BLASTX nr result

ID: Coptis23_contig00007503 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007503
         (1711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146678.1| PREDICTED: APO protein 2, chloroplastic-like...   568   e-159
ref|XP_002275774.2| PREDICTED: APO protein 2, chloroplastic-like...   551   e-154
emb|CBI36535.3| unnamed protein product [Vitis vinifera]              551   e-154
ref|XP_002308405.1| predicted protein [Populus trichocarpa] gi|2...   531   e-148
ref|XP_002325131.1| predicted protein [Populus trichocarpa] gi|2...   526   e-147

>ref|XP_004146678.1| PREDICTED: APO protein 2, chloroplastic-like [Cucumis sativus]
            gi|449503167|ref|XP_004161867.1| PREDICTED: APO protein
            2, chloroplastic-like [Cucumis sativus]
          Length = 451

 Score =  568 bits (1463), Expect = e-159
 Identities = 276/423 (65%), Positives = 322/423 (76%), Gaps = 1/423 (0%)
 Frame = -2

Query: 1608 SLRVNHYPKWESLRLNPFLGLGFCHSSKYRLN-ELKVPLMFRVRPRVTPCFSAFVVKCNH 1432
            S R++   K E L+ N   GL    S ++  N + K     ++     PC  + V+KC+H
Sbjct: 29   SRRISFQNKSEFLKPNTCPGLSLLDSLQHLSNFDFKALTKSKISSWKIPCSYSCVIKCDH 88

Query: 1431 PQNENLPRYYSKKEKKPFPTPIVELRRAARERVKRMKGQPRKXXXXXXXXXXXXXXXXLA 1252
            PQN + PRYYSKKEKKPFP PIVELRRAARER+K  KGQPR                 +A
Sbjct: 89   PQNADFPRYYSKKEKKPFPVPIVELRRAARERMKNSKGQPRMRVPPPKNGLLVKSMIPIA 148

Query: 1251 YEVFNARITLINNVKRLMTVVPVQACKWCNEIHVGPAGHPFKSCRGQQTERRKGLHEWTK 1072
            Y+VFNARITLINN+K+L+ V+PV AC +CNEIHVGP GHPFKSCRG+    RKGLHEWTK
Sbjct: 149  YKVFNARITLINNLKKLLKVIPVHACGFCNEIHVGPVGHPFKSCRGKNASLRKGLHEWTK 208

Query: 1071 ATIDDLILPVEAYHLYDRLGKRITHEERFSIPRIPAVNELCIQAGVNLPDLPTKRRRKPV 892
            AT++D+ LPVEAYHLYDRLG+RI+H+ER+SIPRIPAV ELCIQAGV+LPD P KRRRKPV
Sbjct: 209  ATLEDIFLPVEAYHLYDRLGRRISHQERYSIPRIPAVVELCIQAGVDLPDYPAKRRRKPV 268

Query: 891  IRISKSEIIDANEDDLPDPMPEVSPEPILTEIPDSEIVSPSDXXXXXXXXXXXXXXXEKM 712
            IRISKSE IDA+E +LPDP PEV  +P+LTEIPDS+ V+PSD               E+M
Sbjct: 269  IRISKSEYIDADESELPDPEPEVPLKPLLTEIPDSDAVAPSDVEDIAWLADQTIQAWEQM 328

Query: 711  RHGAGRLMKKYLVRVCGYCPEVHIGHTGHKAQNCGAFKHQQRNGQHGWQAAVIDDLIPPR 532
            R GA RL+K Y VRVCGYCPEVH+G +GHKAQNCGAFKHQQRNGQHGWQ AV+DDLIPPR
Sbjct: 329  RRGAKRLIKMYPVRVCGYCPEVHVGSSGHKAQNCGAFKHQQRNGQHGWQRAVLDDLIPPR 388

Query: 531  YVWHVPDVEGLPLQRELRSFYGQAPVVVEMCVQGGAVAPDQYKSTMRLDIGIPRDISEAE 352
            YVWHVPDV G PLQRELR+FYGQAP +VEMC+Q GA  PD+YKSTMR+D+GIP DI EAE
Sbjct: 389  YVWHVPDVNGPPLQRELRNFYGQAPAIVEMCIQAGAAIPDEYKSTMRMDVGIPLDIKEAE 448

Query: 351  MVV 343
            MVV
Sbjct: 449  MVV 451


>ref|XP_002275774.2| PREDICTED: APO protein 2, chloroplastic-like [Vitis vinifera]
          Length = 478

 Score =  551 bits (1419), Expect = e-154
 Identities = 270/421 (64%), Positives = 320/421 (76%)
 Frame = -2

