BLASTX nr result

ID: Coptis23_contig00007440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007440
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277268.2| PREDICTED: seed maturation protein PM36 [Vit...    78   6e-30
emb|CBI22896.3| unnamed protein product [Vitis vinifera]               78   1e-28
ref|NP_001049891.1| Os03g0306900 [Oryza sativa Japonica Group] g...    76   9e-28
ref|XP_002311391.1| predicted protein [Populus trichocarpa] gi|2...    80   9e-28
gb|ABF95534.1| Seed maturation protein PM36, putative, expressed...    76   9e-28

>ref|XP_002277268.2| PREDICTED: seed maturation protein PM36 [Vitis vinifera]
          Length = 225

 Score = 78.2 bits (191), Expect(2) = 6e-30
 Identities = 34/44 (77%), Positives = 38/44 (86%)
 Frame = +3

Query: 6   KHSSMYNKATKHPFILSIRDGTVDLSSFKRWLGQDYLFVREFVP 137
           KH  +Y +ATKHP ILSIRDGT+D SSFKRWLGQDY+FVR FVP
Sbjct: 19  KHRMLYIRATKHPLILSIRDGTIDFSSFKRWLGQDYIFVRAFVP 62



 Score = 77.8 bits (190), Expect(2) = 6e-30
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 220 FLASLLLKACKESDDDGSDMEILLGGMASLNDEISWFKKEALKWNILLST 369
           F AS+LLKACKESD+  SDME++LGGMASLNDEI+WFKKEA KW + LST
Sbjct: 63  FSASVLLKACKESDNS-SDMEVILGGMASLNDEIAWFKKEASKWGLELST 111


>emb|CBI22896.3| unnamed protein product [Vitis vinifera]
          Length = 204

 Score = 77.8 bits (190), Expect(2) = 1e-28
 Identities = 38/50 (76%), Positives = 44/50 (88%)
 Frame = +1

Query: 220 FLASLLLKACKESDDDGSDMEILLGGMASLNDEISWFKKEALKWNILLST 369
           F AS+LLKACKESD+  SDME++LGGMASLNDEI+WFKKEA KW + LST
Sbjct: 42  FSASVLLKACKESDNS-SDMEVILGGMASLNDEIAWFKKEASKWGLELST 90



 Score = 73.9 bits (180), Expect(2) = 1e-28
 Identities = 32/40 (80%), Positives = 36/40 (90%)
 Frame = +3

Query: 18  MYNKATKHPFILSIRDGTVDLSSFKRWLGQDYLFVREFVP 137
           +Y +ATKHP ILSIRDGT+D SSFKRWLGQDY+FVR FVP
Sbjct: 2   LYIRATKHPLILSIRDGTIDFSSFKRWLGQDYIFVRAFVP 41


>ref|NP_001049891.1| Os03g0306900 [Oryza sativa Japonica Group]
           gi|108707738|gb|ABF95533.1| Seed maturation protein
           PM36, putative, expressed [Oryza sativa Japonica Group]
           gi|113548362|dbj|BAF11805.1| Os03g0306900 [Oryza sativa
           Japonica Group] gi|125585994|gb|EAZ26658.1| hypothetical
           protein OsJ_10561 [Oryza sativa Japonica Group]
           gi|215707098|dbj|BAG93558.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218192659|gb|EEC75086.1| hypothetical protein
           OsI_11238 [Oryza sativa Indica Group]
          Length = 233

 Score = 75.9 bits (185), Expect(2) = 9e-28
 Identities = 31/43 (72%), Positives = 39/43 (90%)
 Frame = +3

Query: 6   KHSSMYNKATKHPFILSIRDGTVDLSSFKRWLGQDYLFVREFV 134
           +H  MY +AT+HPF +SIRDGTVDLS+F+RWLGQDY+FV+EFV
Sbjct: 26  RHRGMYERATRHPFTVSIRDGTVDLSAFRRWLGQDYMFVKEFV 68



 Score = 72.8 bits (177), Expect(2) = 9e-28
 Identities = 34/49 (69%), Positives = 44/49 (89%)
 Frame = +1

Query: 220 FLASLLLKACKESDDDGSDMEILLGGMASLNDEISWFKKEALKWNILLS 366
           FLAS+LLK C++SD  GSDMEI+LGG+ASL+DE+SWFKKEA KW++ L+
Sbjct: 70  FLASVLLKCCRQSD--GSDMEIILGGLASLSDELSWFKKEAEKWSVNLA 116


>ref|XP_002311391.1| predicted protein [Populus trichocarpa] gi|222851211|gb|EEE88758.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 80.5 bits (197), Expect(2) = 9e-28
 Identities = 35/44 (79%), Positives = 39/44 (88%)
 Frame = +3

Query: 6   KHSSMYNKATKHPFILSIRDGTVDLSSFKRWLGQDYLFVREFVP 137
           KH  +Y  AT+HPFILSIRDGT+D SSFKRWLGQDY+FVREFVP
Sbjct: 16  KHLVLYTGATRHPFILSIRDGTIDFSSFKRWLGQDYIFVREFVP 59



 Score = 68.2 bits (165), Expect(2) = 9e-28
 Identities = 33/49 (67%), Positives = 42/49 (85%)
 Frame = +1

Query: 220 FLASLLLKACKESDDDGSDMEILLGGMASLNDEISWFKKEALKWNILLS 366
           F AS+LLKA K SDD+ SDME++L G+ASL+DEISWFK+EA KW++ LS
Sbjct: 60  FAASVLLKASKNSDDN-SDMEVILSGLASLSDEISWFKQEAAKWDVPLS 107


>gb|ABF95534.1| Seed maturation protein PM36, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 224

 Score = 75.9 bits (185), Expect(2) = 9e-28
 Identities = 31/43 (72%), Positives = 39/43 (90%)
 Frame = +3

Query: 6   KHSSMYNKATKHPFILSIRDGTVDLSSFKRWLGQDYLFVREFV 134
           +H  MY +AT+HPF +SIRDGTVDLS+F+RWLGQDY+FV+EFV
Sbjct: 17  RHRGMYERATRHPFTVSIRDGTVDLSAFRRWLGQDYMFVKEFV 59



 Score = 72.8 bits (177), Expect(2) = 9e-28
 Identities = 34/49 (69%), Positives = 44/49 (89%)
 Frame = +1

Query: 220 FLASLLLKACKESDDDGSDMEILLGGMASLNDEISWFKKEALKWNILLS 366
           FLAS+LLK C++SD  GSDMEI+LGG+ASL+DE+SWFKKEA KW++ L+
Sbjct: 61  FLASVLLKCCRQSD--GSDMEIILGGLASLSDELSWFKKEAEKWSVNLA 107


Top