BLASTX nr result

ID: Coptis23_contig00007479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007479
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82702.1| hypothetical protein VITISV_026468 [Vitis vinifera]   269   3e-70
emb|CBI35760.3| unnamed protein product [Vitis vinifera]              261   8e-68
ref|XP_002266557.2| PREDICTED: uncharacterized protein LOC100243...   259   3e-67
ref|XP_002301822.1| predicted protein [Populus trichocarpa] gi|2...   251   8e-65
ref|XP_002882529.1| hypothetical protein ARALYDRAFT_896908 [Arab...   242   3e-62

>emb|CAN82702.1| hypothetical protein VITISV_026468 [Vitis vinifera]
          Length = 266

 Score =  269 bits (687), Expect = 3e-70
 Identities = 126/149 (84%), Positives = 138/149 (92%), Gaps = 1/149 (0%)
 Frame = +2

Query: 134 QLRWARTGSGSGSYTRKNNKYPPS-LRKVDEKTEWWVVDGEMHEIGENVPPRERFVIPRD 310
           QLR+ART SGS    R+ +K+P S +RKVDEK+EWWVVDGEMHEIG+NVPPRERFVIPRD
Sbjct: 21  QLRFARTDSGSPVRPRRRSKFPASTMRKVDEKSEWWVVDGEMHEIGDNVPPRERFVIPRD 80

Query: 311 NIPNKRRKQMREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAK 490
           NIPNKRRKQ+REQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLA+
Sbjct: 81  NIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAQ 140

Query: 491 DHANYESAEDDDLDFSPYRRRRPNSEQVK 577
           DHANYESAEDDDLDFSPYRRR  + +Q+K
Sbjct: 141 DHANYESAEDDDLDFSPYRRRWTHDKQIK 169


>emb|CBI35760.3| unnamed protein product [Vitis vinifera]
          Length = 162

 Score =  261 bits (666), Expect = 8e-68
 Identities = 122/139 (87%), Positives = 131/139 (94%), Gaps = 1/139 (0%)
 Frame = +2

Query: 134 QLRWARTGSGSGSYTRKNNKYPPS-LRKVDEKTEWWVVDGEMHEIGENVPPRERFVIPRD 310
           QLR+ART SGS    R+ +K+P S +RKVDEK+EWWVVDGEMHEIG+NVPPRERFVIPRD
Sbjct: 21  QLRFARTDSGSPVRPRRRSKFPASTMRKVDEKSEWWVVDGEMHEIGDNVPPRERFVIPRD 80

Query: 311 NIPNKRRKQMREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAK 490
           NIPNKRRKQ+REQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLA+
Sbjct: 81  NIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAQ 140

Query: 491 DHANYESAEDDDLDFSPYR 547
           DHANYESAEDDDLDFSPYR
Sbjct: 141 DHANYESAEDDDLDFSPYR 159


>ref|XP_002266557.2| PREDICTED: uncharacterized protein LOC100243464, partial [Vitis
           vinifera]
          Length = 158

 Score =  259 bits (661), Expect = 3e-67
 Identities = 121/138 (87%), Positives = 130/138 (94%), Gaps = 1/138 (0%)
 Frame = +2

Query: 134 QLRWARTGSGSGSYTRKNNKYPPS-LRKVDEKTEWWVVDGEMHEIGENVPPRERFVIPRD 310
           QLR+ART SGS    R+ +K+P S +RKVDEK+EWWVVDGEMHEIG+NVPPRERFVIPRD
Sbjct: 21  QLRFARTDSGSPVRPRRRSKFPASTMRKVDEKSEWWVVDGEMHEIGDNVPPRERFVIPRD 80

Query: 311 NIPNKRRKQMREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAK 490
           NIPNKRRKQ+REQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLA+
Sbjct: 81  NIPNKRRKQLREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAQ 140

Query: 491 DHANYESAEDDDLDFSPY 544
           DHANYESAEDDDLDFSPY
Sbjct: 141 DHANYESAEDDDLDFSPY 158


>ref|XP_002301822.1| predicted protein [Populus trichocarpa] gi|222843548|gb|EEE81095.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  251 bits (640), Expect = 8e-65
 Identities = 117/149 (78%), Positives = 133/149 (89%), Gaps = 1/149 (0%)
 Frame = +2

Query: 134 QLRWARTGSGSGSYTRKNNKYPP-SLRKVDEKTEWWVVDGEMHEIGENVPPRERFVIPRD 310
           QLR  RTG+G     R+ +K PP + +K DEK++WW+VDGEMHEIGE+VPPRERFVIPRD
Sbjct: 21  QLRQLRTGAGPN---RRRSKSPPFAAKKTDEKSDWWIVDGEMHEIGEHVPPRERFVIPRD 77

Query: 311 NIPNKRRKQMREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAK 490
           N+PNKRRKQ+REQFMRRTRLV+KESEHEPWCKRYMELYQELRENWERLYWDEGYSKK+A+
Sbjct: 78  NVPNKRRKQLREQFMRRTRLVIKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKIAR 137

Query: 491 DHANYESAEDDDLDFSPYRRRRPNSEQVK 577
           DHANYESAEDDD DF+PYR +RP  EQVK
Sbjct: 138 DHANYESAEDDDQDFNPYRSKRP--EQVK 164


>ref|XP_002882529.1| hypothetical protein ARALYDRAFT_896908 [Arabidopsis lyrata subsp.
           lyrata] gi|297328369|gb|EFH58788.1| hypothetical protein
           ARALYDRAFT_896908 [Arabidopsis lyrata subsp. lyrata]
          Length = 235

 Score =  242 bits (618), Expect = 3e-62
 Identities = 113/149 (75%), Positives = 128/149 (85%), Gaps = 1/149 (0%)
 Frame = +2

Query: 134 QLRWARTGSGSGSYTRKNNKYPP-SLRKVDEKTEWWVVDGEMHEIGENVPPRERFVIPRD 310
           Q+R ART +G     R+ NK P   L+K +EK+EWW+VDGEMHEIG++VPPRERF IPRD
Sbjct: 22  QIRLARTEAGQ---PRRRNKLPSLPLKKKEEKSEWWIVDGEMHEIGDHVPPRERFTIPRD 78

Query: 311 NIPNKRRKQMREQFMRRTRLVLKESEHEPWCKRYMELYQELRENWERLYWDEGYSKKLAK 490
           NIPNKRRKQ+REQFMRRTRLVLKESEHEPWCK+YMELY ELRENWERLYWDEGYSKK+A 
Sbjct: 79  NIPNKRRKQLREQFMRRTRLVLKESEHEPWCKKYMELYNELRENWERLYWDEGYSKKIAS 138

Query: 491 DHANYESAEDDDLDFSPYRRRRPNSEQVK 577
           DHANYESAE+DD DF+PYR RR  S+Q K
Sbjct: 139 DHANYESAEEDDEDFNPYRNRRSYSDQTK 167


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