BLASTX nr result

ID: Coptis23_contig00007305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007305
         (1097 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...   128   3e-27
emb|CBI19378.3| unnamed protein product [Vitis vinifera]              107   5e-21
emb|CAN67966.1| hypothetical protein VITISV_037177 [Vitis vinifera]   103   6e-20
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...   101   4e-19
ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19

>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  128 bits (321), Expect = 3e-27
 Identities = 71/160 (44%), Positives = 105/160 (65%), Gaps = 14/160 (8%)
 Frame = +1

Query: 394 SNKAVKHESKFAKCVKAPIRILCKARDFYVKSLTDCSGRMNYGSAVGCPTGPV--NIMPX 567
           + K V  +SK +K +K+P+RIL KARDFYVKS+T+ S R+ YG+ +GCPTG V   +   
Sbjct: 3   TKKPVNKQSKISKFIKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKS 62

Query: 568 XXXXXXXXXYNDEDLRELIRAASQRGLREKLEMEILEHRKASK----------LPRSFTV 717
                      D+D REL+RAAS RGL  + ++ +L+ +++ K          +PRS +V
Sbjct: 63  YSVNSTKSSSRDDDYRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSV 122

Query: 718 GIGKIDEDKACEFEDDLKAEPDKLYPRSKSYAV--TKRTT 831
           GIG+IDE+KAC+  DD+K + D ++PRS+S+AV  T+RTT
Sbjct: 123 GIGRIDEEKACDNFDDIKVKTD-VFPRSRSHAVSATRRTT 161


>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  107 bits (267), Expect = 5e-21
 Identities = 57/141 (40%), Positives = 89/141 (63%), Gaps = 4/141 (2%)
 Frame = +1

Query: 415 ESKFAKCVKAPIRILCKARDFYVKSLTDCSGRMNYGSAVGCPTGPVNIMPXXXXXXXXXX 594
           +++F + +  PIR+L KARDFYV+SLTD + R++ G+A+GCP   ++ +P          
Sbjct: 8   QNRFMRIITIPIRVLSKARDFYVRSLTDAAERVSRGNAMGCPGVHISTLPKSFSVSSSRS 67

Query: 595 YNDEDLRELIRAASQRGLREKLEMEI-LEHRK--ASKLPRSFTVGIGKIDEDKACEFEDD 765
            + ED+  L R+ S      +++M + L+  K  +   PRS +VG+G+IDED+ C+FE+D
Sbjct: 68  GDGEDVGSLSRSGSASSSSNRVDMNVFLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEED 127

Query: 766 -LKAEPDKLYPRSKSYAVTKR 825
               + D LYPRS+SYAVT R
Sbjct: 128 SFNVKADFLYPRSRSYAVTNR 148


>emb|CAN67966.1| hypothetical protein VITISV_037177 [Vitis vinifera]
          Length = 140

 Score =  103 bits (258), Expect = 6e-20
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
 Frame = +1

Query: 430 KCVKAPIRILCKARDFYVKSLTDCSGRMNYGSAVGCPTGPVNIMPXXXXXXXXXXYNDE- 606
           +C+ AP+R+L KA DFY++S+ DCSG + YG  VGCP   V+ +P           ++E 
Sbjct: 2   QCIGAPLRVLAKAGDFYMRSMMDCSGGVGYGGLVGCPALQVSHLPNSFSVSSSKRRDEEL 61

Query: 607 DLRELIRAASQRGLREKLEMEILEHRKASKLPRSFTVG---IGKIDEDKACEF--EDDLK 771
            LRE I   S+R    ++EME    R+     RS++VG   IG+IDE+K CEF  +DD K
Sbjct: 62  RLRETIGRVSKRSGGSRVEME----RRKGVGMRSYSVGIGRIGRIDEEKPCEFVEDDDGK 117

Query: 772 AEPDKLYPRSKSYAVTKRTTLY 837
            + D LYPRS+S AVT R  ++
Sbjct: 118 LKADVLYPRSRSCAVTTRNAVF 139


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  101 bits (251), Expect = 4e-19
 Identities = 63/159 (39%), Positives = 94/159 (59%), Gaps = 16/159 (10%)
 Frame = +1

Query: 397 NKAVKHESKFAKCVKAPIRILCKARDFYVKSLTDCSGRMNYGSAVGCPTGPVNIMPXXXX 576
           NK  + ES   K +KAP+RIL +ARDFY+K + + S ++     + CPTG  N MP    
Sbjct: 4   NKKSRKESTLKKILKAPLRILARARDFYIKGMAEYSDQV---CVMSCPTGNFNTMPRSYS 60

Query: 577 XXXXXXYN-DEDLRELIRAASQRG----LREKLEMEI-----LEHRKAS-----KLPRSF 711
                  + D+D RE +RAAS R        K+ +++       H+K++      +PRS 
Sbjct: 61  VSSTKPNHLDDDRREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRSH 120

Query: 712 TVGIGKIDEDKACEF-EDDLKAEPDKLYPRSKSYAVTKR 825
           TV IG+IDE+K C+F E+D+K + + +YPRS+SYAV+KR
Sbjct: 121 TVAIGRIDEEKPCDFDEEDVKVKTN-VYPRSRSYAVSKR 158


>ref|XP_002301143.1| predicted protein [Populus trichocarpa] gi|222842869|gb|EEE80416.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  100 bits (250), Expect = 5e-19
 Identities = 64/153 (41%), Positives = 90/153 (58%), Gaps = 15/153 (9%)
 Frame = +1

Query: 412 HESKFAKCVKAPIRILCKARDFYVKSLTDCSGRMNYGSAVGCPTGPVNIMPXXXXXXXXX 591
           ++SKF + V  P+R+LCKARD YVKS+ DCS RM YG ++  PTG    +P         
Sbjct: 7   NQSKFMRVVAIPVRLLCKARDVYVKSIIDCSTRMGYGHSMALPTGRYPPLPWSFSIGSSR 66

Query: 592 XYNDEDLRELIRAASQR--GLREKLEMEILEHRKASK---------LPRS--FTVGI-GK 729
             ++ED R+L+RAAS R  G R ++EM I + R+            LP+S  F +GI G+
Sbjct: 67  CNDNEDYRKLVRAASARSLGQRNEIEMFIQQLRQQQSSIMVGSKMFLPKSCGFGMGIMGR 126

Query: 730 IDEDKACEFEDDLKA-EPDKLYPRSKSYAVTKR 825
           ID DK C+FE    A    +L PRS+S+AV ++
Sbjct: 127 IDGDKPCDFETGAGAVVKPQLGPRSRSFAVGRK 159


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