BLASTX nr result
ID: Coptis23_contig00007422
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007422
(2390 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI22579.3| unnamed protein product [Vitis vinifera] 361 6e-97
ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis v... 358 5e-96
ref|XP_002513614.1| conserved hypothetical protein [Ricinus comm... 335 3e-89
ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago ... 318 4e-84
gb|EEE62727.1| hypothetical protein OsJ_17530 [Oryza sativa Japo... 310 1e-81
>emb|CBI22579.3| unnamed protein product [Vitis vinifera]
Length = 1217
Score = 361 bits (926), Expect = 6e-97
Identities = 231/490 (47%), Positives = 288/490 (58%), Gaps = 3/490 (0%)
Frame = -2
Query: 2248 SDLADLVEMIHVVVRLMENLQARGTLXXXXXXXXXXXXXVLDNINGITDEGFEGHQVDAQ 2069
SDLADLVEMI++VV+LMENLQA GTL
Sbjct: 525 SDLADLVEMIYIVVQLMENLQAHGTLRVRYVFF--------------------------- 557
Query: 2068 DNDCNLSCKQPGDSSPVSKELFEKDVLDNIDGTAEEIPGDHSANPQGDDGNLSCKQSRDL 1889
C L G+S V+ L +K L + + E GDH Q + G +C QS DL
Sbjct: 558 ---CGLILS--GES--VNLRLLKKRTLSDKNENEGE-HGDHGVI-QNEIGVSNCGQSVDL 608
Query: 1888 RMESQEVLENTGSDGKEES-ISAPNDIDELGVNPTDTGVGDEPAQAENENCNYKPDGIAC 1712
M +E LEN+ SDG++E+ I +I LG +G + + D +
Sbjct: 609 NMSQKESLENSISDGRQEAVIQIEPEIPVLGTG----NLGGSLPHMDVQKAKNTTDDLHY 664
Query: 1711 GTGDSSEDDLPASTNEVDFKVSSFVSTFANNTIIQNLCWLLKDYKSNSISTNHYIICMLR 1532
GT DSS D+ A +EVDFKVS+ VS FANN +IQNLCWLLK YKSNS +TNHYIIC+LR
Sbjct: 665 GTDDSSGDEQAAVVDEVDFKVSTLVSAFANNHVIQNLCWLLKFYKSNSTTTNHYIICILR 724
Query: 1531 RICDDLELSPMLYQLSLLTIFYDILAEQKSSNCKEYANIVSFLSNLVRKMMRKMKSQPLL 1352
+ICDDLELSPMLYQLSLLTIFY+IL EQKS CK+Y NIV FL+NLVRKM+RKMKSQPLL
Sbjct: 725 KICDDLELSPMLYQLSLLTIFYNILCEQKSCPCKDYENIVCFLTNLVRKMLRKMKSQPLL 784
Query: 1351 FVEVLFWKTRKECHYINTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADS 1175
FVEVLFWKTR ECHYI + S+++ELG LKKE+G W E+ +E G HRSIAD+
Sbjct: 785 FVEVLFWKTRGECHYITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADA 844
Query: 1174 LGDDEADVTAS-KPTYAASSQTDNEKDPYRAKRRKVARRESTDEMNTDVGNITSDDAHSD 998
LG+DEADV S +P Y + +E A T ++ + T+ D +
Sbjct: 845 LGEDEADVVISHEPVYQKNDDNFSE-----------AEEGVTPISSSKIDGKTNSD--NV 891
Query: 997 RRPAEHASSLELKRKKRLVFDDELETEIKNLYAKYKDQKRWSHIIASSLLDTGKTVTAAQ 818
AEH S KRK+RLV E+E IK+LY K+KD + S +IA + LD V+ Q
