BLASTX nr result

ID: Coptis23_contig00007395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007395
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254...   171   2e-40
ref|XP_002528756.1| conserved hypothetical protein [Ricinus comm...   152   7e-35
ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|2...   141   1e-31
emb|CAN62766.1| hypothetical protein VITISV_021816 [Vitis vinifera]   140   2e-31
ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|2...   139   6e-31

>ref|XP_002282533.1| PREDICTED: uncharacterized protein LOC100254636 [Vitis vinifera]
          Length = 160

 Score =  171 bits (432), Expect = 2e-40
 Identities = 91/159 (57%), Positives = 112/159 (70%), Gaps = 6/159 (3%)
 Frame = +2

Query: 56  MGNCLVLQDKFVKIMKTDGKILEYQTPLRVQQVLSEFTGHAISDSLPVQRHLCADTDMLS 235
           MGNCL  Q+K +KIM+ DGK+LEY+TPL+VQQVLSEF+G AISD+LPV +HL  D +M+ 
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 236 GXXXXXXXXXXXTKEADKSMMTVSSTKEETKQGTGVVRIKIVITKQELKEMLAKGGIPSV 415
           G           + E +K  +  S  + E  QGTGVVRI++VITKQELKEML KGG+ SV
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVEADQGTGVVRIRLVITKQELKEMLRKGGV-SV 119

Query: 416 DDMVSQLQNKT------KDEVDGDRNCNGWKPVLQSIPE 514
           D MVSQLQ         K +VDG+ NC GWKPVL+SIPE
Sbjct: 120 DHMVSQLQRGQGRNGVHKLDVDGNGNCRGWKPVLESIPE 158


>ref|XP_002528756.1| conserved hypothetical protein [Ricinus communis]
           gi|223531850|gb|EEF33668.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 157

 Score =  152 bits (384), Expect = 7e-35
 Identities = 86/157 (54%), Positives = 107/157 (68%), Gaps = 4/157 (2%)
 Frame = +2

Query: 56  MGNCLVLQDKFVKIMKTDGKILEYQTPLRVQQVLSEFTGHAISDSLPVQRHLCADTDMLS 235
           MGNC+VLQ+K VK+MK DGKILEY+ P+RVQQVLSEF+GHAISDSL   +HL  DT +  
Sbjct: 1   MGNCIVLQEKVVKVMKPDGKILEYRAPVRVQQVLSEFSGHAISDSLQDFQHLLPDTKLHG 60

Query: 236 GXXXXXXXXXXXTKEADKSMMTVSSTKEETKQGTGVVRIKIVITKQELKEMLAKGGIPSV 415
           G           + E  K  +  S  +EE K+ TG VRIK+VI+KQEL+E+L KGG+ SV
Sbjct: 61  GSLYYLVALPLPSPEV-KKKVRFSIPEEENKKETGAVRIKLVISKQELQEILRKGGV-SV 118

Query: 416 DDMVSQLQNKTK----DEVDGDRNCNGWKPVLQSIPE 514
           D M+SQLQ + +    D  D D    GWKPVL+SIPE
Sbjct: 119 DYMISQLQGQQRVHRVDTSDNDDCHKGWKPVLESIPE 155


>ref|XP_002308476.1| predicted protein [Populus trichocarpa] gi|222854452|gb|EEE91999.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  141 bits (356), Expect = 1e-31
 Identities = 83/162 (51%), Positives = 105/162 (64%), Gaps = 9/162 (5%)
 Frame = +2

Query: 56  MGNCLVLQDKFVKIMKTDGKILEYQTPLRVQQVLSEFTGHAISDSLPVQRHLCADTDMLS 235
           MGNCLVLQ   +K+MK DGKILEYQ P++VQQVLS+F+GHAI+DSL   +HL  DT +L 
Sbjct: 1   MGNCLVLQANVIKVMKPDGKILEYQAPIKVQQVLSDFSGHAIADSLQAFQHLPPDTSLLG 60

Query: 236 G-XXXXXXXXXXXTKEADKSMMTVSSTKEETK----QGTGVVRIKIVITKQELKEMLAKG 400
           G            + +A K  +  S  +EE K    + + VVRIK+VI+KQEL+EML KG
Sbjct: 61  GDHLYYLVPLQLPSPQAKKKKVRFSIPEEEAKDVQEKTSTVVRIKLVISKQELQEMLRKG 120

Query: 401 GIPSVDDMVSQLQNKTK----DEVDGDRNCNGWKPVLQSIPE 514
           G+ SVDDMVS LQ + +    D    D    GWKP L+SIPE
Sbjct: 121 GV-SVDDMVSHLQGQQRVQKVDISGSDSEHKGWKPELESIPE 161


>emb|CAN62766.1| hypothetical protein VITISV_021816 [Vitis vinifera]
          Length = 193

 Score =  140 bits (354), Expect = 2e-31
 Identities = 74/128 (57%), Positives = 92/128 (71%)
 Frame = +2

Query: 56  MGNCLVLQDKFVKIMKTDGKILEYQTPLRVQQVLSEFTGHAISDSLPVQRHLCADTDMLS 235
           MGNCL  Q+K +KIM+ DGK+LEY+TPL+VQQVLSEF+G AISD+LPV +HL  D +M+ 
Sbjct: 1   MGNCLAQQEKIIKIMRPDGKVLEYKTPLKVQQVLSEFSGCAISDTLPVIQHLRKDMEMVG 60

Query: 236 GXXXXXXXXXXXTKEADKSMMTVSSTKEETKQGTGVVRIKIVITKQELKEMLAKGGIPSV 415
           G           + E +K  +  S  + E   GTGVVRI++VITKQELKEML KGG+ SV
Sbjct: 61  GQLYYLIPVPLPSPEVEKKALRFSDPQVEADXGTGVVRIRLVITKQELKEMLRKGGV-SV 119

Query: 416 DDMVSQLQ 439
           D MVSQLQ
Sbjct: 120 DHMVSQLQ 127


>ref|XP_002323428.1| predicted protein [Populus trichocarpa] gi|222868058|gb|EEF05189.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  139 bits (350), Expect = 6e-31
 Identities = 81/157 (51%), Positives = 102/157 (64%), Gaps = 4/157 (2%)
 Frame = +2

Query: 56  MGNCLVLQDKFVKIMKTDGKILEYQTPLRVQQVLSEFTGHAISDSLPVQRHLCADTDMLS 235
           MGNCLVLQ   +KIMK+DGKILEYQ P++VQQVLS+F  HAI+DSL   ++L  DT++L 
Sbjct: 1   MGNCLVLQGNVIKIMKSDGKILEYQAPIKVQQVLSDFCDHAIADSLQAFQYLSPDTNLLG 60

Query: 236 GXXXXXXXXXXXTKEADKSMMTVSSTKEETK---QGTGVVRIKIVITKQELKEMLAKGGI 406
           G           +    K +       +E K   + T VVRIK+VI+KQEL EML KGG+
Sbjct: 61  GHLYYLVPLQLPSPAKKKKVRFSIPEDQEVKDVQEKTSVVRIKLVISKQELVEMLRKGGV 120

Query: 407 PSVDDMVSQLQNKTK-DEVDGDRNCNGWKPVLQSIPE 514
            SVDDMVSQL  + +  +VD     N WKPVL+SIPE
Sbjct: 121 -SVDDMVSQLHGQQRVQKVDIPDVVNTWKPVLESIPE 156


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