BLASTX nr result

ID: Coptis23_contig00007498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007498
         (1474 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]   340   6e-91
ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [V...   338   2e-90
emb|CBI31672.3| unnamed protein product [Vitis vinifera]              327   4e-87
ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-li...   318   2e-84
emb|CBI30569.3| unnamed protein product [Vitis vinifera]              317   7e-84

>emb|CAN79495.1| hypothetical protein VITISV_020749 [Vitis vinifera]
          Length = 338

 Score =  340 bits (872), Expect = 6e-91
 Identities = 185/344 (53%), Positives = 208/344 (60%), Gaps = 10/344 (2%)
 Frame = +3

Query: 96   MVFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 260
            MVFSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1    MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 261  ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 440
            ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61   ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 441  VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 617
            VGGGC             P T ERQ                D+IG               
Sbjct: 121  VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 618  XLHHLPDYGGADIGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 797
             LHHL DYG  DIGLNF GIQP +    GG S +D++F I                   A
Sbjct: 181  XLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 798  EQWRL---QQFPFIAGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 965
            EQWRL   QQFPF+AGLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237  EQWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 966  KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFTPSSTNHMI 1097
            K+E++QGLNLSR FLG+PGNDQY   N W DLSGF  S+T+H++
Sbjct: 295  KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSGFNSSTTSHLL 338


>ref|XP_002278642.1| PREDICTED: dof zinc finger protein DOF3.6 [Vitis vinifera]
          Length = 338

 Score =  338 bits (867), Expect = 2e-90
 Identities = 183/344 (53%), Positives = 206/344 (59%), Gaps = 10/344 (2%)
 Frame = +3

Query: 96   MVFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 260
            MVFSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1    MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 261  ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 440
            ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61   ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 441  VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 617
            VGGGC             P T ERQ                D+IG               
Sbjct: 121  VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 618  XLHHLPDYGGADIGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 797
             LHHL DYG  DIGLNF GIQP +    GG S +D++F I                   A
Sbjct: 181  PLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 798  EQWRL---QQFPFIAGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 965
            E WRL   QQFPF+AGLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237  EHWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 966  KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFTPSSTNHMI 1097
            K+E++QGLNLSR FLG+PGNDQY   N W DLSGF  S+T+H++
Sbjct: 295  KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSGFNSSTTSHLL 338


>emb|CBI31672.3| unnamed protein product [Vitis vinifera]
          Length = 337

 Score =  327 bits (839), Expect = 4e-87
 Identities = 179/334 (53%), Positives = 198/334 (59%), Gaps = 10/334 (2%)
 Frame = +3

Query: 96   MVFSSVLGYLDPPNWQQQGNYQHGNSSENXXXXXXXXXXXXX-----AGVGMGSIRPGSM 260
            MVFSSV  YLDPPNWQQQ N+Q G S++N                     G G+IRPGSM
Sbjct: 1    MVFSSVPVYLDPPNWQQQANHQPGGSNDNPHLPPQQAPPPLPPVGGGGSGGTGTIRPGSM 60

Query: 261  ADRARMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVP 440
            ADRAR+AK+PQPE ALKCPRCESTNTKFCYFNNYSLSQPRHFCK CRRYWTRGGALRNVP
Sbjct: 61   ADRARLAKLPQPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVP 120

Query: 441  VGGGCXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIG-XXXXXXXXXXXXXX 617
            VGGGC             P T ERQ                D+IG               
Sbjct: 121  VGGGCRRNKRSKGNRSKSPVTGERQGGSSSASAVPSNSCTSDMIGHLPPPPPPPQLSFLP 180

Query: 618  XLHHLPDYGGADIGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXA 797
             LHHL DYG  DIGLNF GIQP +    GG S +D++F I                   A
Sbjct: 181  PLHHLADYGAGDIGLNFGGIQPPVAVSGGGNSGTDIEFPI----GSCSGGGGPILSGGLA 236

Query: 798  EQWRL---QQFPFIAGLEPPPGLYPFEGEGVH-TTYAGGTSQFRARPPTSVATQGQFTPV 965
            E WRL   QQFPF+AGLEPP GLY FEGEG    +Y GG+   RA+   S  T  Q T V
Sbjct: 237  EHWRLQQVQQFPFLAGLEPPSGLYSFEGEGTEPPSYLGGSGHLRAKALDSGVT--QMTAV 294

