BLASTX nr result

ID: Coptis23_contig00007378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007378
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317688.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24
gb|AFK38498.1| unknown [Lotus japonicus]                              111   5e-23
gb|ACN36530.1| unknown [Zea mays] gi|413916664|gb|AFW56596.1| hy...   110   2e-22
emb|CBI23601.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...   107   1e-21

>ref|XP_002317688.1| predicted protein [Populus trichocarpa] gi|222860753|gb|EEE98300.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  114 bits (285), Expect = 8e-24
 Identities = 50/74 (67%), Positives = 62/74 (83%)
 Frame = -1

Query: 223 GFFQLVNHGIDVRVLDEMIGSVGKFYEQPKEVKSKYYTRDFSLKVRYNSNFDLYQSPAAN 44
           GFFQ+VNHGI V VL+EMIG V +F+EQ  EVK ++Y+RD++ KV YNSNFDLYQ+PAAN
Sbjct: 93  GFFQVVNHGIPVSVLEEMIGGVARFHEQDSEVKKEWYSRDYTRKVLYNSNFDLYQAPAAN 152

Query: 43  WRDSMSCTMAPEPP 2
           WRD++SC MAP  P
Sbjct: 153 WRDTLSCVMAPRQP 166


>gb|AFK38498.1| unknown [Lotus japonicus]
          Length = 374

 Score =  111 bits (278), Expect = 5e-23
 Identities = 50/77 (64%), Positives = 61/77 (79%)
 Frame = -1

Query: 232 ETGGFFQLVNHGIDVRVLDEMIGSVGKFYEQPKEVKSKYYTRDFSLKVRYNSNFDLYQSP 53
           ET GFFQ+VNHGI   +L EMI  V +F+EQP +VK +++ RDFS K+R+NSNFDLYQS 
Sbjct: 97  ETCGFFQVVNHGIPKEILHEMIEGVCRFHEQPLDVKKEFFNRDFSKKMRFNSNFDLYQSK 156

Query: 52  AANWRDSMSCTMAPEPP 2
            ANWRDS  CTMAP+PP
Sbjct: 157 VANWRDSFFCTMAPDPP 173


>gb|ACN36530.1| unknown [Zea mays] gi|413916664|gb|AFW56596.1| hypothetical protein
           ZEAMMB73_065958 [Zea mays]
          Length = 383

 Score =  110 bits (274), Expect = 2e-22
 Identities = 51/77 (66%), Positives = 60/77 (77%)
 Frame = -1

Query: 232 ETGGFFQLVNHGIDVRVLDEMIGSVGKFYEQPKEVKSKYYTRDFSLKVRYNSNFDLYQSP 53
           ET GFFQLVNHG+   +L EM+ SV +F E+P EVK  YYTRD   KVR+NSNFDL+QSP
Sbjct: 96  ETVGFFQLVNHGVPSELLCEMLPSVRRFNEEPHEVKRPYYTRDARRKVRFNSNFDLFQSP 155

Query: 52  AANWRDSMSCTMAPEPP 2
           AANWRD++ C  APEPP
Sbjct: 156 AANWRDTLFCEAAPEPP 172


>emb|CBI23601.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/77 (61%), Positives = 59/77 (76%)
 Frame = -1

Query: 232 ETGGFFQLVNHGIDVRVLDEMIGSVGKFYEQPKEVKSKYYTRDFSLKVRYNSNFDLYQSP 53
           E  GFFQ+VNHGI   VL++MI  + +F+EQ  E K +YY+RDF  KVR+NSNFDLYQ+ 
Sbjct: 69  EKWGFFQVVNHGIPESVLNDMIDGIRRFHEQDAETKKEYYSRDFQKKVRFNSNFDLYQAR 128

Query: 52  AANWRDSMSCTMAPEPP 2
            ANWRDS++C MAP PP
Sbjct: 129 MANWRDSLACVMAPNPP 145


>ref|XP_002284663.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like
           [Vitis vinifera]
          Length = 373

 Score =  107 bits (266), Expect = 1e-21
 Identities = 47/77 (61%), Positives = 59/77 (76%)
 Frame = -1

Query: 232 ETGGFFQLVNHGIDVRVLDEMIGSVGKFYEQPKEVKSKYYTRDFSLKVRYNSNFDLYQSP 53
           E  GFFQ+VNHGI   VL++MI  + +F+EQ  E K +YY+RDF  KVR+NSNFDLYQ+ 
Sbjct: 96  EKWGFFQVVNHGIPESVLNDMIDGIRRFHEQDAETKKEYYSRDFQKKVRFNSNFDLYQAR 155

Query: 52  AANWRDSMSCTMAPEPP 2
            ANWRDS++C MAP PP
Sbjct: 156 MANWRDSLACVMAPNPP 172


Top