BLASTX nr result

ID: Coptis23_contig00007493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007493
         (1049 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246...   542   e-152
ref|XP_002524240.1| protein with unknown function [Ricinus commu...   532   e-149
emb|CBI31609.3| unnamed protein product [Vitis vinifera]              526   e-147
ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|2...   522   e-146
ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativ...   492   e-137

>ref|XP_002277667.2| PREDICTED: uncharacterized protein LOC100246247 [Vitis vinifera]
          Length = 805

 Score =  542 bits (1397), Expect = e-152
 Identities = 279/369 (75%), Positives = 308/369 (83%), Gaps = 20/369 (5%)
 Frame = +2

Query: 2    DLILHNLASGARATELKDPNEQVLRVLDYSRVSRHLLVTAGDDGSIHLWDTTGRNPKVSW 181
            DLILHNLASGARA ELKDPNEQV RVLDYSR+SRHLLVTAGDDGSIH+WDTTGR+PKVSW
Sbjct: 157  DLILHNLASGARAAELKDPNEQVSRVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSW 216

Query: 182  SKQHSAPTTGVCFSPSNDKIIATVGLDKKLYTFDSGSRRPTFCIPYEAPFSSLAFRDDGW 361
             KQHSAPT GV FSPSNDKIIATVGLDKKLYTFD+GSRRP+ CIPYEAPFSSLAFRDDG 
Sbjct: 217  LKQHSAPTAGVSFSPSNDKIIATVGLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGL 276

Query: 362  ILAAGTNNGRVVFYDVRGKPQPITALRAYSNSEAVTSLCWQRSKPNIVSEINCSAETALL 541
            ILAAGT+NGRVVFYDVRGKPQP T LRAYS+SEAVTSLCWQRSKP IV+E NC+ ETALL
Sbjct: 277  ILAAGTSNGRVVFYDVRGKPQPFTVLRAYSSSEAVTSLCWQRSKPVIVNESNCTPETALL 336

Query: 542  GGAGEDSILMPDPLPSVT----SLVGAVPGTRNLGRSSLSIDAPSV-------------L 670
            GGA EDSILMPDPLPSVT    SL  A+P +RN GRS  S +  S+             L
Sbjct: 337  GGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPGRSGPSTETSSLTAASGGSVSSSLYL 396

Query: 671  SAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPSVDKLWDGHDEG 847
            S  E+TP +NHL  GGTL+RLHAPR+  +FKDDMEVFSPLVD+QPITPS+DKLWD H+  
Sbjct: 397  STEEETPQKNHLRPGGTLARLHAPRSNYNFKDDMEVFSPLVDIQPITPSLDKLWDNHEAA 456

Query: 848  KKDTL--ERKPASLLFPSSMRRFPFAEQGGSNSHPIFDWKSSSTSKQDDTRSSLSLLGST 1021
            KKD L  ++KP+SLLFPSS RRFPF + G  + HPIFDWKSSSTS+QDDTR+SLSLLGST
Sbjct: 457  KKDHLPVDKKPSSLLFPSSSRRFPFVDDGAID-HPIFDWKSSSTSRQDDTRASLSLLGST 515

Query: 1022 PTASSKSDD 1048
            P  SSKS +
Sbjct: 516  PAPSSKSGE 524


>ref|XP_002524240.1| protein with unknown function [Ricinus communis]
            gi|223536517|gb|EEF38164.1| protein with unknown function
            [Ricinus communis]
          Length = 799

 Score =  532 bits (1371), Expect = e-149
 Identities = 276/370 (74%), Positives = 314/370 (84%), Gaps = 21/370 (5%)
 Frame = +2

Query: 2    DLILHNLASGARATELKDPNEQVLRVLDYSRVSRHLLVTAGDDGSIHLWDTTGRNPKVSW 181
            DLILHNLASGARA ELKDPNEQVLRVLDYSR+SRHLLVTAGDDGS+HLWDTTGRNPKVSW
Sbjct: 156  DLILHNLASGARAAELKDPNEQVLRVLDYSRISRHLLVTAGDDGSVHLWDTTGRNPKVSW 215

