BLASTX nr result

ID: Coptis23_contig00007317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007317
         (926 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568922.1| Pyridoxal biosynthesis protein PDX2 [Arabidopsi...   353   2e-95
ref|XP_002866384.1| ATPDX2/EMB2407/PDX2 [Arabidopsis lyrata subs...   352   7e-95
gb|ADZ47881.1| pyridoxial biosynthesis 2 [Arabidopsis thaliana]       346   5e-93
ref|XP_002285095.1| PREDICTED: pyridoxal biosynthesis protein PD...   345   7e-93
dbj|BAB08237.1| amidotransferase hisH-like protein [Arabidopsis ...   345   1e-92

>ref|NP_568922.1| Pyridoxal biosynthesis protein PDX2 [Arabidopsis thaliana]
           gi|75154761|sp|Q8LAD0.1|PDX2_ARATH RecName:
           Full=Pyridoxal biosynthesis protein PDX2; AltName:
           Full=Probable glutamine amidotransferase; Short=AtPDX2;
           AltName: Full=Protein EMBRYO DEFECTIVE 2407
           gi|21593486|gb|AAM65453.1| imidazoleglycerol-phosphate
           synthase subunit H-like [Arabidopsis thaliana]
           gi|26449721|dbj|BAC41984.1| putative
           imidazoleglycerol-phosphate synthase subunit H
           [Arabidopsis thaliana] gi|28950813|gb|AAO63330.1|
           At5g60540 [Arabidopsis thaliana]
           gi|332009958|gb|AED97341.1| Pyridoxal biosynthesis
           protein PDX2 [Arabidopsis thaliana]
          Length = 255

 Score =  353 bits (907), Expect = 2e-95
 Identities = 189/259 (72%), Positives = 208/259 (80%), Gaps = 13/259 (5%)
 Frame = -3

Query: 840 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 661
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 660 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 481
           FPALREFVKMGKPVWGTCAGLIFLAD+AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 480 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPSRK-----PTVQPVXXX 316
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VPS K      TVQ     
Sbjct: 121 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQ----I 176

Query: 315 XXXXXXXXXKVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------IN 157
                    KVIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S       ++
Sbjct: 177 QEEDALPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVS 236

Query: 156 EGDVSDN-EPPRIDLPIFQ 103
            G+ S   EP + DLPIFQ
Sbjct: 237 VGETSAGPEPAKPDLPIFQ 255


>ref|XP_002866384.1| ATPDX2/EMB2407/PDX2 [Arabidopsis lyrata subsp. lyrata]
           gi|297312219|gb|EFH42643.1| ATPDX2/EMB2407/PDX2
           [Arabidopsis lyrata subsp. lyrata]
          Length = 255

 Score =  352 bits (903), Expect = 7e-95
 Identities = 187/259 (72%), Positives = 205/259 (79%), Gaps = 13/259 (5%)
 Frame = -3

Query: 840 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 661
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 660 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 481
           FPALREFVKMGKPVWGTCAGLIFLAD+AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 480 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPSRK-----PTVQPVXXX 316
           D+ VP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VPS K      TVQ     
Sbjct: 121 DISVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQ----I 176

Query: 315 XXXXXXXXXKVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLSINEGDV--- 145
                    KVIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S N  +    
Sbjct: 177 QEEDALPETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSNSSNTVVS 236

Query: 144 -----SDNEPPRIDLPIFQ 103
                +  EP + DLPIFQ
Sbjct: 237 VGETSAGPEPAKPDLPIFQ 255


>gb|ADZ47881.1| pyridoxial biosynthesis 2 [Arabidopsis thaliana]
          Length = 255

 Score =  346 bits (887), Expect = 5e-93
 Identities = 186/259 (71%), Positives = 206/259 (79%), Gaps = 13/259 (5%)
 Frame = -3

Query: 840 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 661
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++ IIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSPIIPGGESTTMAKLAEYHNL 60

Query: 660 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 481
           FPALREFVKMGKPVWGTCAGLIFLA +AVGQKEGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLAGRAVGQKEGGQELVGGLDCTVHRNFFGSQIQSFEA 120

Query: 480 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPSRK-----PTVQPVXXX 316
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VPS K      TVQ     
Sbjct: 121 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKVLYSSSTVQ----I 176