Query: 1605 LRVNHYPKWESLRLNPFLGLGFCHSSKYRLNELKVPLMFRVRPRVTPCFSAFVVKCNHPQ 1426
            LRV++  + E L+   +  L    S KY    L++PL FR+  +      + V++ N+PQ
Sbjct: 60   LRVSYNRRLEFLKFKSYPNLSSDDSLKYGGIRLELPLQFRIPSKNCHKCHSLVIQSNYPQ 119

Query: 1425 NENLPRYYSKKEKKPFPTPIVELRRAARERVKRMKGQPRKXXXXXXXXXXXXXXXXLAYE 1246
            N +LPRYYSKKEKKPFP PIVELRRAARER+K MKGQPR+                +AY+
Sbjct: 120  NADLPRYYSKKEKKPFPIPIVELRRAARERLKNMKGQPRRPIPPPKSGLLVKRLIPVAYD 179

Query: 1245 VFNARITLINNVKRLMTVVPVQACKWCNEIHVGPAGHPFKSCRGQQTERRKGLHEWTKAT 1066
            V NAR TLINN+K+L+ V+PV ACKWCNEIHVG  GHPFKSCRG QT  RKG HEWT A 
Sbjct: 180  VMNARTTLINNLKKLLKVLPVHACKWCNEIHVGHVGHPFKSCRGPQTSIRKGDHEWTNAF 239

Query: 1065 IDDLILPVEAYHLYDRLGKRITHEERFSIPRIPAVNELCIQAGVNLPDLPTKRRRKPVIR 886
            I+D+++PV+A+HL+DRLG+RI HEERFSIPRIPAV ELCIQAGV+LP+ PTKRRRKP+IR
Sbjct: 240  IEDILVPVDAFHLFDRLGRRIPHEERFSIPRIPAVVELCIQAGVDLPEFPTKRRRKPIIR 299

Query: 885  ISKSEIIDANEDDLPDPMPEVSPEPILTEIPDSEIVSPSDXXXXXXXXXXXXXXXEKMRH 706
            I KSE IDA+E +LPDP+PEV   P+LTEIPDSEI +PS                +KM+ 
Sbjct: 300  IGKSEFIDADESELPDPVPEVPKTPLLTEIPDSEIEAPSSAEETALLAEETLKAWDKMKG 359

Query: 705  GAGRLMKKYLVRVCGYCPEVHIGHTGHKAQNCGAFKHQQRNGQHGWQAAVIDDLIPPRYV 526
            GA +LM+ Y VRVCGYCPEVHIG +GHKAQNCGA KHQQRNGQHGWQAAV++DLIPPRYV
Sbjct: 360  GAKKLMRMYPVRVCGYCPEVHIGPSGHKAQNCGAHKHQQRNGQHGWQAAVLNDLIPPRYV 419

Query: 525  WHVPDVEGLPLQRELRSFYGQAPVVVEMCVQGGAVAPDQYKSTMRLDIGIPRDISEAEMV 346
            WHVP+  G PLQREL++FYGQAPVVVEMCVQ GA  P+QYK TMRLD+GIP DI EAEMV
Sbjct: 420  WHVPN--GQPLQRELKNFYGQAPVVVEMCVQAGAAVPEQYKPTMRLDVGIPTDIREAEMV 477

Query: 345  V 343
            V
Sbjct: 478  V 478


>emb|CBI36535.3| unnamed protein product [Vitis vinifera]
          Length = 551

 Score =  551 bits (1419), Expect = e-154
 Identities = 270/421 (64%), Positives = 320/421 (76%)
 Frame = -2

Query: 1605 LRVNHYPKWESLRLNPFLGLGFCHSSKYRLNELKVPLMFRVRPRVTPCFSAFVVKCNHPQ 1426
            LRV++  + E L+   +  L    S KY    L++PL FR+  +      + V++ N+PQ
Sbjct: 60   LRVSYNRRLEFLKFKSYPNLSSDDSLKYGGIRLELPLQFRIPSKNCHKCHSLVIQSNYPQ 119

Query: 1425 NENLPRYYSKKEKKPFPTPIVELRRAARERVKRMKGQPRKXXXXXXXXXXXXXXXXLAYE 1246
            N +LPRYYSKKEKKPFP PIVELRRAARER+K MKGQPR+                +AY+
Sbjct: 120  NADLPRYYSKKEKKPFPIPIVELRRAARERLKNMKGQPRRPIPPPKSGLLVKRLIPVAYD 179

Query: 1245 VFNARITLINNVKRLMTVVPVQACKWCNEIHVGPAGHPFKSCRGQQTERRKGLHEWTKAT 1066
            V NAR TLINN+K+L+ V+PV ACKWCNEIHVG  GHPFKSCRG QT  RKG HEWT A 
Sbjct: 180  VMNARTTLINNLKKLLKVLPVHACKWCNEIHVGHVGHPFKSCRGPQTSIRKGDHEWTNAF 239

