BLASTX nr result

ID: Coptis23_contig00007366 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007366
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253...   138   2e-30
ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|2...   127   4e-27
ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|2...   115   2e-23
ref|XP_002520838.1| conserved hypothetical protein [Ricinus comm...    97   9e-18
ref|XP_002328989.1| predicted protein [Populus trichocarpa] gi|2...    94   8e-17

>ref|XP_002268948.1| PREDICTED: uncharacterized protein LOC100253378 [Vitis vinifera]
          Length = 208

 Score =  138 bits (348), Expect = 2e-30
 Identities = 92/218 (42%), Positives = 115/218 (52%), Gaps = 10/218 (4%)
 Frame = -2

Query: 950 MFSGNSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPK 771
           M     DVPQK LQIK+DDKF+SRLLSKESS+ANPS RVYYGG +GA+PF WESQPGTPK
Sbjct: 1   MLRSEQDVPQKRLQIKEDDKFFSRLLSKESSMANPSSRVYYGGVTGAVPFTWESQPGTPK 60

Query: 770 NKFCDXXXXXXXXXXSFH--XXXXXXXXXXXXXKLIHTIFPRLSVRKTH-------ATPA 618
             F +          S++                L+H+IFPR++    +       ++P+
Sbjct: 61  YTFSESSLPPLTPPPSYYSNSMDKKPNKKHSRSNLLHSIFPRMNHNNNNPKKPNVLSSPS 120

Query: 617 -XXXXXXXXXXXXXXXXXXXXXXSKTHRRLPSSLSSFDYRGDYEEPTLGSPTSTLCFSNV 441
                                      RR  SS SSFD   DYEE  + SPTSTLCF   
Sbjct: 121 LSSSCSSWSSPRSSSMSGSLTPNFLRRRRCCSSRSSFDSGADYEEEAV-SPTSTLCF--- 176

Query: 440 SRQSSGGFKGCYSMVIIKNAFSSMIGGHGSNGHRQGTA 327
             +   G +G  S+V++K AF SM+ GHGS    QGTA
Sbjct: 177 --RMGSGLRGRCSVVVMKKAFLSMV-GHGSG---QGTA 208


>ref|XP_002309177.1| predicted protein [Populus trichocarpa] gi|222855153|gb|EEE92700.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  127 bits (320), Expect = 4e-27
 Identities = 80/186 (43%), Positives = 97/186 (52%), Gaps = 8/186 (4%)
 Frame = -2

Query: 932 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 753
           D+PQK+LQIKQDDKF+SRLLS+ESS+ANPS RVYYGG S  +PF WESQPGTPK  FC+ 
Sbjct: 11  DLPQKALQIKQDDKFFSRLLSRESSMANPSFRVYYGGVSVGVPFVWESQPGTPKYTFCEN 70

Query: 752 XXXXXXXXXSFH-XXXXXXXXXXXXXKLIHTIFPRLSVRK----THATPAXXXXXXXXXX 588
                    S++               L+H +F R + +K    T AT            
Sbjct: 71  TLPPLTPPPSYYRNSDKKTIKKHSRSSLLHLLFSRNNPKKNNVSTSATNLSSTPSSASWS 130

Query: 587 XXXXXXXXXXXXSKTHRRLPSSLSSFDYR--GDYEEPTLGSPTSTLCFSNVSRQ-SSGGF 417
                            R  S  SSFD R   D EE  +GSPTSTLCF    R  S+GG 
Sbjct: 131 SLNSSSLLTPRKYHERSRYSSRGSSFDSRVFEDVEESHMGSPTSTLCFGISGRNASTGGL 190

Query: 416 KGCYSM 399
           +GCY +
Sbjct: 191 RGCYGV 196


>ref|XP_002323658.1| predicted protein [Populus trichocarpa] gi|222868288|gb|EEF05419.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  115 bits (287), Expect = 2e-23
 Identities = 77/192 (40%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
 Frame = -2

Query: 932 DVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKNKFCDX 753
           D PQK+L++KQDDKF+SRL+SKE+S+ANPS RVYYGG S A+PF WESQPGTPK  FC+ 
Sbjct: 10  DHPQKALEMKQDDKFFSRLMSKENSMANPSFRVYYGGVSVAVPFVWESQPGTPKYTFCEK 69

