BLASTX nr result

ID: Coptis23_contig00007370 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007370
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|2...   274   1e-71
ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricin...   269   6e-70
ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like ...   265   1e-68
emb|CBI29875.3| unnamed protein product [Vitis vinifera]              265   1e-68
emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]   265   1e-68

>ref|XP_002308965.1| predicted protein [Populus trichocarpa] gi|222854941|gb|EEE92488.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  274 bits (701), Expect = 1e-71
 Identities = 136/151 (90%), Positives = 146/151 (96%)
 Frame = +3

Query: 3   CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIITPYAAQVVLLRIIRSKDD 182
           CDMEEKKDEEDSTMNEGEA+VA+AHA+RL+QSGVQ+SDIGIITPYAAQVVLLRI+++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAVAHAKRLVQSGVQASDIGIITPYAAQVVLLRILKNNDD 556

Query: 183 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 362
           KLKD+EISTVDGFQGREKEAIIISMVRSNSKKEVGFL D RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDHRRMNVAVTRARRQCCLVCDT 616

Query: 363 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 455
           ETVS DGFLKRLIEHFEE+GEYLSASEY NE
Sbjct: 617 ETVSGDGFLKRLIEHFEEHGEYLSASEYLNE 647


>ref|XP_002526724.1| DNA-binding protein smubp-2, putative [Ricinus communis]
           gi|223533913|gb|EEF35638.1| DNA-binding protein smubp-2,
           putative [Ricinus communis]
          Length = 644

 Score =  269 bits (687), Expect = 6e-70
 Identities = 131/151 (86%), Positives = 148/151 (98%)
 Frame = +3

Query: 3   CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIITPYAAQVVLLRIIRSKDD 182
           CDMEEKKDEE+ST+NEGEADVA+AHA+RL+++GVQ+SDIGIITPYAAQVVLL+I+RS +D
Sbjct: 494 CDMEEKKDEEESTLNEGEADVAVAHAKRLVENGVQASDIGIITPYAAQVVLLKILRSNED 553

Query: 183 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 362
           KLKD+EISTVDGFQGREKEAIIISMVRSNSKKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 554 KLKDVEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 613

Query: 363 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 455
           ETV+SDGFLKRLIE+FEE+GEYLSA+EY NE
Sbjct: 614 ETVTSDGFLKRLIEYFEEHGEYLSAAEYCNE 644


>ref|XP_002277619.1| PREDICTED: DNA-binding protein SMUBP-2-like [Vitis vinifera]
          Length = 647

 Score =  265 bits (676), Expect = 1e-68
 Identities = 130/151 (86%), Positives = 145/151 (96%)
 Frame = +3

Query: 3   CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIITPYAAQVVLLRIIRSKDD 182
           CDMEEKKDEEDSTMNEGEA+VAI+HA+RL+ SGVQ+SDIGIITPYAAQVVLL+++++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLLKMMKNNDD 556

Query: 183 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 362
           KLKD+EISTVDGFQGREKEAIIISM RSN KKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 616

Query: 363 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 455
           ETV+SD FLKRLIE+FEENGEYLSASEYG+E
Sbjct: 617 ETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647


>emb|CBI29875.3| unnamed protein product [Vitis vinifera]
          Length = 647

 Score =  265 bits (676), Expect = 1e-68
 Identities = 130/151 (86%), Positives = 145/151 (96%)
 Frame = +3

Query: 3   CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIITPYAAQVVLLRIIRSKDD 182
           CDMEEKKDEEDSTMNEGEA+VAI+HA+RL+ SGVQ+SDIGIITPYAAQVVLL+++++ DD
Sbjct: 497 CDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLLKMMKNNDD 556

Query: 183 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 362
           KLKD+EISTVDGFQGREKEAIIISM RSN KKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 557 KLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 616

Query: 363 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 455
           ETV+SD FLKRLIE+FEENGEYLSASEYG+E
Sbjct: 617 ETVTSDKFLKRLIEYFEENGEYLSASEYGHE 647


>emb|CAN80641.1| hypothetical protein VITISV_016912 [Vitis vinifera]
          Length = 649

 Score =  265 bits (676), Expect = 1e-68
 Identities = 130/151 (86%), Positives = 145/151 (96%)
 Frame = +3

Query: 3   CDMEEKKDEEDSTMNEGEADVAIAHARRLIQSGVQSSDIGIITPYAAQVVLLRIIRSKDD 182
           CDMEEKKDEEDSTMNEGEA+VAI+HA+RL+ SGVQ+SDIGIITPYAAQVVLL+++++ DD
Sbjct: 499 CDMEEKKDEEDSTMNEGEAEVAISHAKRLVDSGVQASDIGIITPYAAQVVLLKMMKNNDD 558

Query: 183 KLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLRDQRRMNVAVTRARRQCCLVCDT 362
           KLKD+EISTVDGFQGREKEAIIISM RSN KKEVGFL D+RRMNVAVTRARRQCCLVCDT
Sbjct: 559 KLKDMEISTVDGFQGREKEAIIISMARSNPKKEVGFLSDRRRMNVAVTRARRQCCLVCDT 618

Query: 363 ETVSSDGFLKRLIEHFEENGEYLSASEYGNE 455
           ETV+SD FLKRLIE+FEENGEYLSASEYG+E
Sbjct: 619 ETVTSDKFLKRLIEYFEENGEYLSASEYGHE 649


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