Query: 182  SKQHSAPTTGVCFSPSNDKIIATVGLDKKLYTFDSGSRRPTFCIPYEAPFSSLAFRDDGW 361
             KQHSAPT G+ FSPSNDKIIA+VGLDKKLYTFD+GSRRP+ CI YEAPFSSLAFRDDG 
Sbjct: 216  LKQHSAPTAGISFSPSNDKIIASVGLDKKLYTFDAGSRRPSSCISYEAPFSSLAFRDDGL 275

Query: 362  ILAAGTNNGRVVFYDVRGKPQPITALRAYSNSEAVTSLCWQRSKPNIVSEINCSAETALL 541
            ILAAGT++GRVVFYDVRGKPQP   LRA+S+SEAVTSLCWQRSKP +V+E NC+AETALL
Sbjct: 276  ILAAGTSSGRVVFYDVRGKPQPFNVLRAFSSSEAVTSLCWQRSKPVVVNESNCTAETALL 335

Query: 542  GGAGEDSILMPDPLPSVT----SLVGAVPGTRNLGRSSLSIDAPSV-------------L 670
            GGA EDSILMPDPLPSVT    SL   V  +RN GRSSLSI++ S+             L
Sbjct: 336  GGAIEDSILMPDPLPSVTLSSVSLSTVVSSSRNTGRSSLSIESSSLTSTSSGSASSIASL 395

Query: 671  SAAEDTPHRNHLWTGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPSVDKLWDGHDEG 847
            S AE+TPHRNHLW GGTLSRL+APR++ +FKDDM+VFSP+VDVQPITPS+DKLW  ++  
Sbjct: 396  SLAEETPHRNHLWLGGTLSRLNAPRSSYNFKDDMDVFSPVVDVQPITPSLDKLWGDNEGA 455

Query: 848  KKDTL--ERKPASLLFPSSMRRFPFAEQGGSNSHPIFDWKSSSTSKQDDTRSSLSLL-GS 1018
            KKD L  ++KP+S LF SS RRFPF+E  G+N HPIFDWK+SSTS+QD+TRSSLSLL GS
Sbjct: 456  KKDNLSVDKKPSS-LFSSSSRRFPFSED-GANDHPIFDWKTSSTSRQDETRSSLSLLGGS 513

Query: 1019 TPTASSKSDD 1048
            TP+ SS S++
Sbjct: 514  TPSPSSNSEE 523


>emb|CBI31609.3| unnamed protein product [Vitis vinifera]
          Length = 779

 Score =  526 bits (1355), Expect = e-147
 Identities = 271/356 (76%), Positives = 300/356 (84%), Gaps = 7/356 (1%)
 Frame = +2

Query: 2    DLILHNLASGARATELKDPNEQVLRVLDYSRVSRHLLVTAGDDGSIHLWDTTGRNPKVSW 181
            DLILHNLASGARA ELKDPNEQV RVLDYSR+SRHLLVTAGDDGSIH+WDTTGR+PKVSW
Sbjct: 156  DLILHNLASGARAAELKDPNEQVSRVLDYSRISRHLLVTAGDDGSIHMWDTTGRSPKVSW 215

Query: 182  SKQHSAPTTGVCFSPSNDKIIATVGLDKKLYTFDSGSRRPTFCIPYEAPFSSLAFRDDGW 361
             KQHSAPT GV FSPSNDKIIATVGLDKKLYTFD+GSRRP+ CIPYEAPFSSLAFRDDG 
Sbjct: 216  LKQHSAPTAGVSFSPSNDKIIATVGLDKKLYTFDTGSRRPSSCIPYEAPFSSLAFRDDGL 275