Query: 1065 IDDLILPVEAYHLYDRLGKRITHEERFSIPRIPAVNELCIQAGVNLPDLPTKRRRKPVIR 886
            I+D+++PV+A+HL+DRLG+RI HEERFSIPRIPAV ELCIQAGV+LP+ PTKRRRKP+IR
Sbjct: 240  IEDILVPVDAFHLFDRLGRRIPHEERFSIPRIPAVVELCIQAGVDLPEFPTKRRRKPIIR 299

Query: 885  ISKSEIIDANEDDLPDPMPEVSPEPILTEIPDSEIVSPSDXXXXXXXXXXXXXXXEKMRH 706
            I KSE IDA+E +LPDP+PEV   P+LTEIPDSEI +PS                +KM+ 
Sbjct: 300  IGKSEFIDADESELPDPVPEVPKTPLLTEIPDSEIEAPSSAEETALLAEETLKAWDKMKG 359

Query: 705  GAGRLMKKYLVRVCGYCPEVHIGHTGHKAQNCGAFKHQQRNGQHGWQAAVIDDLIPPRYV 526
            GA +LM+ Y VRVCGYCPEVHIG +GHKAQNCGA KHQQRNGQHGWQAAV++DLIPPRYV
Sbjct: 360  GAKKLMRMYPVRVCGYCPEVHIGPSGHKAQNCGAHKHQQRNGQHGWQAAVLNDLIPPRYV 419

Query: 525  WHVPDVEGLPLQRELRSFYGQAPVVVEMCVQGGAVAPDQYKSTMRLDIGIPRDISEAEMV 346
            WHVP+  G PLQREL++FYGQAPVVVEMCVQ GA  P+QYK TMRLD+GIP DI EAEMV
Sbjct: 420  WHVPN--GQPLQRELKNFYGQAPVVVEMCVQAGAAVPEQYKPTMRLDVGIPTDIREAEMV 477

Query: 345  V 343
            V
Sbjct: 478  V 478


>ref|XP_002308405.1| predicted protein [Populus trichocarpa] gi|222854381|gb|EEE91928.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  531 bits (1369), Expect = e-148
 Identities = 259/419 (61%), Positives = 311/419 (74%)
 Frame = -2

Query: 1599 VNHYPKWESLRLNPFLGLGFCHSSKYRLNELKVPLMFRVRPRVTPCFSAFVVKCNHPQNE 1420
            V+  P  E L+L+ F      HS ++   +L+     R  PR+       V+   +PQN 
Sbjct: 6    VSFLPSSEFLKLSSF------HSFQHSDLKLRHSFKSRTTPRMLRQPHELVITNEYPQNA 59

Query: 1419 NLPRYYSKKEKKPFPTPIVELRRAARERVKRMKGQPRKXXXXXXXXXXXXXXXXLAYEVF 1240
            + PR YS+KEKKPFP PIVELRRAARER K+ KGQP+                 LAY+VF
Sbjct: 60   DFPRNYSRKEKKPFPIPIVELRRAARERFKKNKGQPKGRAPPPKNGLLVQCLVPLAYDVF 119

Query: 1239 NARITLINNVKRLMTVVPVQACKWCNEIHVGPAGHPFKSCRGQQTERRKGLHEWTKATID 1060
            NARITLINN+K+L+ VVPV AC WCNE+HVGP GHPFKSC+G+    RKGLH+WT A ++
Sbjct: 120  NARITLINNLKKLLKVVPVHACGWCNELHVGPEGHPFKSCKGKHATLRKGLHQWTNAAVE 179

Query: 1059 DLILPVEAYHLYDRLGKRITHEERFSIPRIPAVNELCIQAGVNLPDLPTKRRRKPVIRIS 880
            D+++P+EAYHLYD LGKRI HEERFSIPRIPAV ELCIQAGV + + PTKRRRKP+IRI 
Sbjct: 180  DVLVPIEAYHLYDPLGKRIKHEERFSIPRIPAVMELCIQAGVYVSEYPTKRRRKPIIRIG 239

Query: 879  KSEIIDANEDDLPDPMPEVSPEPILTEIPDSEIVSPSDXXXXXXXXXXXXXXXEKMRHGA 700
            K E +DA+E DLPDP+PEV  +P+LTE+P SE V+P++               EKMR GA
Sbjct: 240  KREFVDADESDLPDPVPEVPLKPLLTELPISEAVAPTNEEEKTLLAEETLQAWEKMRKGA 299