Sbjct: 892 GHYAEHESERVSKRKRRLVLSAEVEKNIKDLYEKFKDDRHCSRLIAEA-LDPDCKVSPVQ 950
Query: 817 VYRKIKQLGL 788
V K+KQLGL
Sbjct: 951 VSNKLKQLGL 960
>ref|XP_002266509.1| PREDICTED: protein timeless homolog [Vitis vinifera]
Length = 1269
Score = 358 bits (918), Expect = 5e-96
Identities = 225/493 (45%), Positives = 287/493 (58%), Gaps = 6/493 (1%)
Frame = -2
Query: 2248 SDLADLVEMIHVVVRLMENLQARGTLXXXXXXXXXXXXXVLDNINGITDEGFEGHQVDAQ 2069
SDLADLVEMI++VV+LMENLQA GTL ++ + +G +
Sbjct: 523 SDLADLVEMIYIVVQLMENLQAHGTLR-------------------VSRKSRKGRK---- 559
Query: 2068 DNDCNLSCKQPGDSSPVSKELFEKDVLDNIDGTAEEIPGDHSANPQGDDGNLSCKQSRDL 1889
++ + D + E GDH Q + G +C QS DL
Sbjct: 560 ----------------------KRTLSDKNENEGEH--GDHGVI-QNEIGVSNCGQSVDL 594
Query: 1888 RMESQEVLENTGSDGKEES-ISAPNDIDELGVNPTDTGVGDEPAQAENENCNYKPDGIAC 1712
M +E LEN+ SDG++E+ I +I LG +G + + D +
Sbjct: 595 NMSQKESLENSISDGRQEAVIQIEPEIPVLGTG----NLGGSLPHMDVQKAKNTTDDLHY 650
Query: 1711 GTGDSSEDDLPASTNEVDFKVSSFVSTFANNTIIQNLCWLLKDYKSNSISTNHYIICMLR 1532
GT DSS D+ A +EVDFKVS+ VS FANN +IQNLCWLLK YKSNS +TNHYIIC+LR
Sbjct: 651 GTDDSSGDEQAAVVDEVDFKVSTLVSAFANNHVIQNLCWLLKFYKSNSTTTNHYIICILR 710
Query: 1531 RICDDLELSPMLYQLSLLTIFYDILAEQKSSNCKEYANIVSFLSNLVRKMMRKMKSQPLL 1352
+ICDDLELSPMLYQLSLLTIFY+IL EQKS CK+Y NIV FL+NLVRKM+RKMKSQPLL
Sbjct: 711 KICDDLELSPMLYQLSLLTIFYNILCEQKSCPCKDYENIVCFLTNLVRKMLRKMKSQPLL 770
Query: 1351 FVEVLFWKTRKECHYINTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADS 1175
FVEVLFWKTR ECHYI + S+++ELG LKKE+G W E+ +E G HRSIAD+
Sbjct: 771 FVEVLFWKTRGECHYITSQSLLHELGSLKKESGKWGNISRHGEIGSTEGKGWMHRSIADA 830
Query: 1174 LGDDEADVTAS-KPTYAASSQTDNEKDPYRAKRRKVARRESTDEMNTDVGNITSDDAHSD 998
LG+DEADV S +P Y + +E A T ++ + T+ D +
Sbjct: 831 LGEDEADVVISHEPVYQKNDDNFSE-----------AEEGVTPISSSKIDGKTNSDKYDV 879
Query: 997 RRP---AEHASSLELKRKKRLVFDDELETEIKNLYAKYKDQKRWSHIIASSLLDTGKTVT 827
+ AEH S KRK+RLV E+E IK+LY K+KD + S +IA + LD V+
Sbjct: 880 QHVGHYAEHESERVSKRKRRLVLSAEVEKNIKDLYEKFKDDRHCSRLIAEA-LDPDCKVS 938
Query: 826 AAQVYRKIKQLGL 788
QV K+KQLGL
Sbjct: 939 PVQVSNKLKQLGL 951
Score = 94.7 bits (234), Expect = 1e-16
Identities = 88/311 (28%), Positives = 147/311 (47%), Gaps = 10/311 (3%)
Frame = -2
Query: 1060 ESTDEMNTDVGNITSDDAH----SDRRPAEHASSLELKRKKRLVFDDELETEIKNLYAKY 893
+ST+++ + + + AH ++ + SL +++ R D+ ET I+ LY ++
Sbjct: 968 DSTNQLMEEARAVGEESAHLVCSNNSEGSLVRKSLHTRKRVRAFSKDQEET-IRALYEQF 1026