Query: 362  ILAAGTNNGRVVFYDVRGKPQPITALRAYSNSEAVTSLCWQRSKPNIVSEINCSAETALL 541
            ILAAGT+NGRVVFYDVRGKPQP T LRAYS+SEAVTSLCWQRSKP IV+E NC+ ETALL
Sbjct: 276  ILAAGTSNGRVVFYDVRGKPQPFTVLRAYSSSEAVTSLCWQRSKPVIVNESNCTPETALL 335

Query: 542  GGAGEDSILMPDPLPSVT----SLVGAVPGTRNLGRSSLSIDAPSVLSAAEDTPHRNHLW 709
            GGA EDSILMPDPLPSVT    SL  A+P +RN GRS  S +  S+ +A+          
Sbjct: 336  GGAVEDSILMPDPLPSVTSSSLSLSTAIPASRNPGRSGPSTETSSLTAAS---------- 385

Query: 710  TGGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPAS 880
              GTL+RLHAPR+  +FKDDMEVFSPLVD+QPITPS+DKLWD H+  KKD L  ++KP+S
Sbjct: 386  --GTLARLHAPRSNYNFKDDMEVFSPLVDIQPITPSLDKLWDNHEAAKKDHLPVDKKPSS 443

Query: 881  LLFPSSMRRFPFAEQGGSNSHPIFDWKSSSTSKQDDTRSSLSLLGSTPTASSKSDD 1048
            LLFPSS RRFPF + G  + HPIFDWKSSSTS+QDDTR+SLSLLGSTP  SSKS +
Sbjct: 444  LLFPSSSRRFPFVDDGAID-HPIFDWKSSSTSRQDDTRASLSLLGSTPAPSSKSGE 498


>ref|XP_002312120.1| predicted protein [Populus trichocarpa] gi|222851940|gb|EEE89487.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  522 bits (1345), Expect = e-146
 Identities = 268/355 (75%), Positives = 304/355 (85%), Gaps = 6/355 (1%)
 Frame = +2

Query: 2    DLILHNLASGARATELKDPNEQVLRVLDYSRVSRHLLVTAGDDGSIHLWDTTGRNPKVSW 181
            DLILHNLASGARATELKDPN+QVLRVLDYSRVSRHLLVTAGDDGS+HLWDTTGR+PKVSW
Sbjct: 157  DLILHNLASGARATELKDPNKQVLRVLDYSRVSRHLLVTAGDDGSVHLWDTTGRSPKVSW 216

Query: 182  SKQHSAPTTGVCFSPSNDKIIATVGLDKKLYTFDSGSRRPTFCIPYEAPFSSLAFRDDGW 361
            SKQHSAPT G+ FSPSNDKIIA+VGLDKKLYT+DSGSRR T  I YEAPFSSL+FRDDGW
Sbjct: 217  SKQHSAPTAGISFSPSNDKIIASVGLDKKLYTYDSGSRRHTSLISYEAPFSSLSFRDDGW 276

Query: 362  ILAAGTNNGRVVFYDVRGKPQPITALRAYSNSEAVTSLCWQRSKPNIVSEINCSAETALL 541
            +LAAGT++GRVVFYDVRGKPQP T LRAY +SEAVT LCWQRSKP IV+E NC+AE ALL
Sbjct: 277  VLAAGTSSGRVVFYDVRGKPQPFTVLRAYGSSEAVTGLCWQRSKPVIVNESNCTAEIALL 336

Query: 542  GGAGEDSILMPDPLPSVTS---LVGAVPGTRNLGRSSLSIDAPSVLSAAEDTPHRNHLWT 712
            GGA +DSILMPDPLPSVTS    + +V G+  +G  + SI     LS AE+TPHR+HLW 
Sbjct: 337  GGAVDDSILMPDPLPSVTSSSVALSSVSGSATVGGPASSIPN---LSLAEETPHRSHLWP 393

Query: 713  GGTLSRLHAPRTT-DFKDDMEVFSPLVDVQPITPSVDKLWDGHDEGKKDTL--ERKPASL 883
             GTL+RL+ PR++ +FKD+MEVFSPLVDVQPITPS+DK W  H+  KKD L  ++KP+SL
Sbjct: 394  -GTLTRLNPPRSSYNFKDEMEVFSPLVDVQPITPSLDKFWTDHEGLKKDNLPVDKKPSSL 452

