BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007442
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525054.1| run and tbc1 domain containing 3, plant, put...    64   5e-16
ref|XP_003568275.1| PREDICTED: uncharacterized protein LOC100832...    66   2e-12
gb|AAN64504.1| putative lyncein [Oryza sativa Japonica Group]          66   2e-10
ref|XP_003558188.1| PREDICTED: uncharacterized protein LOC100840...    66   2e-10
gb|AFW88762.1| hypothetical protein ZEAMMB73_952785 [Zea mays]         66   2e-10

>ref|XP_002525054.1| run and tbc1 domain containing 3, plant, putative [Ricinus
           communis] gi|223535635|gb|EEF37301.1| run and tbc1
           domain containing 3, plant, putative [Ricinus communis]
          Length = 845

 Score = 63.9 bits (154), Expect(3) = 5e-16
 Identities = 27/30 (90%), Positives = 28/30 (93%)
 Frame = +3

Query: 567 EKWKGQIEKDLPQTFPGHPTLDEDGRNALR 656
           EKWKGQIEKDLP+TFPGHP LD DGRNALR
Sbjct: 290 EKWKGQIEKDLPRTFPGHPALDNDGRNALR 319



 Score = 40.4 bits (93), Expect(3) = 5e-16
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 16/126 (12%)
 Frame = +2

Query: 128 SSSGRGNFEVDTKDVFYDVDKTDPVQDGALVD-----------CQGVYLESTSVRKKSWS 274
           + S +G  E D++D FYDV+++DPVQD +  D             G  LES    K+   
Sbjct: 166 AKSAKGASEEDSEDEFYDVERSDPVQDNSSSDGVSVSGTGATAADGTPLESYFPWKEELE 225

Query: 275 VLFMGEY-QCL*GSCGKPLLVYEI-VM*THYQELLASNQNGCYCEKCDNSISETTNSK-- 442
           VL  G     L G   +  +   +  +  +YQ+LLAS  N        N++ + ++S   
Sbjct: 226 VLVRGGVPMALRGELWQAFVGVRVRRVDKYYQDLLASETNS------GNNVEQQSDSDAK 279

Query: 443 -SSTEP 457
            S+T+P
Sbjct: 280 VSTTDP 285



 Score = 25.4 bits (54), Expect(3) = 5e-16
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 658 RLLTPYAWHNPFVG 699
           RLLT YA HNP VG
Sbjct: 320 RLLTAYARHNPSVG 333


>ref|XP_003568275.1| PREDICTED: uncharacterized protein LOC100832139 [Brachypodium
           distachyon]
          Length = 827

 Score = 66.2 bits (160), Expect(3) = 2e-12
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = +3

Query: 567 EKWKGQIEKDLPQTFPGHPTLDEDGRNALR 656
           EKWKGQIEKDLP+TFPGHP+LDEDGRNALR
Sbjct: 256 EKWKGQIEKDLPRTFPGHPSLDEDGRNALR 285



 Score = 28.1 bits (61), Expect(3) = 2e-12
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
 Frame = +2

Query: 143 GNFEVDTKDVFYDVDKTDPVQDGALVDCQGVYLEST------SVRKKSWSVLFMGEYQCL 304
           G    D+ D FYD DK DP Q+    D     + +T      S++++   ++  G    L
Sbjct: 144 GKVSGDSDDEFYDADKVDPSQEMQSGDSGNAEIGNTGQEDKYSLKEELECLVHGGLPMAL 203

Query: 305 *GSCGKPLLVYEIVM*THYQELLASNQNGCYCEKCDNSISETTNSKSS 448
            G   +  +  E      Y + L   +      + D+S SE  + K S
Sbjct: 204 RGELWQAFVGVEARRVNGYYDSLLVTEGELEDGRLDSSTSEGVDEKLS 251



 Score = 23.1 bits (48), Expect(3) = 2e-12
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +1

Query: 658 RLLTPYAWHNPFVG 699
           RLL  YA HNP VG
Sbjct: 286 RLLLAYARHNPTVG 299


>gb|AAN64504.1| putative lyncein [Oryza sativa Japonica Group]
          Length = 892

 Score = 65.9 bits (159), Expect(2) = 2e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 567 EKWKGQIEKDLPQTFPGHPTLDEDGRNALR 656
           EKWKGQIEKDLP+TFPGHP LDEDGRNALR
Sbjct: 390 EKWKGQIEKDLPRTFPGHPALDEDGRNALR 419



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 658 RLLTPYAWHNPFVG 699
           RLLT YA HNP VG
Sbjct: 420 RLLTAYARHNPSVG 433


>ref|XP_003558188.1| PREDICTED: uncharacterized protein LOC100840960 [Brachypodium
           distachyon]
          Length = 882

 Score = 65.9 bits (159), Expect(2) = 2e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 567 EKWKGQIEKDLPQTFPGHPTLDEDGRNALR 656
           EKWKGQIEKDLP+TFPGHP LDEDGRNALR
Sbjct: 385 EKWKGQIEKDLPRTFPGHPALDEDGRNALR 414



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 658 RLLTPYAWHNPFVG 699
           RLLT YA HNP VG
Sbjct: 415 RLLTAYARHNPSVG 428


>gb|AFW88762.1| hypothetical protein ZEAMMB73_952785 [Zea mays]
          Length = 873

 Score = 65.9 bits (159), Expect(2) = 2e-10
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 567 EKWKGQIEKDLPQTFPGHPTLDEDGRNALR 656
           EKWKGQIEKDLP+TFPGHP LDEDGRNALR
Sbjct: 372 EKWKGQIEKDLPRTFPGHPALDEDGRNALR 401



 Score = 25.4 bits (54), Expect(2) = 2e-10
 Identities = 11/14 (78%), Positives = 11/14 (78%)
 Frame = +1

Query: 658 RLLTPYAWHNPFVG 699
           RLLT YA HNP VG
Sbjct: 402 RLLTAYARHNPSVG 415