BLASTX nr result

ID: Coptis23_contig00007448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007448
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   179   2e-43
ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [V...   178   5e-43
emb|CBI40077.3| unnamed protein product [Vitis vinifera]              178   5e-43
ref|XP_002318704.1| global transcription factor group [Populus t...   176   2e-42
ref|XP_002509565.1| bromodomain-containing protein, putative [Ri...   176   3e-42

>ref|XP_002279401.2| PREDICTED: LOW QUALITY PROTEIN: transcription factor GTE10-like
           [Vitis vinifera]
          Length = 770

 Score =  179 bits (454), Expect = 2e-43
 Identities = 98/179 (54%), Positives = 122/179 (68%), Gaps = 1/179 (0%)
 Frame = -1

Query: 534 YNPPTNDVHIMAKTLSKFFEVRWKNIQKKLPAIESVQ-VPAKSTVTREXXXXXXXXXXXX 358
           YNP  NDVH MA+TL+KFFE+RWK I+KKLP    V+ +P++S    E            
Sbjct: 287 YNPRGNDVHFMAETLNKFFEMRWKPIEKKLPVTIDVESLPSRSDAHLEIETADRMPPSKK 346

Query: 357 XKHLLIDHEVKTEPVKTERIMTERDKVNLSRDLESLLAELPNHIIDFLREHSFSEGQTDG 178
            K    DH++K EP K  RIMT+ ++ NL  +LE+LL ELP+ I+DFL+E SF+E Q   
Sbjct: 347 KKVAPTDHKIKMEPNK--RIMTKEERHNLGTELETLLGELPDDIVDFLKEQSFNENQAS- 403

Query: 177 EDEMEVDIDVLSDDTLFTLRKLVDNYLQEKLSNRAKNEPGEVEVLNVSGISNSSMQPCK 1
           EDE+E+DID LSDDTLFTLRKL+D YL EK  N  K EP E+E+ N SG SNSSMQPCK
Sbjct: 404 EDEIEIDIDALSDDTLFTLRKLLDGYLLEKQKNLTKTEPCEMELRNESGFSNSSMQPCK 462


>ref|XP_002270843.2| PREDICTED: transcription factor GTE8-like [Vitis vinifera]
          Length = 739

 Score =  178 bits (451), Expect = 5e-43
 Identities = 97/178 (54%), Positives = 119/178 (66%)
 Frame = -1

Query: 534 YNPPTNDVHIMAKTLSKFFEVRWKNIQKKLPAIESVQVPAKSTVTREXXXXXXXXXXXXX 355
           +NPP NDVH MA TLSKFFEVRWK I+KKLP  ++  +P K     E             
Sbjct: 250 FNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGTHGEMKTAKPMPPSKKR 309

Query: 354 KHLLIDHEVKTEPVKTERIMTERDKVNLSRDLESLLAELPNHIIDFLREHSFSEGQTDGE 175
           K     HEV  EPV  +++MT  +K NL RDLE LL E+P  IIDFLR HS +  +T  +
Sbjct: 310 KVTSTHHEVIQEPV--QKVMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGED 367

Query: 174 DEMEVDIDVLSDDTLFTLRKLVDNYLQEKLSNRAKNEPGEVEVLNVSGISNSSMQPCK 1
           DE+EVDI+ LSDDTLFTLRKL+D+YLQEK  +  K EP E+E+L+ SG SNSS+QPCK
Sbjct: 368 DEIEVDIEALSDDTLFTLRKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPCK 425


>emb|CBI40077.3| unnamed protein product [Vitis vinifera]
          Length = 714

 Score =  178 bits (451), Expect = 5e-43
 Identities = 97/178 (54%), Positives = 119/178 (66%)
 Frame = -1

Query: 534 YNPPTNDVHIMAKTLSKFFEVRWKNIQKKLPAIESVQVPAKSTVTREXXXXXXXXXXXXX 355
           +NPP NDVH MA TLSKFFEVRWK I+KKLP  ++  +P K     E             
Sbjct: 227 FNPPGNDVHKMADTLSKFFEVRWKTIEKKLPVTKTQSLPGKYGTHGEMKTAKPMPPSKKR 286

