BLASTX nr result

ID: Coptis23_contig00007340 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007340
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ11251.1| Ted2 [Gossypium hirsutum]                               98   8e-19
ref|XP_002271007.2| PREDICTED: quinone oxidoreductase 1 [Vitis v...    95   5e-18
emb|CBI36442.3| unnamed protein product [Vitis vinifera]               95   5e-18
emb|CAN83730.1| hypothetical protein VITISV_029360 [Vitis vinifera]    95   5e-18
ref|XP_002326531.1| predicted protein [Populus trichocarpa] gi|2...    95   7e-18

>gb|ACJ11251.1| Ted2 [Gossypium hirsutum]
          Length = 324

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 50/80 (62%), Positives = 54/80 (67%)
 Frame = -2

Query: 241 TKGREAVETMTAVGPGLTGRNVGDVVAYGGNPMGSYTEEQILXXXXXXXXXXXXXXXVGA 62
           T G EAV  +TAVGPGLTGR VGD+VAY GNPMGSY EEQIL                 A
Sbjct: 60  TPGMEAVGEVTAVGPGLTGRKVGDIVAYAGNPMGSYAEEQILPADKLVPVPPSVDPITAA 119

Query: 61  SVMLKGMTAWFLLHRCFKVE 2
           S+MLKGMTA FL+ RCFKVE
Sbjct: 120 SIMLKGMTAQFLVRRCFKVE 139


>ref|XP_002271007.2| PREDICTED: quinone oxidoreductase 1 [Vitis vinifera]
          Length = 395

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 55/80 (68%)
 Frame = -2

Query: 241 TKGREAVETMTAVGPGLTGRNVGDVVAYGGNPMGSYTEEQILXXXXXXXXXXXXXXXVGA 62
           T G EAV  +TAVGPG+TGR VGDVVAY G PMGSY+EEQIL               VGA
Sbjct: 124 TLGMEAVGVVTAVGPGITGRKVGDVVAYAGTPMGSYSEEQILPANRVVPVPPSIDPTVGA 183

Query: 61  SVMLKGMTAWFLLHRCFKVE 2
           S+MLKGMT  +L+ RCFKVE
Sbjct: 184 SIMLKGMTVHYLVRRCFKVE 203


>emb|CBI36442.3| unnamed protein product [Vitis vinifera]
          Length = 331

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 55/80 (68%)
 Frame = -2

Query: 241 TKGREAVETMTAVGPGLTGRNVGDVVAYGGNPMGSYTEEQILXXXXXXXXXXXXXXXVGA 62
           T G EAV  +TAVGPG+TGR VGDVVAY G PMGSY+EEQIL               VGA
Sbjct: 60  TLGMEAVGVVTAVGPGITGRKVGDVVAYAGTPMGSYSEEQILPANRVVPVPPSIDPTVGA 119

Query: 61  SVMLKGMTAWFLLHRCFKVE 2
           S+MLKGMT  +L+ RCFKVE
Sbjct: 120 SIMLKGMTVHYLVRRCFKVE 139


>emb|CAN83730.1| hypothetical protein VITISV_029360 [Vitis vinifera]
          Length = 331

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 49/80 (61%), Positives = 55/80 (68%)
 Frame = -2

Query: 241 TKGREAVETMTAVGPGLTGRNVGDVVAYGGNPMGSYTEEQILXXXXXXXXXXXXXXXVGA 62
           T G EAV  +TAVGPG+TGR VGDVVAY G PMGSY+EEQIL               VGA
Sbjct: 60  TXGMEAVGVVTAVGPGITGRKVGDVVAYAGTPMGSYSEEQILPANRVVPVPPSIDPTVGA 119

Query: 61  SVMLKGMTAWFLLHRCFKVE 2
           S+MLKGMT  +L+ RCFKVE
Sbjct: 120 SIMLKGMTVHYLVXRCFKVE 139


>ref|XP_002326531.1| predicted protein [Populus trichocarpa] gi|222833853|gb|EEE72330.1|
           predicted protein [Populus trichocarpa]
          Length = 324

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 50/78 (64%), Positives = 53/78 (67%)
 Frame = -2

Query: 235 GREAVETMTAVGPGLTGRNVGDVVAYGGNPMGSYTEEQILXXXXXXXXXXXXXXXVGASV 56
           GREAV  + AVGPGLTGR VGDVVAY G+PMGSY EEQIL               + ASV
Sbjct: 62  GREAVGEVIAVGPGLTGRKVGDVVAYAGDPMGSYAEEQILPANKVVSVPESISPVIAASV 121

Query: 55  MLKGMTAWFLLHRCFKVE 2
           MLKGMT  FLL RCFKVE
Sbjct: 122 MLKGMTTQFLLRRCFKVE 139


Top