BLASTX nr result

ID: Coptis23_contig00007337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007337
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW55870.1| putative MATE efflux family protein [Zea mays]          67   2e-09
ref|XP_002441747.1| hypothetical protein SORBIDRAFT_08g001710 [S...    67   2e-09
gb|ACG27773.1| transparent testa 12 protein [Zea mays]                 67   2e-09
gb|ACF87410.1| unknown [Zea mays] gi|413915937|gb|AFW55869.1| pu...    67   2e-09
ref|NP_001130797.1| uncharacterized protein LOC100191901 [Zea ma...    67   2e-09

>gb|AFW55870.1| putative MATE efflux family protein [Zea mays]
          Length = 435

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 535 IWIGMLIGTAVQTIVLLIITWRTDWDKQVTLAQQHVKKWVVPE 407
           IWIGML+GT VQTIVLL IT +TDWDKQV  AQ+ +KKW + E
Sbjct: 382 IWIGMLLGTLVQTIVLLFITVKTDWDKQVVAAQERLKKWYMEE 424


>ref|XP_002441747.1| hypothetical protein SORBIDRAFT_08g001710 [Sorghum bicolor]
           gi|241942440|gb|EES15585.1| hypothetical protein
           SORBIDRAFT_08g001710 [Sorghum bicolor]
          Length = 525

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 535 IWIGMLIGTAVQTIVLLIITWRTDWDKQVTLAQQHVKKWVVPE 407
           IWIGML+GT VQTIVLL IT RTDW+KQV  AQ+ +KKW + E
Sbjct: 472 IWIGMLLGTLVQTIVLLFITLRTDWEKQVVTAQERLKKWYMEE 514


>gb|ACG27773.1| transparent testa 12 protein [Zea mays]
          Length = 535

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 535 IWIGMLIGTAVQTIVLLIITWRTDWDKQVTLAQQHVKKWVVPE 407
           IWIGML+GT VQTIVLL IT +TDWDKQV  AQ+ +KKW + E
Sbjct: 482 IWIGMLLGTLVQTIVLLFITVKTDWDKQVVAAQERLKKWYMEE 524


>gb|ACF87410.1| unknown [Zea mays] gi|413915937|gb|AFW55869.1| putative MATE efflux
           family protein [Zea mays]
          Length = 474

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 535 IWIGMLIGTAVQTIVLLIITWRTDWDKQVTLAQQHVKKWVVPE 407
           IWIGML+GT VQTIVLL IT +TDWDKQV  AQ+ +KKW + E
Sbjct: 421 IWIGMLLGTLVQTIVLLFITVKTDWDKQVVAAQERLKKWYMEE 463


>ref|NP_001130797.1| uncharacterized protein LOC100191901 [Zea mays]
           gi|194690138|gb|ACF79153.1| unknown [Zea mays]
           gi|223948505|gb|ACN28336.1| unknown [Zea mays]
           gi|223948635|gb|ACN28401.1| unknown [Zea mays]
           gi|224028405|gb|ACN33278.1| unknown [Zea mays]
           gi|413915936|gb|AFW55868.1| putative MATE efflux family
           protein [Zea mays]
          Length = 533

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/43 (69%), Positives = 35/43 (81%)
 Frame = -1

Query: 535 IWIGMLIGTAVQTIVLLIITWRTDWDKQVTLAQQHVKKWVVPE 407
           IWIGML+GT VQTIVLL IT +TDWDKQV  AQ+ +KKW + E
Sbjct: 480 IWIGMLLGTLVQTIVLLFITVKTDWDKQVVAAQERLKKWYMEE 522


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