BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007403
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]   348   8e-94
ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|2235510...   310   4e-82
gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK3484...   306   4e-81
ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|2...   304   2e-80
ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 ...   303   3e-80

>emb|CAN79067.1| hypothetical protein VITISV_043720 [Vitis vinifera]
          Length = 232

 Score =  348 bits (894), Expect = 8e-94
 Identities = 173/231 (74%), Positives = 188/231 (81%), Gaps = 12/231 (5%)
 Frame = -3

Query: 929 MGSGFEESMSKAPQSPSCSG-----SDAASFECNICFELAQDPIVTLCGHLFCWPCLYKW 765
           M SGF ES S+ PQSPS S      SDA +FECNICF+LAQDPIVTLCGHLFCWPCLYKW
Sbjct: 1   MTSGFGESTSRPPQSPSFSSNNGSNSDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKW 60

Query: 764 LHIHSHSQECPVCKAVIQEEKLVPLYGRGKTRTDPRSKSIPGVNIPNRPSGQRPETAPPP 585
           LHIHSHSQECPVCKA+++EEKLVPLYGRGKT TDPRSKSIPG+NIPNRP+GQRPETAPPP
Sbjct: 61  LHIHSHSQECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGINIPNRPTGQRPETAPPP 120

Query: 584 DQNXXXXXXXXXXXGL---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGA 417
           D N           GL   APMATAR GNFTLSAAFGGLFPS+FNLQVHGFPD TMYG A
Sbjct: 121 DANHFMQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLFPSLFNLQVHGFPDATMYGPA 180

Query: 416 AGYPYGFTNSFHGAHAPFFPQ-PANQGQQTDY--KMLFLMVGIIFIIAMCY 273
           AG+PYGF+NSFHG HA  FPQ P  QGQQ DY  KMLFLM+G+  IIA+ +
Sbjct: 181 AGFPYGFSNSFHGGHAHGFPQHPPTQGQQADYYLKMLFLMIGVFVIIALIW 231


>ref|XP_002510337.1| rnf5, putative [Ricinus communis] gi|223551038|gb|EEF52524.1| rnf5,
           putative [Ricinus communis]
          Length = 229

 Score =  310 bits (793), Expect = 4e-82
 Identities = 154/226 (68%), Positives = 173/226 (76%), Gaps = 9/226 (3%)
 Frame = -3

Query: 923 SGFEESMSKAPQSPSCSGS----DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLHI 756
           SGF ES S+ PQSP  S +    DA +FECNICF+LAQDPIVTLCGHLFCWPCLYKWLH 
Sbjct: 4   SGFGES-SRPPQSPQFSSNYSNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHF 62

Query: 755 HSHSQECPVCKAVIQEEKLVPLYGRGKTRTDPRSKSIPGVNIPNRPSGQRPETAPPPDQN 576
           HS S+ECPVCKA+++EEKLVPLYGRGKT TDPRSKSIPGVNIPNRP+GQRPETAPPP+ N
Sbjct: 63  HSQSKECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPEPN 122

Query: 575 XXXXXXXXXXXGL---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAGY 408
                      GL   APMATAR GNFTLSAAFGGL PS+FNLQVHGFPD  MYG A G+
Sbjct: 123 HFAQHGFGFMGGLGGFAPMATARFGNFTLSAAFGGLIPSLFNLQVHGFPDAAMYGTATGF 182

Query: 407 PYGFTNSFHGAHAPFFPQPANQGQQTDY-KMLFLMVGIIFIIAMCY 273
           PYGF+NSFHG HA  + Q   QGQQ  Y K L   +G   ++A+ +
Sbjct: 183 PYGFSNSFHGGHAHGYHQHQGQGQQDYYLKRLLFFIGFCVLLALIW 228


>gb|AFK34238.1| unknown [Lotus japonicus] gi|388493550|gb|AFK34841.1| unknown
           [Lotus japonicus]
          Length = 228

 Score =  306 bits (784), Expect = 4e-81
 Identities = 147/227 (64%), Positives = 174/227 (76%), Gaps = 7/227 (3%)
 Frame = -3

Query: 929 MGSGFEESMSKAPQSPSCSG---SDAASFECNICFELAQDPIVTLCGHLFCWPCLYKWLH 759
           M SGF ES S++P SPS +G   SDA +FECNICF+LAQDPI+TLCGHLFCWPCLYKWLH
Sbjct: 1   MASGFGESTSRSPPSPSYAGNNNSDAGNFECNICFDLAQDPIITLCGHLFCWPCLYKWLH 60

Query: 758 IHSHSQECPVCKAVIQEEKLVPLYGRGKTRTDPRSKSIPGVNIPNRPSGQRPETAPPPDQ 579
            HS S+ECPVCKA+++EEKLVPLYGRGKT +DPRS+SIPGVNIP+RP+GQRPETAPPP+ 
Sbjct: 61  FHSQSRECPVCKALVEEEKLVPLYGRGKTSSDPRSRSIPGVNIPHRPAGQRPETAPPPEP 120