Query: 892 KDQKRWSHIIASSLLDTGKTVTAAQVYRKIKQLGLSGPQRLRPNDSKKHSRDMDINXXXX 713
K KR +++IAS+L +TAAQV RK+KQLGL P+R R + H RD D+N
Sbjct: 1027 KGHKRCTYMIASALAGDD-ILTAAQVSRKLKQLGLHVPRRKRA-EGNMHLRDEDLNDFDT 1084
Query: 712 XXXXXXXXXXXK---RRKNKGSSNIVFEEATSVHSNEKIKNTIGGXXXXXXXXXXXLMKS 542
+R K + ++ EE + K+ + ++K
Sbjct: 1085 AKAQDSDDETLLSLRKRSKKENHRLLREEVPEQNIEGKLMQS------SDDETLSSVLKK 1138
Query: 541 GKKPFSRAHVEKVTTSSVEEPLTGNDSAVGVFEDAIERDRYIHSNE--TGSLHDDANINH 368
++ + ++ +TS+ + +V V +D +RD + S+E + DD H
Sbjct: 1139 TRRLPPKLDEKRTSTSNGRLGIDDPSGSV-VAKDVTKRDGHTLSDELEVAGIEDDVAFKH 1197
Query: 367 ADLDDNALLNQIPGIKGRRQVGVESRNNVDNREHQEMYNKLADEFEDSGDD-AEPVAPKC 191
LDDN+ ++I +Q+G S NN D HQ++ ++LA DSGDD A P
Sbjct: 1198 VSLDDNSE-DEIMAFSSEKQLGAASANNRDISPHQQVADELA----DSGDDIASSALPIN 1252
Query: 190 SIVRRKLKMVI 158
S RRKL+MVI
Sbjct: 1253 STSRRKLRMVI 1263
>ref|XP_002513614.1| conserved hypothetical protein [Ricinus communis]
gi|223547522|gb|EEF49017.1| conserved hypothetical
protein [Ricinus communis]
Length = 1047
Score = 335 bits (860), Expect = 3e-89
Identities = 221/553 (39%), Positives = 302/553 (54%), Gaps = 45/553 (8%)
Frame = -2
Query: 2248 SDLADLVEMIHVVVRLMENLQARGTLXXXXXXXXXXXXXVLDNINGITDEGFEGHQVDAQ 2069
SDLADLVEMIH++VRLMENLQARG L L + G T+ G Q
Sbjct: 477 SDLADLVEMIHLIVRLMENLQARGALRVSKKSRKVRKKKALGSKRG-TENELSGDGTKIQ 535
Query: 2068 DNDCNLSCKQPGDSSPVSKELFEKDVLDNIDGTAEEIPGDHSANPQGDDGNLSCKQSRDL 1889
D + + +Q D S + K I ++S + ++ N++ + ++D
Sbjct: 536 DQTLSSNTEQSIDLSILQK-----------------INEENSTSDNQENNNIAVQDNQD- 577
Query: 1888 RMESQEVLENTGSDGKEESISAPNDIDELGVNPTDTG-VGDEPAQAENENCNYKPDGIAC 1712
N +E+I+ D+ ++ D G G + ++ D +
Sbjct: 578 ---------NVAVQDSQENINNAIQPDKTEISAQDIGNFGRNLPPMDKRKIDHIDDDLTG 628
Query: 1711 GTGDSSEDDLPASTNEVDFKVSSFVSTFANNTIIQNLCWLLKDYKSNSISTNHYIICMLR 1532
+ DSS D+ T+EVDFKVSSFVSTFAN+ II+NLCWLL+ YKSNS +TNHYI+CML+
Sbjct: 629 SSDDSSSDEDLIETHEVDFKVSSFVSTFANHNIIRNLCWLLRFYKSNSTNTNHYIVCMLQ 688
Query: 1531 RICDDLELSPMLYQLSLLTIFYDILAEQKSSNCKEYANIVSFLSNLVRKMMRKMKSQPLL 1352
RI DDL+LSPMLYQLSLLT FYDIL EQKS CKEYA+IV FL+ L+R+M+RKMKSQPLL
Sbjct: 689 RITDDLDLSPMLYQLSLLTTFYDILDEQKSCPCKEYASIVDFLTTLIRRMLRKMKSQPLL 748
Query: 1351 FVEVLFWKTRKECHYINTDSIMNELGKLKKETGNW-ETGDDVEMVPSEDIGRKHRSIADS 1175
FVEVLFWK+RKECHYIN + +++ELG +KKE +W D E+ S+ G RSIAD+
