BLASTX nr result

ID: Coptis23_contig00007500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007500
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317026.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_002300544.1| predicted protein [Populus trichocarpa] gi|2...   101   7e-20
gb|AET72045.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase 2...    99   3e-19
gb|AET72043.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase 2...    99   3e-19
emb|CBI40773.3| unnamed protein product [Vitis vinifera]               99   5e-19

>ref|XP_002317026.1| predicted protein [Populus trichocarpa] gi|222860091|gb|EEE97638.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/57 (82%), Positives = 52/57 (91%)
 Frame = +3

Query: 57  RGCKAIYVSGGASSVLLKDGITRAPIVRFGTAKRVVELKFFVENPANFDTLSVIFNR 227
           RGCKAIY SGGASSVLL+DG+TRAP+VRFGTAKR  ELKFF E+PANFDTL V+FNR
Sbjct: 274 RGCKAIYASGGASSVLLRDGMTRAPVVRFGTAKRAAELKFFTEDPANFDTLGVVFNR 330


>ref|XP_002300544.1| predicted protein [Populus trichocarpa] gi|222847802|gb|EEE85349.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/57 (84%), Positives = 52/57 (91%)
 Frame = +3

Query: 57  RGCKAIYVSGGASSVLLKDGITRAPIVRFGTAKRVVELKFFVENPANFDTLSVIFNR 227
           RGCKAIY SGGASS+LLKD +TRAP+VRFGTAKR  ELKFFVE+PANFDTLSV FNR
Sbjct: 265 RGCKAIYASGGASSMLLKDAMTRAPVVRFGTAKRAAELKFFVEDPANFDTLSVAFNR 321


>gb|AET72045.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase 2 [Dimocarpus
           longan]
          Length = 568

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 45/57 (78%), Positives = 54/57 (94%)
 Frame = +3

Query: 57  RGCKAIYVSGGASSVLLKDGITRAPIVRFGTAKRVVELKFFVENPANFDTLSVIFNR 227
           RGCKAI++SGGASSV+ +DG+TRAP+VRFGTAKR  ELKFF+ENPANF+TLSVIFN+
Sbjct: 256 RGCKAIHLSGGASSVVFRDGMTRAPVVRFGTAKRAAELKFFLENPANFETLSVIFNK 312


>gb|AET72043.1| 3-hydroxy-3-methylglutaryl coenzyme A reductase 2 [Litchi
           chinensis]
          Length = 568

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 44/57 (77%), Positives = 55/57 (96%)
 Frame = +3

Query: 57  RGCKAIYVSGGASSVLLKDGITRAPIVRFGTAKRVVELKFFVENPANFDTLSVIFNR 227
           RGCKAI++SGGASSV+L+DG+TRAP+V+FGTAKR  ELKFF+ENPANF+TLSV+FN+
Sbjct: 256 RGCKAIHLSGGASSVVLRDGMTRAPVVKFGTAKRAAELKFFLENPANFETLSVVFNK 312


>emb|CBI40773.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/57 (78%), Positives = 53/57 (92%)
 Frame = +3

Query: 57  RGCKAIYVSGGASSVLLKDGITRAPIVRFGTAKRVVELKFFVENPANFDTLSVIFNR 227
           RGCKAIYVSGGA+S++L+DG+TRAP+VRF TAKR  ELKFF+ENP NF+TLSVIFNR
Sbjct: 229 RGCKAIYVSGGATSMVLRDGMTRAPVVRFATAKRAAELKFFLENPENFETLSVIFNR 285


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