BLASTX nr result

ID: Coptis23_contig00007478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007478
         (612 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279963.2| PREDICTED: uncharacterized protein LOC100265...    84   3e-14
emb|CBI24231.3| unnamed protein product [Vitis vinifera]               84   3e-14
ref|XP_003519513.1| PREDICTED: uncharacterized protein LOC100805...    70   2e-10
ref|XP_003545402.1| PREDICTED: uncharacterized protein LOC100803...    64   2e-08

>ref|XP_002279963.2| PREDICTED: uncharacterized protein LOC100265339 [Vitis vinifera]
          Length = 528

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
 Frame = -3

Query: 547 EDPAGVANVSNKSRRIHGVSQMRGVEGMRSDSVSNRILHPYDAKVITKGSSHPKLHNRNS 368
           ED AG  +  N ++  + +    G+EGMR  SVSNR LHPY  KV ++            
Sbjct: 348 EDAAGETSFVNSNKN-YEMRSNPGIEGMRLSSVSNRRLHPYGGKVTSE------------ 394

Query: 367 PSSQRLHNLKDRSPMIVQYDECLGTE----------------RRQHSGMVKEEKLYGERR 236
            +   LH   D  P IVQ  E L ++                R Q   M K E++  ERR
Sbjct: 395 QTDSWLHEYDDIRPKIVQQKEYLKSKPSNLILQQSGSCDDEGRGQLRNMAKMEEVCRERR 454

Query: 235 KSEKFTNSIKVKMQQKSDRSWGKTSQSDEYLPQYYA-----STTPSPNGLLPRGDQIKGY 71
              ++++ +  K+Q  ++    K  + DE  P  YA     S TP+       G+QIKG 
Sbjct: 455 AMREYSDPVGEKVQPTNEMRVAKRVR-DESPPLDYAKKSSFSETPT------WGNQIKGS 507

Query: 70  VGEMPTSFSDDETALTSSSMD 8
             EMP+SFS+DETA TSSSMD
Sbjct: 508 AMEMPSSFSEDETAETSSSMD 528


>emb|CBI24231.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 70/201 (34%), Positives = 96/201 (47%), Gaps = 21/201 (10%)
 Frame = -3

Query: 547 EDPAGVANVSNKSRRIHGVSQMRGVEGMRSDSVSNRILHPYDAKVITKGSSHPKLHNRNS 368
           ED AG  +  N ++  + +    G+EGMR  SVSNR LHPY  KV ++            
Sbjct: 329 EDAAGETSFVNSNKN-YEMRSNPGIEGMRLSSVSNRRLHPYGGKVTSE------------ 375

Query: 367 PSSQRLHNLKDRSPMIVQYDECLGTE----------------RRQHSGMVKEEKLYGERR 236
            +   LH   D  P IVQ  E L ++                R Q   M K E++  ERR
Sbjct: 376 QTDSWLHEYDDIRPKIVQQKEYLKSKPSNLILQQSGSCDDEGRGQLRNMAKMEEVCRERR 435

Query: 235 KSEKFTNSIKVKMQQKSDRSWGKTSQSDEYLPQYYA-----STTPSPNGLLPRGDQIKGY 71
              ++++ +  K+Q  ++    K  + DE  P  YA     S TP+       G+QIKG 
Sbjct: 436 AMREYSDPVGEKVQPTNEMRVAKRVR-DESPPLDYAKKSSFSETPT------WGNQIKGS 488

Query: 70  VGEMPTSFSDDETALTSSSMD 8
             EMP+SFS+DETA TSSSMD
Sbjct: 489 AMEMPSSFSEDETAETSSSMD 509


>ref|XP_003519513.1| PREDICTED: uncharacterized protein LOC100805913 [Glycine max]
          Length = 526

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 61/184 (33%), Positives = 92/184 (50%), Gaps = 4/184 (2%)
 Frame = -3

Query: 547 EDPAGVANVSNKSRRIHGVSQMRGVEGMRSDSVSNRILHPYDAKVITKGSSHPKLH---N 377
           ED  G A+  N S + H +S   GVEGMRSDS SN   H Y+ K+  K  +   LH   N
Sbjct: 349 EDSTGEASAYN-SNKSHRMSTKHGVEGMRSDSASNHSDH-YEEKLTVKQKTL-MLHGYDN 405

Query: 376 RNSPSSQRLHNLKDRSPMIVQYDEC-LGTERRQHSGMVKEEKLYGERRKSEKFTNSIKVK 200
            N  + QR  ++K +    +      + TE R  S  + +E+++   RK++     ++  
Sbjct: 406 INPKNIQRSEHVKSKPSSSIHNSRVPMDTEERGLSARMAKEEMFKGNRKAKNTYCDVEGA 465

Query: 199 MQQKSDRSWGKTSQSDEYLPQYYASTTPSPNGLLPRGDQIKGYVGEMPTSFSDDETALTS 20
               ++    K ++ D  L QY    +P     L +   I+  V EMP+SFS+DETA TS
Sbjct: 466 GMLSNEIMVAKRAKVD-MLQQYNVKKSPVAEMELKK---IQRSVAEMPSSFSEDETADTS 521

Query: 19  SSMD 8
           SS+D
Sbjct: 522 SSLD 525


>ref|XP_003545402.1| PREDICTED: uncharacterized protein LOC100803515 [Glycine max]
          Length = 527

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 61/184 (33%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
 Frame = -3

Query: 547 EDPAGVANVSNKSRRIHGVSQMRGVEGMRSDSVSNRILHPYDAK--VITKGSSHPKLHNR 374
           ED  G A+  N S + H +S   GVEGMRSDS SN   H Y+ K  V  KG       N 
Sbjct: 350 EDSTGEASAYN-STKSHRMSTKHGVEGMRSDSASNHSDH-YEEKLAVKQKGLMLHGYDNI 407

Query: 373 NSPSSQRLHNLKDRSPMIVQYDEC-LGTERRQHSG-MVKEEKLYGERRKSEKFTNSIKVK 200
           N  + QR  ++K +    ++     + TE R  S  M KEE   G+R+    + N     
Sbjct: 408 NLKNMQRSEHVKSKPSSSIRNSRVPMDTEERGLSARMAKEEMFKGDRKAKNTYCNVDGAG 467

Query: 199 MQQKSDRSWGKTSQSDEYLPQYYASTTPSPNGLLPRGDQIKGYVGEMPTSFSDDETALTS 20
           M   ++    K ++ D  L QY    +P          +I+    ++P+SFS+DETA T+
Sbjct: 468 M-LSNEIMVAKRAKVD-MLQQYNVKKSPVAE---MEQRKIQRSAADLPSSFSEDETADTN 522

Query: 19  SSMD 8
           SS+D
Sbjct: 523 SSLD 526


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