Query: 354 KHLLIDHEVKTEPVKTERIMTERDKVNLSRDLESLLAELPNHIIDFLREHSFSEGQTDGE 175
           K     HEV  EPV  +++MT  +K NL RDLE LL E+P  IIDFLR HS +  +T  +
Sbjct: 287 KVTSTHHEVIQEPV--QKVMTADEKRNLGRDLEDLLGEIPVQIIDFLRVHSSNGRETGED 344

Query: 174 DEMEVDIDVLSDDTLFTLRKLVDNYLQEKLSNRAKNEPGEVEVLNVSGISNSSMQPCK 1
           DE+EVDI+ LSDDTLFTLRKL+D+YLQEK  +  K EP E+E+L+ SG SNSS+QPCK
Sbjct: 345 DEIEVDIEALSDDTLFTLRKLLDDYLQEKQKSHGKAEPCEIELLHDSGPSNSSIQPCK 402


>ref|XP_002318704.1| global transcription factor group [Populus trichocarpa]
           gi|222859377|gb|EEE96924.1| global transcription factor
           group [Populus trichocarpa]
          Length = 613

 Score =  176 bits (447), Expect = 2e-42
 Identities = 96/187 (51%), Positives = 127/187 (67%), Gaps = 9/187 (4%)
 Frame = -1

Query: 534 YNPPTNDVHIMAKTLSKFFEVRWKNIQKKLPAIESVQ-VPAKSTVTREXXXXXXXXXXXX 358
           YNPP ND H MA+TLSKFFEVRWK I+KK+P    V+ VP+++ V  E            
Sbjct: 170 YNPPGNDFHFMAETLSKFFEVRWKVIEKKIPVTADVEPVPSRADVRMEMETTAHIEKETT 229

Query: 357 XKHLLI--------DHEVKTEPVKTERIMTERDKVNLSRDLESLLAELPNHIIDFLREHS 202
                +        D++VK  P++  ++MT  ++  LS +LE+LLAELP +II+FL+EHS
Sbjct: 230 TDTPPLKKKKITPSDNKVKPGPIR--KVMTNEERQKLSMELEALLAELPENIIEFLKEHS 287

Query: 201 FSEGQTDGEDEMEVDIDVLSDDTLFTLRKLVDNYLQEKLSNRAKNEPGEVEVLNVSGISN 22
            + GQT GEDE+E+DID L DD LF LRKL+DNYL EK  N++K EP E+E++N SGISN
Sbjct: 288 GNAGQT-GEDEIEIDIDALGDDILFNLRKLLDNYLLEKQKNQSKVEPCEMEIINESGISN 346

Query: 21  SSMQPCK 1
           SS+QPCK
Sbjct: 347 SSLQPCK 353


>ref|XP_002509565.1| bromodomain-containing protein, putative [Ricinus communis]
           gi|223549464|gb|EEF50952.1| bromodomain-containing
           protein, putative [Ricinus communis]
          Length = 718

 Score =  176 bits (445), Expect = 3e-42
 Identities = 98/178 (55%), Positives = 126/178 (70%)
 Frame = -1

Query: 534 YNPPTNDVHIMAKTLSKFFEVRWKNIQKKLPAIESVQVPAKSTVTREXXXXXXXXXXXXX 355
           YNP  +DVHIMA TLSKFFEVRWK I+KKLP I++  +P+KS   RE             
Sbjct: 181 YNPKGSDVHIMADTLSKFFEVRWKAIEKKLPKIDTHGLPSKSG-PREDLQITEISPIKKR 239

Query: 354 KHLLIDHEVKTEPVKTERIMTERDKVNLSRDLESLLAELPNHIIDFLREHSFSEGQTDGE 175
           K     HE+   PV+  R+MT+ +K  L ++LESLL E+P HIIDFL++HS S G+  GE
Sbjct: 240 KISSYQHEIVAVPVR--RVMTDDEKQKLGKELESLLGEMPIHIIDFLKDHS-SNGRDAGE 296

Query: 174 DEMEVDIDVLSDDTLFTLRKLVDNYLQEKLSNRAKNEPGEVEVLNVSGISNSSMQPCK 1
           DE+E+DID LSDDTLFTLR+L+D+YL EK  ++A+ EP E+E+LN SG+SNSSMQ  K
Sbjct: 297 DEIEIDIDDLSDDTLFTLRRLLDDYLLEKQKSQARVEPCEIELLNESGLSNSSMQQQK 354


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