BLASTX nr result
ID: Coptis23_contig00007426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007426
(1498 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|2... 317 5e-84
ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-li... 315 2e-83
ref|XP_002514953.1| GDP-mannose transporter, putative [Ricinus c... 313 6e-83
ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidops... 313 1e-82
ref|XP_002889076.1| integral membrane family protein [Arabidopsi... 313 1e-82
>ref|XP_002314544.1| predicted protein [Populus trichocarpa] gi|222863584|gb|EEF00715.1|
predicted protein [Populus trichocarpa]
Length = 371
Score = 317 bits (812), Expect = 5e-84
Identities = 151/174 (86%), Positives = 166/174 (95%)
Frame = -1
Query: 1492 SVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLD 1313
S+YGIAAGYCISASLLSIINKWA+MKFPYPGALTALQYFTSAAGVL+ G K+LEHDSLD
Sbjct: 39 SIYGIAAGYCISASLLSIINKWAIMKFPYPGALTALQYFTSAAGVLVCGWCKVLEHDSLD 98
Query: 1312 FLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLHQPWPSIR 1133
LTMWRFLPAA++FYLSLFTNSELLLHANVDTFIVFRS VPIFVA+GE L+LHQPWPS++
Sbjct: 99 LLTMWRFLPAAIMFYLSLFTNSELLLHANVDTFIVFRSLVPIFVAIGETLFLHQPWPSLK 158
Query: 1132 TWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMTVGLS 971
TWLSLSTIF GSVLYVLTDYQFT+ AYSWALAYL+SMT+DFVYIKHVVMT+GL+
Sbjct: 159 TWLSLSTIFGGSVLYVLTDYQFTVMAYSWALAYLVSMTIDFVYIKHVVMTIGLN 212
>ref|XP_003516327.1| PREDICTED: GDP-mannose transporter GONST3-like [Glycine max]
Length = 382
Score = 315 bits (807), Expect = 2e-83
Identities = 148/175 (84%), Positives = 166/175 (94%)
Frame = -1
Query: 1495 VSVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSL 1316
+SVYG+AAGYC+SASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFG+LK+LEHD L
Sbjct: 45 ISVYGVAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGRLKLLEHDPL 104
Query: 1315 DFLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLHQPWPSI 1136
D +TMW+FLPAA+IFYLSLFTNSELLLHANVDTFIVFRS VP+FVA+GE L+LHQPWPS
Sbjct: 105 DLMTMWQFLPAAIIFYLSLFTNSELLLHANVDTFIVFRSVVPLFVAVGETLFLHQPWPSG 164
Query: 1135 RTWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMTVGLS 971
+TW SL TIFAGSVLYV+TDYQFT AY+WALAYL+SMT+DFVYIKHVVMT+GL+
Sbjct: 165 KTWASLGTIFAGSVLYVVTDYQFTFMAYTWALAYLVSMTIDFVYIKHVVMTIGLN 219
>ref|XP_002514953.1| GDP-mannose transporter, putative [Ricinus communis]
gi|223546004|gb|EEF47507.1| GDP-mannose transporter,
putative [Ricinus communis]
Length = 392
Score = 313 bits (803), Expect = 6e-83
Identities = 149/174 (85%), Positives = 165/174 (94%)
Frame = -1
Query: 1492 SVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLD 1313
S+YGIAAGYC+SASLLSIINKWAVMKFPYPGALTALQYFTSAAGVL G K++EHD LD
Sbjct: 57 SIYGIAAGYCLSASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLACGWFKLVEHDRLD 116
Query: 1312 FLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLHQPWPSIR 1133
LTMWRFLPAA++FYLSLFTNSELLLHANVDTFIVFRS VPIFVA+GE L+LHQPWP+++
Sbjct: 117 LLTMWRFLPAAIMFYLSLFTNSELLLHANVDTFIVFRSVVPIFVAIGETLFLHQPWPALK 176
Query: 1132 TWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMTVGLS 971
TWLSL+TIF GSVLYVLTDYQFT+TAYSWALAYL+SMTVDFVYIKHVVMT+GL+
Sbjct: 177 TWLSLTTIFGGSVLYVLTDYQFTVTAYSWALAYLVSMTVDFVYIKHVVMTIGLN 230
>ref|NP_177760.1| golgi nucleotide sugar transporter 3 [Arabidopsis thaliana]
gi|75198562|sp|Q9S845.1|GONS3_ARATH RecName:
Full=GDP-mannose transporter GONST3; AltName:
Full=Protein GOLGI NUCLEOTIDE SUGAR TRANSPORTER 3
gi|6554485|gb|AAF16667.1|AC012394_16 unknown protein;
69155-70273 [Arabidopsis thaliana]
gi|6573714|gb|AAF17634.1|AC009978_10 T23E18.26
[Arabidopsis thaliana] gi|29329821|emb|CAD83087.1| GONST3
Golgi Nucleotide sugar transporter [Arabidopsis thaliana]
gi|332197705|gb|AEE35826.1| golgi nucleotide sugar
transporter 3 [Arabidopsis thaliana]
Length = 372
Score = 313 bits (801), Expect = 1e-82
Identities = 146/174 (83%), Positives = 166/174 (95%)
Frame = -1
Query: 1492 SVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLD 1313
SVYG+AAGYC+SASLLSIINKWA+MKFPYPGALTA+QYFTSAAGVLL ++K++EHDSL+
Sbjct: 34 SVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVLLCAQMKLIEHDSLN 93
Query: 1312 FLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLHQPWPSIR 1133
LTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE L+LHQPWPS++
Sbjct: 94 LLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLFLHQPWPSVK 153
Query: 1132 TWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMTVGLS 971
TW SL+TIF GS+LYV TDYQFT+ AYSWALAYL+SMT+DFVYIKHVVMT+GL+
Sbjct: 154 TWGSLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGLN 207
>ref|XP_002889076.1| integral membrane family protein [Arabidopsis lyrata subsp. lyrata]
gi|297334917|gb|EFH65335.1| integral membrane family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 372
Score = 313 bits (801), Expect = 1e-82
Identities = 146/174 (83%), Positives = 165/174 (94%)
Frame = -1
Query: 1492 SVYGIAAGYCISASLLSIINKWAVMKFPYPGALTALQYFTSAAGVLLFGKLKILEHDSLD 1313
SVYG+AAGYC+SASLLSIINKWA+MKFPYPGALTA+QYFTSAAGV L ++K++EHDSL+
Sbjct: 34 SVYGVAAGYCLSASLLSIINKWAIMKFPYPGALTAMQYFTSAAGVFLCAQMKLIEHDSLN 93
Query: 1312 FLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAMGEALYLHQPWPSIR 1133
LTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVA+GE LYLHQPWPS++
Sbjct: 94 LLTMWRFLPAAMIFYLSLFTNSELLLHANVDTFIVFRSAVPIFVAIGETLYLHQPWPSVK 153
Query: 1132 TWLSLSTIFAGSVLYVLTDYQFTLTAYSWALAYLISMTVDFVYIKHVVMTVGLS 971
TW SL+TIF GS+LYV TDYQFT+ AYSWALAYL+SMT+DFVYIKHVVMT+GL+
Sbjct: 154 TWGSLATIFGGSLLYVFTDYQFTIAAYSWALAYLVSMTIDFVYIKHVVMTIGLN 207