Query: 699  GRLMKKYLVRVCGYCPEVHIGHTGHKAQNCGAFKHQQRNGQHGWQAAVIDDLIPPRYVWH 520
             +LM+ Y VRVCGYCPEVH+GH+GHKAQNCGA KHQQRNGQHGWQ+AV+D+LIPPRYVWH
Sbjct: 300  KKLMQMYRVRVCGYCPEVHVGHSGHKAQNCGAHKHQQRNGQHGWQSAVLDNLIPPRYVWH 359

Query: 519  VPDVEGLPLQRELRSFYGQAPVVVEMCVQGGAVAPDQYKSTMRLDIGIPRDISEAEMVV 343
            VPDV+G PL+RELR+FYGQAP VVE+CVQ GA  PDQYKSTMRLDIGIP  + EAEMVV
Sbjct: 360  VPDVDGPPLRRELRNFYGQAPAVVEICVQAGAAVPDQYKSTMRLDIGIPSSVKEAEMVV 418


>ref|XP_002325131.1| predicted protein [Populus trichocarpa] gi|222866565|gb|EEF03696.1|
            predicted protein [Populus trichocarpa]
          Length = 455

 Score =  526 bits (1356), Expect = e-147
 Identities = 265/456 (58%), Positives = 325/456 (71%), Gaps = 4/456 (0%)
 Frame = -2

Query: 1698 SILPTGMSCGSSAQCPIGIIRVSMLDKSSTSLRVNHYPKWESLRLNPFLGLGFCHSSKYR 1519
            S + T   CGSS+  P+ ++ +      ++SL++  +      R + FL L + HS ++ 
Sbjct: 5    SSVATWKDCGSSSNYPLCVMALYHSKLRASSLKMEPFTVSYDQR-SEFLKLSYLHSFQHS 63

Query: 1518 LNELKVPLMFRVRPRVTPCF----SAFVVKCNHPQNENLPRYYSKKEKKPFPTPIVELRR 1351
                 V +   + PR+T        A V+   HPQN + PR YS+KEKKPFP PIVELRR
Sbjct: 64   ----NVKVRHSLNPRITRTRLHEPHALVISNEHPQNADFPRNYSRKEKKPFPIPIVELRR 119

Query: 1350 AARERVKRMKGQPRKXXXXXXXXXXXXXXXXLAYEVFNARITLINNVKRLMTVVPVQACK 1171
            AARER+K+ KGQP+                 LAY+VFNARITLINN+++L+ VVPV AC 
Sbjct: 120  AARERLKKSKGQPKGRVPPPKKGLIVQSLLPLAYDVFNARITLINNLRKLLKVVPVHACG 179

Query: 1170 WCNEIHVGPAGHPFKSCRGQQTERRKGLHEWTKATIDDLILPVEAYHLYDRLGKRITHEE 991
            WC+EIHVG  GHPFKSC+G++   R GLH+WT A I+D+++PVEAYHLYDRLGKRITHEE
Sbjct: 180  WCDEIHVGLEGHPFKSCKGKRATLRNGLHQWTNAAIEDVLVPVEAYHLYDRLGKRITHEE 239

Query: 990  RFSIPRIPAVNELCIQAGVNLPDLPTKRRRKPVIRISKSEIIDANEDDLPDPMPEVSPEP 811
            RFSI +IPAV ELCIQAGV++P+ PTKRRRKP+IRI K E  DA+E DLP+P+ EV  +P
Sbjct: 240  RFSILQIPAVMELCIQAGVHIPEYPTKRRRKPIIRIGKREFADADESDLPEPLLEVPLKP 299

Query: 810  ILTEIPDSEIVSPSDXXXXXXXXXXXXXXXEKMRHGAGRLMKKYLVRVCGYCPEVHIGHT 631
            +LTEI  SE V+P++               EKMR GA RLM+ Y VR CGYCPEVH+G +
Sbjct: 300  LLTEISISEAVAPANEEEKTLLAEETLRAWEKMRKGAKRLMQMYRVRACGYCPEVHVGPS 359

Query: 630  GHKAQNCGAFKHQQRNGQHGWQAAVIDDLIPPRYVWHVPDVEGLPLQRELRSFYGQAPVV 451
            GHKAQNCGA KHQQRNGQHGWQ+AV+DDLIPPRYVWHVPDV GLPL+RELR+FYGQAP V
Sbjct: 360  GHKAQNCGAHKHQQRNGQHGWQSAVLDDLIPPRYVWHVPDVVGLPLRRELRNFYGQAPAV 419

Query: 450  VEMCVQGGAVAPDQYKSTMRLDIGIPRDISEAEMVV 343
            VE+C Q GA  PDQYKSTMRLDIGIP  + EAEM V
Sbjct: 420  VEICFQAGAAVPDQYKSTMRLDIGIPSSVKEAEMAV 455


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