Query: 578 NXXXXXXXXXXXGL---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGGAAG 411
           N           GL   AP ATAR GNFTLSAAFGG  PS+FN Q+HGF   TMYGGA G
Sbjct: 121 NPFAHHGFGFTGGLGGFAPAATARFGNFTLSAAFGGFIPSLFNFQLHGFHGATMYGGAPG 180

Query: 410 YPYGFTNSFHGAHAPFFPQPANQGQQTDYKMLFLMVGIIFIIAMCYL 270
           +PYGF+NSFHG H   +P    QGQQ DY +  L+  +IF + + ++
Sbjct: 181 FPYGFSNSFHGGHVHRYPLHTGQGQQ-DYYLKRLLFFVIFCVVLAFI 226


>ref|XP_002302470.1| predicted protein [Populus trichocarpa] gi|222844196|gb|EEE81743.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score =  304 bits (779), Expect = 2e-80
 Identities = 151/227 (66%), Positives = 170/227 (74%), Gaps = 8/227 (3%)
 Frame = -3

Query: 929 MGSGFEESMSKAPQSPSCSGS----DAASFECNICFELAQDPIVTLCGHLFCWPCLYKWL 762
           M SGF ES S+AP + S + +    DA +FECNICF+LAQDPIVTLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTSRAPHNSSFTSNNGNGDAGNFECNICFDLAQDPIVTLCGHLFCWPCLYKWL 60

Query: 761 HIHSHSQECPVCKAVIQEEKLVPLYGRGKTRTDPRSKSIPGVNIPNRPSGQRPETAPPPD 582
           H HS S+ECPVCKA+++EEKLVPLYGRGKT TDPRSKSIPGVNIPNRP+GQRPETAPPP+
Sbjct: 61  HFHSKSRECPVCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAGQRPETAPPPE 120

Query: 581 QNXXXXXXXXXXXGL---APMATARIGNFTLSAAFGGLFPSIFNLQVHGFPDTMYGGAAG 411
            N           GL   APMATAR+GNFT SAAFGGL PS+FNLQVHGFPD    G AG
Sbjct: 121 PNHFGQHGFGFMGGLGGFAPMATARLGNFTFSAAFGGLIPSLFNLQVHGFPDAAMYGPAG 180

Query: 410 YPYGFTNSFHGAHAPFFPQPANQGQQTDY-KMLFLMVGIIFIIAMCY 273
           YPYGF NSFHG H   + Q   QGQQ  Y K L L +G    +A+ +
Sbjct: 181 YPYGF-NSFHGGHPHGYRQHHGQGQQDYYLKRLLLFIGFCVFLALIW 226


>ref|XP_003528193.1| PREDICTED: E3 ubiquitin-protein ligase RMA1 isoform 1 [Glycine max]
           gi|356519064|ref|XP_003528194.1| PREDICTED: E3
           ubiquitin-protein ligase RMA1 isoform 2 [Glycine max]
          Length = 231

 Score =  303 bits (777), Expect = 3e-80
 Identities = 145/230 (63%), Positives = 173/230 (75%), Gaps = 10/230 (4%)
 Frame = -3

Query: 929 MGSGFEESMSKAPQSPSC----SGSDAASFECNICFELAQDPIVTLCGHLFCWPCLYKWL 762
           M SGF ES  ++P SPS     + SDAA+FECNICFELAQDPI+TLCGHLFCWPCLYKWL
Sbjct: 1   MASGFGESTGRSPPSPSYFNNNNNSDAANFECNICFELAQDPIITLCGHLFCWPCLYKWL 60

Query: 761 HIHSHSQECPVCKAVIQEEKLVPLYGRGKTRTDPRSKSIPGVNIPNRPSGQRPETAPPPD 582
           H HS S+ECPVCKA+++EEKLVPLYGRGK+ TDPRSKSIPGVNIP+RP+GQRPETAPPP+
Sbjct: 61  HFHSQSRECPVCKALVEEEKLVPLYGRGKSSTDPRSKSIPGVNIPHRPAGQRPETAPPPE 120

Query: 581 QNXXXXXXXXXXXGLA-----PMATARIGNFTLSAAFGGLFPSIFNLQVHGFPD-TMYGG 420
            N           GL      PMAT R GNF LSAAFGG  PS+FN Q+HGF D  MYGG
Sbjct: 121 TNHFHQHGFGFMGGLGGFVPPPMATTRFGNFALSAAFGGFIPSLFNFQMHGFHDAAMYGG 180

Query: 419 AAGYPYGFTNSFHGAHAPFFPQPANQGQQTDYKMLFLMVGIIFIIAMCYL 270
            AG+P+GF N+FHG HA  FP   +QGQQ DY +  L++ ++F + + ++
Sbjct: 181 GAGFPHGFANTFHGVHAHGFPLRTHQGQQ-DYYLKKLLLFVVFCVVLAFI 229