Query: 884  LFPSSMRRFPFAEQGGSNSHPIFDWKSSSTSKQDDTRSSLSLLGSTPTASSKSDD 1048
            LFPSS RRFPFAE  G+N HPIFDWKSSSTS+QDDT+S  SL GSTPT SSKS+D
Sbjct: 453  LFPSSSRRFPFAED-GTNDHPIFDWKSSSTSRQDDTQSFTSLGGSTPTPSSKSED 506


>ref|XP_004138448.1| PREDICTED: protein NEDD1-like [Cucumis sativus]
            gi|449495290|ref|XP_004159790.1| PREDICTED: protein
            NEDD1-like [Cucumis sativus]
          Length = 799

 Score =  492 bits (1267), Expect = e-137
 Identities = 261/363 (71%), Positives = 296/363 (81%), Gaps = 14/363 (3%)
 Frame = +2

Query: 2    DLILHNLASGARATELKDPNEQVLRVLDYSRVSRHLLVTAGDDGSIHLWDTTGRNPKVSW 181
            DLILHNLASGARA ELKDPNEQVLRVLDYSR SRHLLVTAGDDG++HLWDTTGRNPK+SW
Sbjct: 159  DLILHNLASGARAAELKDPNEQVLRVLDYSRTSRHLLVTAGDDGTVHLWDTTGRNPKISW 218

Query: 182  SKQHSAPTTGVCFSPSNDKIIATVGLDKKLYTFDSGSRRPTFCIPYEAPFSSLAFRDDGW 361
             KQHSAPT G+ FSPSNDK  A+VGLDKKLYT+DSGSRRP+  I YEAPFSS+AFRDDG 
Sbjct: 219  QKQHSAPTAGIGFSPSNDKSFASVGLDKKLYTYDSGSRRPSSFIAYEAPFSSMAFRDDGL 278

Query: 362  ILAAGTNNGRVVFYDVRGKPQPITALRAYSNSEAVTSLCWQRSKPNIVSEINCSAETALL 541
            ILAAGT+NGRVVFYDVRGKP+P   LRAYS+SEAVTSL WQR KP IV+E NC+AE ALL
Sbjct: 279  ILAAGTSNGRVVFYDVRGKPEPYIVLRAYSSSEAVTSLSWQRLKPVIVNESNCTAEVALL 338

Query: 542  GGAGEDSILMPDPLPSVTSLVG---AVPGTRNLGRSSLSIDA-----PSVLSAAEDTPHR 697
            GGA EDSILMPDPLPSVT+  G   A  G+RN GRS  + +A      S  S AE+TP R
Sbjct: 339  GGAIEDSILMPDPLPSVTTSTGPLSATSGSRNPGRSGSTFEASLTETSSSFSTAEETPLR 398

Query: 698  NHLWTGGT--LSRLHAPRTT-DFKDDMEVFSPLVDVQPITPSVDKLWDGHDEGKKDT-LE 865
            +HL +GG+  L+RLHAPR++ +FKDDMEVFSPLVDVQPITPS+DKLWD H+  KKD   +
Sbjct: 399  SHLRSGGSLALARLHAPRSSYNFKDDMEVFSPLVDVQPITPSLDKLWDDHNGSKKDNPFD 458

Query: 866  RKPASLLFPSSMRRFPFAEQGGSNSHPIFDWKSSSTSKQDDTRSSLSLLGST--PTASSK 1039
            +KP S+LFPSS RRF   E G S+ HPIF+WKSSS SKQDD RSS   LGST  PT +SK
Sbjct: 459  KKPLSMLFPSSSRRFSSIEDGASD-HPIFNWKSSS-SKQDDIRSSSGQLGSTPAPTVNSK 516

Query: 1040 SDD 1048
            ++D
Sbjct: 517  NED 519


Top