BLASTX nr result

ID: Coptis23_contig00007350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007350
         (970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259...   212   1e-52
emb|CAN69770.1| hypothetical protein VITISV_022066 [Vitis vinifera]   200   5e-49
ref|XP_003631991.1| PREDICTED: uncharacterized protein LOC100259...   198   2e-48
ref|XP_002312530.1| predicted protein [Populus trichocarpa] gi|1...   190   4e-46
gb|AFK37480.1| unknown [Lotus japonicus]                              190   5e-46

>ref|XP_002282406.1| PREDICTED: uncharacterized protein LOC100259756 isoform 1 [Vitis
           vinifera] gi|297737050|emb|CBI26251.3| unnamed protein
           product [Vitis vinifera]
          Length = 209

 Score =  212 bits (540), Expect = 1e-52
 Identities = 116/185 (62%), Positives = 137/185 (74%)
 Frame = -2

Query: 762 KLQSGNGLVLPAQENSFRRRRVFLCSGATLIASFSAHCGLIPLXXXXXXXXXXXXXXXXX 583
           KL+S   +VLP+QE+   RR V + SGA+L+A  + + G +PL                 
Sbjct: 28  KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDE-- 85

Query: 582 DKGIVGAITSLFDPNEKTKSGKVLPKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAA 403
            KG+VGAI SLFDPNEK KSGKVLPK YL +AREVV  LRESLKEDP+D AKFRRTADAA
Sbjct: 86  -KGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAA 144

Query: 402 KEAIREYLNDWRGQKQVETEESYVALVKAIRSLASFYSKSGPSAALPEEVKANILDDLQT 223
           KE+IREYL+ WRG++ V +EESY  L KAIRSLASFYSK+GPSAALPEEVK+ ILDDL T
Sbjct: 145 KESIREYLSSWRGKQTVVSEESYAMLEKAIRSLASFYSKAGPSAALPEEVKSEILDDLNT 204

Query: 222 AEAYL 208
           AE +L
Sbjct: 205 AEEFL 209


>emb|CAN69770.1| hypothetical protein VITISV_022066 [Vitis vinifera]
          Length = 230

 Score =  200 bits (508), Expect = 5e-49
 Identities = 116/206 (56%), Positives = 137/206 (66%), Gaps = 21/206 (10%)
 Frame = -2

Query: 762 KLQSGNGLVLPAQENSFRRRRVFLCSGATLIASFSAHCGLIPLXXXXXXXXXXXXXXXXX 583
           KL+S   +VLP+QE+   RR V + SGA+L+A  + + G +PL                 
Sbjct: 28  KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDE-- 85

Query: 582 DKGIVGAITSLFDPNEKTKSGKVLPKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAA 403
            KG+VGAI SLFDPNEK KSGKVLPK YL +AREVV  LRESLKEDP+D AKFRRTADAA
Sbjct: 86  -KGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAA 144

Query: 402 KEAIREYLNDWRGQKQVETE---------------------ESYVALVKAIRSLASFYSK 286
           KE+IREYL+ WRG++ V +E                     ESY  L KAIRSLASFYSK
Sbjct: 145 KESIREYLSSWRGKQTVVSEVCILQKHFWFLRWIPVVTVXHESYAMLEKAIRSLASFYSK 204

Query: 285 SGPSAALPEEVKANILDDLQTAEAYL 208
           +GPSAALPEEVK+ ILDDL TAE +L
Sbjct: 205 AGPSAALPEEVKSEILDDLNTAEEFL 230


>ref|XP_003631991.1| PREDICTED: uncharacterized protein LOC100259756 isoform 2 [Vitis
           vinifera]
          Length = 235

 Score =  198 bits (503), Expect = 2e-48
 Identities = 116/211 (54%), Positives = 137/211 (64%), Gaps = 26/211 (12%)
 Frame = -2

Query: 762 KLQSGNGLVLPAQENSFRRRRVFLCSGATLIASFSAHCGLIPLXXXXXXXXXXXXXXXXX 583
           KL+S   +VLP+QE+   RR V + SGA+L+A  + + G +PL                 
Sbjct: 28  KLKSRCHIVLPSQESPSSRRHVLVGSGASLVAILTFNGGFLPLPVWAEDESNGQEDDE-- 85