Query: 966  KMEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSG 1067
            K+E++QGLNLSR FLG+PGNDQY   N W DLSG
Sbjct: 295  KIEENQGLNLSRNFLGLPGNDQYWSGNTWNDLSG 328


>ref|XP_002270031.1| PREDICTED: dof zinc finger protein DOF5.1-like [Vitis vinifera]
          Length = 333

 Score =  318 bits (815), Expect = 2e-84
 Identities = 176/341 (51%), Positives = 201/341 (58%), Gaps = 9/341 (2%)
 Frame = +3

Query: 96   MVFSSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXXAGVGMGSIRPGSMADRA 272
            MVFSS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRA
Sbjct: 1    MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 273  RMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 452
            R+A +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG
Sbjct: 61   RLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 120

Query: 453  CXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIGXXXXXXXXXXXXXXXLHHL 632
            C             P + +RQ                +I+G               LHHL
Sbjct: 121  CRRNKRSKGSSSKSPVSGDRQAGSSSTGAIHSNCSTAEILG--LAPQIPPMRFMAPLHHL 178

Query: 633  PDYGGADIGLNFSGIQPQMVAPTGGVSRSDMDFQI-----XXXXXXXXXXXXXXXXXXXA 797
             DYG  DIGLN+SGI P  V  TG     DM+FQI                         
Sbjct: 179  ADYGAGDIGLNYSGI-PTAVGGTG-----DMNFQIGSHLGGGSSGGAGGVGGSFLSVGGL 232

Query: 798  EQWRL---QQFPFIAGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVK 968
            EQWRL   QQFPF+ GL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VK
Sbjct: 233  EQWRLQQTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVK 290

Query: 969  MEDHQGLNLSRQFLGIPGNDQYLGSNAWTDLSGFTPSSTNH 1091
            MED+  +N++RQFLGIPGNDQY G NAWTDL+ F+ SST+H
Sbjct: 291  MEDNHEMNVARQFLGIPGNDQYWGGNAWTDLASFSSSSTSH 331


>emb|CBI30569.3| unnamed protein product [Vitis vinifera]
          Length = 323

 Score =  317 bits (811), Expect = 7e-84
 Identities = 175/334 (52%), Positives = 199/334 (59%), Gaps = 4/334 (1%)
 Frame = +3

Query: 96   MVFSSVLGYLDPPNWQQQGNYQHGNSS-ENXXXXXXXXXXXXXAGVGMGSIRPGSMADRA 272
            MVFSS+  YLDP NWQQ  N++ G+S   N              G G GSIRPGSMADRA
Sbjct: 1    MVFSSMPSYLDPANWQQPHNHEAGSSGLPNQPPPPPPPPPQPHGGGGTGSIRPGSMADRA 60

Query: 273  RMAKVPQPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 452
            R+A +P PEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG
Sbjct: 61   RLANIPLPEAALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGG 120

Query: 453  CXXXXXXXXXXXXXPNTAERQXXXXXXXXXXXXXXXXDIIGXXXXXXXXXXXXXXXLHHL 632
            C             P + +RQ                +I+G               LHHL
Sbjct: 121  CRRNKRSKGSSSKSPVSGDRQAGSSSTGAIHSNCSTAEILG--LAPQIPPMRFMAPLHHL 178

Query: 633  PDYGGADIGLNFSGIQPQMVAPTGGVSRSDMDFQIXXXXXXXXXXXXXXXXXXXAEQWRL 812
             DYG  DIGLN+SGI P  V  TG     DM+FQI                    EQWRL
Sbjct: 179  ADYGAGDIGLNYSGI-PTAVGGTG-----DMNFQI-----------------GSLEQWRL 215

Query: 813  ---QQFPFIAGLEPPPGLYPFEGEGVHTTYAGGTSQFRARPPTSVATQGQFTPVKMEDHQ 983
               QQFPF+ GL+PPPGLYP EG    + Y GG+SQ   RP  + +   Q   VKMED+ 
Sbjct: 216  QQTQQFPFLGGLDPPPGLYPLEGGVEPSNYVGGSSQ--VRPKLTGSGLSQVASVKMEDNH 273

Query: 984  GLNLSRQFLGIPGNDQYLGSNAWTDLSGFTPSST 1085
             +N++RQFLGIPGNDQY G NAWTDL+ F+ SST
Sbjct: 274  EMNVARQFLGIPGNDQYWGGNAWTDLASFSSSST 307


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