Sbjct: 749 FVEVLFWKSRKECHYINAEYLLHELGHMKKEAKSWGNVLADGELGSSQAKGWVPRSIADA 808
Query: 1174 LGDDEADVTASKPTYAASSQTDNEKDPYRAKRRKVARRESTDEMNTDVGNITSDDAHSDR 995
LG+DEADV + Y +KRR++ + + ++ DD R
Sbjct: 809 LGEDEADVVIAHEPYQNGGNAMEPATEGVSKRRRLVLTDEMEMRIKELHEKYKDDGSCVR 868
Query: 994 ------RPAEHAS-----------SLELKRKKRL--------VFDDEL------------ 926
PA H S L++ KKRL F D+L
Sbjct: 869 LIAESLDPAGHVSPAQVFNKLKQLGLKVSSKKRLRNVDKEFSTFPDQLVENGRNTRKKVR 928
Query: 925 ------ETEIKNLYAKYKDQKRWSHIIASSLLDTGKTVTAAQVYRKIKQLGLSGPQRLRP 764
E I+ L+ ++K+ KR S++IA++L + TAAQV RK+KQLGL P R R
Sbjct: 929 AFSKDQEEIIRALFEQFKEHKRCSYMIANALA-ADNSFTAAQVSRKLKQLGLHIP-RQRR 986
Query: 763 NDSKKHSRDMDIN 725
+++K H RD ++N
Sbjct: 987 SETKLHLRDKELN 999
>ref|XP_003592159.1| Topoisomerase 1-associated factor [Medicago truncatula]
gi|355481207|gb|AES62410.1| Topoisomerase 1-associated
factor [Medicago truncatula]
Length = 1335
Score = 318 bits (815), Expect = 4e-84
Identities = 213/516 (41%), Positives = 290/516 (56%), Gaps = 18/516 (3%)
Frame = -2
Query: 2248 SDLADLVEMIHVVVRLMENLQARGTLXXXXXXXXXXXXXVLDNINGITDEGFEGHQVDAQ 2069
S LADLVE+I VV+LM++LQ+RGTL + E
Sbjct: 522 SALADLVEIICKVVKLMDHLQSRGTLRVSKKAR---------KLKKKISSARESENKPTG 572
Query: 2068 DNDC-NLSCKQPGDSSPVSKELFEKDVLDNIDGT-AEEIPGDHSANPQGDDGNLSCKQSR 1895
D C D+ +L +K+ + N + T E+ P D+ D N Q R
Sbjct: 573 DQSCIQKEASISIDNQLAENQLLQKESIPNANSTEQEDTPHDNEHQNLEKDVN---SQVR 629
Query: 1894 DLRMESQEVLENTGSDGKE--------ESISAPN-------DIDELGVNPTDTGVGDEPA 1760
ME++ + +N ++ K ES+ N D++E ++ VG +P
Sbjct: 630 LKPMENRNLDDNGDNNVKRDVNFEIGVESVRNTNLDDNKNEDVEE----DVNSQVGMKP- 684
Query: 1759 QAENENCNYKPDGIACGTGDSSEDDLPASTNEVDFKVSSFVSTFANNTIIQNLCWLLKDY 1580
EN N + + + TGD SED+ + +EVDF VS+ VS FAN++IIQ LCWLLK Y
Sbjct: 685 -MENTNPEHPNEDMLDDTGDFSEDEQINAVSEVDFNVSTLVSAFANHSIIQKLCWLLKFY 743
Query: 1579 KSNSISTNHYIICMLRRICDDLELSPMLYQLSLLTIFYDILAEQKSSNCKEYANIVSFLS 1400
KSNS++ NHYII MLRRI DDLEL PMLYQLSLLTIFYDILAEQKS C+EYA+IV FL+
Sbjct: 744 KSNSLAINHYIISMLRRISDDLELHPMLYQLSLLTIFYDILAEQKSRPCEEYASIVDFLN 803
Query: 1399 NLVRKMMRKMKSQPLLFVEVLFWKTRKECHYINTDSIMNELGKLKKETGNW-ETGDDVEM 1223
+LVRKM++KMK QPLLFVEVLFWKTR+ECHYIN + +++ELG LK ET NW +T D E+
Sbjct: 804 SLVRKMLKKMKKQPLLFVEVLFWKTRRECHYINAEYLLDELGHLKNETKNWNDTQGDGEI 863
Query: 1222 VPSEDIGRKHRSIADSLGDDEADVTASKPTYAASSQTDNEKDPYRAKRRKVARRESTDEM 1043
S RS+AD+LGDDEADV S + + Q + EK + + +
