Query: 557  AIGVFEEMMECGSTVKPDGVTFVGLLNACTHGGLVDRGYEYFNLMIRHYNIEPEIQHYGC 378
            AI VF+EM + G  ++PD VTFVGLLNACTHGG VD G  YF LM     IEPEI+HYGC
Sbjct: 329  AIAVFDEMRDEG--IEPDVVTFVGLLNACTHGGFVDEGLTYFKLMCDELRIEPEIEHYGC 386

Query: 377  VIDLLGRAGQFEKALEIIRGMKIKPDDCIWGSLLNGSKIHGRMDLAEYSVKKLTEMNPSN 198
            ++DLLGRAG+FE A+ +I  MK++PD+ IWGSLLN  + H +++LAE+SV+KL ++NP+N
Sbjct: 387  IVDLLGRAGRFEDAMNVINDMKVQPDEVIWGSLLNACRTHRQLELAEFSVRKLLQLNPNN 446

Query: 197  AGYGIMLANIYGEVGNWDEVGKVRKNLKERAI-QKTPGCSWIEIDKEVRQFYSSDTMHRE 21
            A Y +MLAN+Y E G+W+EV K+RK +KE  + +K PGCSWIE+D++  +FYS D  H E
Sbjct: 447  ANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDRKTHRFYSGDDAHPE 506

Query: 20   TDEIYE 3
            +++IY+
Sbjct: 507  SEDIYD 512