Query: 752 XXXXXXXXXSFH-XXXXXXXXXXXXXKLIHTIFPRLSVRKTHATPA------XXXXXXXX 594
                    S++               L+  +FPR ++RKT+ + +              
Sbjct: 70  TLPPLTPPPSYYTNSNKKPTKNHSRSNLLRFLFPRNNLRKTNVSSSATNLSTSPSSASWS 129

Query: 593 XXXXXXXXXXXXXXSKTHRR--LPSSLSSFDYR--GDYEEP-TLG-SPTSTLCFSNVSRQ 432
                          K H R    S  SSFD R   D+EE   +G SP+S LCF    R 
Sbjct: 130 SLTSSSNLRSLSTPRKYHERSGFSSRGSSFDSRVFDDFEESHNMGSSPSSKLCFGISGRS 189

Query: 431 -SSGGFKGCYSM 399
            S+GG +GCY +
Sbjct: 190 TSTGGLRGCYGV 201


>ref|XP_002520838.1| conserved hypothetical protein [Ricinus communis]
           gi|223539969|gb|EEF41547.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 233

 Score = 96.7 bits (239), Expect = 9e-18
 Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 21/220 (9%)
 Frame = -2

Query: 938 NSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPKN-KF 762
           + ++ Q+SL+IK+D+KF++R++SKE+S+AN S RVYYGGASGA+PF WES+PGTPK+  F
Sbjct: 8   HDELNQESLEIKKDEKFFTRIMSKETSMANSSCRVYYGGASGAVPFTWESRPGTPKHTSF 67

Query: 761 CD---XXXXXXXXXXSFHXXXXXXXXXXXXXKLIHTIFPRLSVRKT-HATP--------- 621
            D              +               L +TI PRL  +KT H +P         
Sbjct: 68  ADNTSNIPPLTPPPSYYSTSKSKSMRKRTKQNLFNTIIPRLMTKKTSHVSPSSSMSSTTT 127

Query: 620 ----AXXXXXXXXXXXXXXXXXXXXXXSKTHRRLPSSLSSFDYRGDYEEPTLG---SPTS 462
               +                      S+ H     S S   Y  D ++   G     +S
Sbjct: 128 SSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLELFSSS 187

Query: 461 TLCFSNVSRQSSGGFKGCYSMVIIKNAFSSMIGGHGSNGH 342
            LC+   S+     F G Y M  +K+A  S++ GHG+NGH
Sbjct: 188 RLCYGGKSK-GLNVFGGRYIMENMKSALLSIV-GHGNNGH 225


>ref|XP_002328989.1| predicted protein [Populus trichocarpa] gi|222839223|gb|EEE77574.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 93.6 bits (231), Expect = 8e-17
 Identities = 69/193 (35%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
 Frame = -2

Query: 950 MFSGNSDVPQKSLQIKQDDKFYSRLLSKESSLANPSLRVYYGGASGAIPFNWESQPGTPK 771
           M S   +V Q+SL+IKQ+DKF++R++SKESS+AN S RVYYGGASGAIPF WES+PGTPK
Sbjct: 1   MPSDGQEVSQQSLEIKQNDKFFTRIMSKESSMANSSNRVYYGGASGAIPFMWESRPGTPK 60

Query: 770 NKFCDXXXXXXXXXXSFHXXXXXXXXXXXXXKLIHTIFPRLSVRKTHATPAXXXXXXXXX 591
           +   D          S+H                       S+ K +A P          
Sbjct: 61  HTLADACLPPLTPPPSYHSSSKSN-----------------SMHKNNANP---------- 93

Query: 590 XXXXXXXXXXXXXSKTHRRLPSSLSSFDYR-GDYEEP--TLGSPTSTLCFSNVSRQSSGG 420
                              L +    FD R  DY+     LGSP ST C+ +V R++  G
Sbjct: 94  -----------------NILTTLFHRFDERDDDYDNDGHGLGSPISTSCY-DVKRKAVNG 135

Query: 419 FKGCYSMVIIKNA 381
             G + M  +K+A
Sbjct: 136 CHGYHFMRNMKSA 148


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