Query: 582 DKGIVGAITSLFDPNEKTKSGKVLPKNYLKTAREVVNALRESLKEDPRDNAKFRRTADAA 403
            KG+VGAI SLFDPNEK KSGKVLPK YL +AREVV  LRESLKEDP+D AKFRRTADAA
Sbjct: 86  -KGVVGAIKSLFDPNEKIKSGKVLPKAYLNSAREVVKTLRESLKEDPKDIAKFRRTADAA 144

Query: 402 KEAIREYLNDWRGQKQVET--------------------------EESYVALVKAIRSLA 301
           KE+IREYL+ WRG++ V +                          EESY  L KAIRSLA
Sbjct: 145 KESIREYLSSWRGKQTVVSEYKGSLQLSSTAYHTRTEHFAERLGNEESYAMLEKAIRSLA 204

Query: 300 SFYSKSGPSAALPEEVKANILDDLQTAEAYL 208
           SFYSK+GPSAALPEEVK+ ILDDL TAE +L
Sbjct: 205 SFYSKAGPSAALPEEVKSEILDDLNTAEEFL 235


>ref|XP_002312530.1| predicted protein [Populus trichocarpa] gi|118485936|gb|ABK94813.1|
           unknown [Populus trichocarpa]
           gi|222852350|gb|EEE89897.1| predicted protein [Populus
           trichocarpa]
          Length = 204

 Score =  190 bits (483), Expect = 4e-46
 Identities = 111/193 (57%), Positives = 129/193 (66%)
 Frame = -2

Query: 786 TLKPPPKDKLQSGNGLVLPAQENSFRRRRVFLCSGATLIASFSAHCGLIPLXXXXXXXXX 607
           T KP    KL S    VL +Q     RR V + S A+ +   + +C L PL         
Sbjct: 21  TSKPDIDYKLNSRCNAVLSSQAALPSRRHVLVFS-ASFVTVLTLNCFLTPLQARAKEEEK 79

Query: 606 XXXXXXXXDKGIVGAITSLFDPNEKTKSGKVLPKNYLKTAREVVNALRESLKEDPRDNAK 427
                     G+ GAI SLFDPNEKTKSGK+LPK YLK AREVV  LRESLKED +D AK
Sbjct: 80  DD--------GVAGAIKSLFDPNEKTKSGKLLPKAYLKAAREVVKNLRESLKEDTKDIAK 131

Query: 426 FRRTADAAKEAIREYLNDWRGQKQVETEESYVALVKAIRSLASFYSKSGPSAALPEEVKA 247
           FRRTADAAKE+IREYL  WRGQ++V  EESYV L KAIRSLASFYS++GPSA LPEEV++
Sbjct: 132 FRRTADAAKESIREYLGSWRGQEKVVREESYVELEKAIRSLASFYSRAGPSAQLPEEVRS 191

Query: 246 NILDDLQTAEAYL 208
            IL+DL TAE +L
Sbjct: 192 EILNDLNTAEEFL 204


>gb|AFK37480.1| unknown [Lotus japonicus]
          Length = 208

 Score =  190 bits (482), Expect = 5e-46
 Identities = 109/186 (58%), Positives = 123/186 (66%)
 Frame = -2

Query: 765 DKLQSGNGLVLPAQENSFRRRRVFLCSGATLIASFSAHCGLIPLXXXXXXXXXXXXXXXX 586
           DKLQ  + + LP  E S  RR + L  G +L+       GL PL                
Sbjct: 28  DKLQFRSNIALPPLEASSSRRHLLLSVGTSLVTMTCG--GLSPLMASAEENSADKEDDD- 84

Query: 585 XDKGIVGAITSLFDPNEKTKSGKVLPKNYLKTAREVVNALRESLKEDPRDNAKFRRTADA 406
             KG+VGAI SLFDPNEK+KSGKVLPK YLK+AREVV  LRESL E P DNAKFRRTADA
Sbjct: 85  --KGVVGAIKSLFDPNEKSKSGKVLPKAYLKSAREVVKTLRESLNEVPDDNAKFRRTADA 142

Query: 405 AKEAIREYLNDWRGQKQVETEESYVALVKAIRSLASFYSKSGPSAALPEEVKANILDDLQ 226
           AKE+IR+YL  WRG + V  EESY  L KAIRSLA FYS++GPSA LPEEVK  ILD L 
Sbjct: 143 AKESIRDYLGGWRGNQDVAQEESYDMLEKAIRSLAKFYSRAGPSAPLPEEVKTEILDYLN 202

Query: 225 TAEAYL 208
           TAE +L
Sbjct: 203 TAEEFL 208


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