Sbjct: 864 GSSPGKPWTRRSLADALGDDEADVVIS---HDSRYQNNGEK------------LDDIEGI 908
Query: 1042 NTDVGNITSDDAHSDRRPAEHASSLELKRKKRLVFDDELETEIKNLYAKYKDQKRWSHII 863
+ G+ D ++ E +RKK+L+ D ELE +IK+LY K+KD + S I
Sbjct: 909 ASTSGSKNDRDDNNGEPWLEDEYQTAPRRKKKLILDAELEIQIKDLYEKFKDDRNCSRRI 968
Query: 862 ASSLLDTGKTVTAAQVYRKIKQLGLSGPQRLRPNDS 755
A L GK ++ AQ+ K+K+LGL+ R + D+
Sbjct: 969 AEVLDPDGK-ISTAQISSKLKKLGLTIASRKKKGDA 1003
>gb|EEE62727.1| hypothetical protein OsJ_17530 [Oryza sativa Japonica Group]
Length = 1140
Score = 310 bits (793), Expect = 1e-81
Identities = 200/510 (39%), Positives = 278/510 (54%), Gaps = 16/510 (3%)
Frame = -2
Query: 2248 SDLADLVEMIHVVVRLMENLQARGTLXXXXXXXXXXXXXVLDNINGITDEGFEGHQVDAQ 2069
SDLADL+ IH++++LME LQARG L + +G + A
Sbjct: 483 SDLADLLGTIHIMLQLMEKLQARGALR-------------------VAKRTRKGRKKKAS 523
Query: 2068 DNDCNLSCKQPGDSSPVSKELFEKDVLDNIDGTA---EEIPG----DHSANPQGDDGNLS 1910
N +++ ++ E E+ +D+ DGT E +P D A P
Sbjct: 524 KNKI--------ENTNLNAEKMEQSNVDSTDGTKSALESLPDLKNVDSVAEPP------- 568
Query: 1909 CKQSRDLRMESQEVLENTGSDGKEESISAPNDIDELGVNPTDTGVGD-EPAQAENENCNY 1733
+ QE + + G D AP+++ VN T + EP++A+N
Sbjct: 569 --------LTEQEKVVSNGMD-------APDELAGTSVNLDSTSHCEGEPSRADNGELKG 613
Query: 1732 KPDGIACGTGDSSEDDLPASTNEVDFKVSSFVSTFANNTIIQNLCWLLKDYKSNSISTNH 1553
GT DSS DD P +T+EVDF VS +ST ANN+++QN+CWLLK YKSNS TNH
Sbjct: 614 NLIDEEDGTSDSSLDDQPPATSEVDFNVSRLISTLANNSVVQNICWLLKHYKSNSFRTNH 673
Query: 1552 YIICMLRRICDDLELSPMLYQLSLLTIFYDILAEQKSSNCKEYANIVSFLSNLVRKMMRK 1373
YIICMLRR C+DLEL+PMLYQLSLLT FYDILA++KSSN KEY NIV+FLS +VRKM+R
Sbjct: 674 YIICMLRRFCEDLELAPMLYQLSLLTTFYDILADEKSSNSKEYTNIVNFLSKIVRKMLRV 733
Query: 1372 MKSQPLLFVEVLFWKTRKECHYINTDSIMNELGKLKKETGNWETGDDVEMVPSEDIGRKH 1193
MK QPLLFV+VLFWKTRKECH I+ D++++++ K G + S R
Sbjct: 734 MKKQPLLFVDVLFWKTRKECHCIDADALLSDITKDATNKGG--------EIGSSKGWRGS 785
Query: 1192 RSIADSLGDDEADVTASKPTYAASSQTDNEKDPYR--AKRRKVARRESTDEMNTDVGNIT 1019
+IADSLGDDE D+ Y A D+ + +KR A +S ++
Sbjct: 786 INIADSLGDDEVDLVIPHEPYNADKDDDSSSGEHEDVSKRSMGATNKSNRILSFSDSEAD 845
Query: 1018 SDDA----HSDRRPAEHAS--SLELKRKKRLVFDDELETEIKNLYAKYKDQKRWSHIIAS 857
+D+ +R S S KR+ R +F +E E +++LY KYKD ++ +H+IA
Sbjct: 846 DNDSSIQIEKNRNTVSRGSQNSEAPKRRGRSIFSEEQEKLMRDLYEKYKDDRKCTHLIAE 905
Query: 856 SLLDTGKTVTAAQVYRKIKQLGLSGPQRLR 767
+L +GK +++ QVYRK+ QLGL + R
Sbjct: 906 ALDPSGK-ISSVQVYRKLTQLGLRNAMKRR 934