BLASTX nr result

ID: Coptis23_contig00007450 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007450
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331483.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_002523736.1| conserved hypothetical protein [Ricinus comm...   114   1e-23
ref|XP_003606323.1| hypothetical protein MTR_4g057190 [Medicago ...   111   7e-23
ref|NP_001052133.1| Os04g0165500 [Oryza sativa Japonica Group] g...   111   7e-23
tpg|DAA38643.1| TPA: hypothetical protein ZEAMMB73_904871 [Zea m...   110   2e-22

>ref|XP_002331483.1| predicted protein [Populus trichocarpa] gi|222873561|gb|EEF10692.1|
           predicted protein [Populus trichocarpa]
          Length = 70

 Score =  114 bits (286), Expect = 6e-24
 Identities = 51/69 (73%), Positives = 62/69 (89%)
 Frame = +2

Query: 38  MSRLRNAVLATGLVAFASAGMAFPFFMATANNKPVIDSTKPLPPQATFRGPYINTGSRDI 217
           M+R RN ++ATGL+AFA+AG+AFPF+MA++  KPVID +KPLPPQATFRGPYINTGSRDI
Sbjct: 1   MTRTRNVIVATGLLAFAAAGLAFPFYMASSRGKPVIDPSKPLPPQATFRGPYINTGSRDI 60

Query: 218 GPDHGTHPK 244
           GPD G +PK
Sbjct: 61  GPDPGPYPK 69


>ref|XP_002523736.1| conserved hypothetical protein [Ricinus communis]
           gi|223537040|gb|EEF38676.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 70

 Score =  114 bits (284), Expect = 1e-23
 Identities = 51/69 (73%), Positives = 63/69 (91%)
 Frame = +2

Query: 38  MSRLRNAVLATGLVAFASAGMAFPFFMATANNKPVIDSTKPLPPQATFRGPYINTGSRDI 217
           M+R RNA++A GLVAFA+AG+AFPF+MA++ + PVIDS+KPLPPQATFRGPYINTGSRDI
Sbjct: 1   MTRSRNAIVAAGLVAFAAAGLAFPFYMASSRSSPVIDSSKPLPPQATFRGPYINTGSRDI 60

Query: 218 GPDHGTHPK 244
           GPDH ++ K
Sbjct: 61  GPDHQSYSK 69


>ref|XP_003606323.1| hypothetical protein MTR_4g057190 [Medicago truncatula]
           gi|355507378|gb|AES88520.1| hypothetical protein
           MTR_4g057190 [Medicago truncatula]
          Length = 204

 Score =  111 bits (277), Expect = 7e-23
 Identities = 55/74 (74%), Positives = 63/74 (85%)
 Frame = +2

Query: 38  MSRLRNAVLATGLVAFASAGMAFPFFMATANNKPVIDSTKPLPPQATFRGPYINTGSRDI 217
           MSR RN V+A GL+AFASAGMAFPF+MA++  KPVID TKPL PQATFRGPYINTGSRDI
Sbjct: 1   MSRRRNLVVAAGLLAFASAGMAFPFYMASSK-KPVIDPTKPLSPQATFRGPYINTGSRDI 59

Query: 218 GPDHGTHPKL*FIV 259
           GPDH T+ K  F++
Sbjct: 60  GPDHETYKKKSFVM 73


>ref|NP_001052133.1| Os04g0165500 [Oryza sativa Japonica Group]
           gi|38346459|emb|CAE02115.2| OSJNBa0019G23.7 [Oryza
           sativa Japonica Group] gi|90265114|emb|CAC09476.2|
           H0806H05.9 [Oryza sativa Indica Group]
           gi|113563704|dbj|BAF14047.1| Os04g0165500 [Oryza sativa
           Japonica Group] gi|125547185|gb|EAY93007.1| hypothetical
           protein OsI_14806 [Oryza sativa Indica Group]
           gi|125589365|gb|EAZ29715.1| hypothetical protein
           OsJ_13778 [Oryza sativa Japonica Group]
           gi|215740446|dbj|BAG97102.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 70

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/69 (69%), Positives = 60/69 (86%)
 Frame = +2

Query: 38  MSRLRNAVLATGLVAFASAGMAFPFFMATANNKPVIDSTKPLPPQATFRGPYINTGSRDI 217
           MS+ RN ++ATGL+AFA AG+AFPF+   + NKP+IDS+KPLPPQATFRGPY+NTGSRDI
Sbjct: 1   MSKARNVLVATGLLAFAGAGLAFPFYFVKSKNKPIIDSSKPLPPQATFRGPYVNTGSRDI 60

Query: 218 GPDHGTHPK 244
           GPD+  +PK
Sbjct: 61  GPDYTDYPK 69


>tpg|DAA38643.1| TPA: hypothetical protein ZEAMMB73_904871 [Zea mays]
          Length = 70

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/69 (71%), Positives = 58/69 (84%)
 Frame = +2

Query: 38  MSRLRNAVLATGLVAFASAGMAFPFFMATANNKPVIDSTKPLPPQATFRGPYINTGSRDI 217
           MS+ RNAV+ATGL+ FA AG++FPF    + NKP+IDSTKPLPPQATFRGPY+NTGSRDI
Sbjct: 1   MSKARNAVVATGLLLFAGAGLSFPFLFVKSKNKPIIDSTKPLPPQATFRGPYVNTGSRDI 60

Query: 218 GPDHGTHPK 244
           GPD   +PK
Sbjct: 61  GPDPTNYPK 69


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