Query: 315 XXXXXXXXXKVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------IN 157
                    KVIVAVKQGNLLATAF+PELTADTRWHSYF+KM  + EQ  S       ++
Sbjct: 177 QEEDALPETKVIVAVKQGNLLATAFYPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVS 236

Query: 156 EGDVSDN-EPPRIDLPIFQ 103
            G+ S   EP + DLPIFQ
Sbjct: 237 VGETSAGPEPAKPDLPIFQ 255


>ref|XP_002285095.1| PREDICTED: pyridoxal biosynthesis protein PDX2-like [Vitis
           vinifera]
          Length = 252

 Score =  345 bits (886), Expect = 7e-93
 Identities = 187/252 (74%), Positives = 201/252 (79%), Gaps = 6/252 (2%)
 Frame = -3

Query: 840 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 661
           MAVGVLALQGSFNEHIAALR+LGVKG EIRK EQLE + +LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MAVGVLALQGSFNEHIAALRKLGVKGVEIRKPEQLEQVGSLIIPGGESTTMAKLAEYHNL 60

Query: 660 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 481
           FPALREFVK+GKPVWGTCAGLIFLA+KAVGQK GGQELVGGLDC VHRNFFGSQIQSFE 
Sbjct: 61  FPALREFVKLGKPVWGTCAGLIFLANKAVGQKTGGQELVGGLDCTVHRNFFGSQIQSFET 120

Query: 480 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPSRKPTVQ-PVXXXXXXX 304
            L VPEL A EGGP +FRGVFIRAPAILE G  VEVLADY VPS K              
Sbjct: 121 QLSVPELAAKEGGPETFRGVFIRAPAILEVGPKVEVLADYPVPSGKLFDSISALEAPQEN 180

Query: 303 XXXXXKVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNK-GEQ---TLSINEG-DVSD 139
                KVIVAVKQGNLL TAFHPELTADTRWHSYF+KM ++ GE+   ++S+  G D S 
Sbjct: 181 AGSEKKVIVAVKQGNLLGTAFHPELTADTRWHSYFLKMTSEVGEEASSSISVAGGEDTSS 240

Query: 138 NEPPRIDLPIFQ 103
           NE    DLPI+Q
Sbjct: 241 NEQLGNDLPIYQ 252


>dbj|BAB08237.1| amidotransferase hisH-like protein [Arabidopsis thaliana]
          Length = 240

 Score =  345 bits (884), Expect = 1e-92
 Identities = 184/254 (72%), Positives = 203/254 (79%), Gaps = 8/254 (3%)
 Frame = -3

Query: 840 MAVGVLALQGSFNEHIAALRRLGVKGTEIRKAEQLETINALIIPGGESTTMAKLAEYHNL 661
           M VGVLALQGSFNEHIAALRRLGV+G EIRKA+QL T+++LIIPGGESTTMAKLAEYHNL
Sbjct: 1   MTVGVLALQGSFNEHIAALRRLGVQGVEIRKADQLLTVSSLIIPGGESTTMAKLAEYHNL 60

Query: 660 FPALREFVKMGKPVWGTCAGLIFLADKAVGQKEGGQELVGGLDCLVHRNFFGSQIQSFEA 481
           FPALREFVKMGKPVWGTCAGLIFLAD+AV   EGGQELVGGLDC VHRNFFGSQIQSFEA
Sbjct: 61  FPALREFVKMGKPVWGTCAGLIFLADRAV---EGGQELVGGLDCTVHRNFFGSQIQSFEA 117

Query: 480 DLLVPELVATEGGPASFRGVFIRAPAILEAGTGVEVLADYSVPSRKPTVQPVXXXXXXXX 301
           D+LVP+L + EGGP ++RGVFIRAPA+L+ G  VEVLADY VPS K    P         
Sbjct: 118 DILVPQLTSQEGGPETYRGVFIRAPAVLDVGPDVEVLADYPVPSNKEDALP--------- 168

Query: 300 XXXXKVIVAVKQGNLLATAFHPELTADTRWHSYFMKMVNKGEQTLS-------INEGDVS 142
               KVIVAVKQGNLLATAFHPELTADTRWHSYF+KM  + EQ  S       ++ G+ S
Sbjct: 169 --ETKVIVAVKQGNLLATAFHPELTADTRWHSYFIKMTKEIEQGASSSSSKTIVSVGETS 226

Query: 141 DN-EPPRIDLPIFQ 103
              EP + DLPIFQ
Sbjct: 227 AGPEPAKPDLPIFQ 240


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