BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007423
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   342   2e-92
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   335   5e-90
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   324   6e-87
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302...   310   2e-82
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab...   308   5e-82

>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
           gi|297740757|emb|CBI30939.3| unnamed protein product
           [Vitis vinifera]
          Length = 516

 Score =  342 bits (878), Expect = 2e-92
 Identities = 170/200 (85%), Positives = 186/200 (93%)
 Frame = -3

Query: 602 WMRSPVNVSLIEECSLKLLPCLDPRLEEALERMGFSSLFPIQVAAWQETIGSGNFDRDLC 423
           WMRSP++VSL EEC L L PCLDPRLE AL+ MGFSSLFP+QVA WQET+G G F+RDLC
Sbjct: 15  WMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQETVGPGAFERDLC 74

Query: 422 INSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVG 243
           INSPTGSGKTLAYALPIV +LS+R+VKC+RALVVLPTRDLALQVK+VFA+IAPAVGLSVG
Sbjct: 75  INSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEVFAAIAPAVGLSVG 134

Query: 242 LAVGQTCIADEISELIKRPKLEAGVCYDLEEQVVELQSSVDILVATPGRLMDHINTTKGF 63
           LAVGQT IADEISELIKRPKLEAG+CYD E+  +ELQSSVDILVATPGRLMDHINTTKGF
Sbjct: 135 LAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPGRLMDHINTTKGF 194

Query: 62  TLEHLRYLVVDETDRLLREA 3
           TL+HLRYLVVDETDRLLREA
Sbjct: 195 TLKHLRYLVVDETDRLLREA 214


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
           DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
           sativus]
          Length = 517

 Score =  335 bits (858), Expect = 5e-90
 Identities = 166/200 (83%), Positives = 187/200 (93%)
 Frame = -3

Query: 602 WMRSPVNVSLIEECSLKLLPCLDPRLEEALERMGFSSLFPIQVAAWQETIGSGNFDRDLC 423
           WMRSPV+VSLIEEC L++LP LD RL+ AL+ MG SSLFP+Q+A WQE IG G+FDRDLC
Sbjct: 15  WMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQEAIGPGSFDRDLC 74

Query: 422 INSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVG 243
           INSPTGSGKTLAYALPIVQMLS+R+VKC+RALVVLPTRDLALQVK+VF++IAPAVGLSVG
Sbjct: 75  INSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVFSAIAPAVGLSVG 134

Query: 242 LAVGQTCIADEISELIKRPKLEAGVCYDLEEQVVELQSSVDILVATPGRLMDHINTTKGF 63
           LAVGQ+ IADEISELIKRPKLEAG+CYD ++ +VELQSSVDILVATPGRLMDHIN TKGF
Sbjct: 135 LAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPGRLMDHINFTKGF 194

Query: 62  TLEHLRYLVVDETDRLLREA 3
           TL+HLRYLV+DETDRLLREA
Sbjct: 195 TLQHLRYLVIDETDRLLREA 214


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  324 bits (831), Expect = 6e-87
 Identities = 161/200 (80%), Positives = 182/200 (91%)
 Frame = -3

Query: 602 WMRSPVNVSLIEECSLKLLPCLDPRLEEALERMGFSSLFPIQVAAWQETIGSGNFDRDLC 423
           WMRSPV+VS  EE  L +LPCLDPRL+ AL+ MGF +LFP+Q+A WQETIG G F+RDLC
Sbjct: 18  WMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQIAVWQETIGPGAFERDLC 77

Query: 422 INSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVG 243
           INSPTGSGKTLAYALPIVQ+LSTR+VKC+RALVVLPTRDLALQVKQVFA+IAPA+GLSVG
Sbjct: 78  INSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQVKQVFAAIAPAMGLSVG 137

Query: 242 LAVGQTCIADEISELIKRPKLEAGVCYDLEEQVVELQSSVDILVATPGRLMDHINTTKGF 63
           LAVGQ+ IADEISELIK+P+ EAG+CYD ++ + ELQSSVDILVATPGRLMDHI TTKGF
Sbjct: 138 LAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDILVATPGRLMDHITTTKGF 197

Query: 62  TLEHLRYLVVDETDRLLREA 3
           TLEHL YLVVDETDRLLRE+
Sbjct: 198 TLEHLCYLVVDETDRLLRES 217


>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
           gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName:
           Full=DEAD-box ATP-dependent RNA helicase 1
           gi|332658259|gb|AEE83659.1| RNA helicase 1 [Arabidopsis
           thaliana]
          Length = 522

 Score =  310 bits (793), Expect = 2e-82
 Identities = 150/200 (75%), Positives = 177/200 (88%)
 Frame = -3

Query: 602 WMRSPVNVSLIEECSLKLLPCLDPRLEEALERMGFSSLFPIQVAAWQETIGSGNFDRDLC 423
           WMR+PV+VS +E C+L  LPCL+P+L++ALE MG SSLFP+QVA W ETIG G F+RD+C
Sbjct: 17  WMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDIC 76

Query: 422 INSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVG 243
           +NSPTGSGKTL+YALPIVQ+L++R V+C+RALVVLPTRDLALQVK VF +IAPAVGLSVG
Sbjct: 77  VNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVFDAIAPAVGLSVG 136

Query: 242 LAVGQTCIADEISELIKRPKLEAGVCYDLEEQVVELQSSVDILVATPGRLMDHINTTKGF 63
            AVGQ+ IA EIS+LIK PKL+AG+CYD ++    L+S+VDILVATPGRLMDHIN TKGF
Sbjct: 137 SAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPGRLMDHINNTKGF 196

Query: 62  TLEHLRYLVVDETDRLLREA 3
           TLEHLRYLVVDETDRLLREA
Sbjct: 197 TLEHLRYLVVDETDRLLREA 216


>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
           lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
           ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
          Length = 522

 Score =  308 bits (789), Expect = 5e-82
 Identities = 149/200 (74%), Positives = 176/200 (88%)
 Frame = -3

Query: 602 WMRSPVNVSLIEECSLKLLPCLDPRLEEALERMGFSSLFPIQVAAWQETIGSGNFDRDLC 423
           WMR+PV+VS +E C+L+ LPCL+P+L++ALE MG SSLFP+QVA W ETIG G F+RD+C
Sbjct: 17  WMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAVWHETIGPGGFERDIC 76

Query: 422 INSPTGSGKTLAYALPIVQMLSTRSVKCIRALVVLPTRDLALQVKQVFASIAPAVGLSVG 243
           +NSPTGSGKTL+YALPIVQ+L++R V+C+RALVVLPTRDLALQVK VF +IAP VGLSVG
Sbjct: 77  VNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLALQVKDVFDAIAPTVGLSVG 136

Query: 242 LAVGQTCIADEISELIKRPKLEAGVCYDLEEQVVELQSSVDILVATPGRLMDHINTTKGF 63
            AVGQ+ IA EIS+LIK PKL+AG+CYD E+     +S+VDILVATPGRLMDHIN TKGF
Sbjct: 137 SAVGQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVATPGRLMDHINNTKGF 196

Query: 62  TLEHLRYLVVDETDRLLREA 3
           TLEHLRYLVVDETDRLLREA
Sbjct: 197 TLEHLRYLVVDETDRLLREA 216