BLASTX nr result
ID: Coptis23_contig00007303
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007303
(1291 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis... 397 e-108
ref|XP_002526504.1| protein with unknown function [Ricinus commu... 395 e-108
ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|2... 391 e-106
ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group] g... 390 e-106
tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, parti... 390 e-106
>ref|XP_002266653.1| PREDICTED: ras-related protein RABH1b [Vitis vinifera]
Length = 208
Score = 397 bits (1020), Expect = e-108
Identities = 204/208 (98%), Positives = 205/208 (98%)
Frame = +2
Query: 179 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 358
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 359 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 538
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNT+KWIEEVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTAKWIEEVRTERGSDVIIVLV 120
Query: 539 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 718
GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 719 QEDMVDVNLKSSNANTSQSQPQGGGCSC 802
QEDMVDVNLKSSN N SQSQPQ GGCSC
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQAGGCSC 208
>ref|XP_002526504.1| protein with unknown function [Ricinus communis]
gi|223534179|gb|EEF35895.1| protein with unknown
function [Ricinus communis]
Length = 208
Score = 395 bits (1016), Expect = e-108
Identities = 203/208 (97%), Positives = 204/208 (98%)
Frame = +2
Query: 179 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 358
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 359 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 538
QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 539 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 718
GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSTK 180
Query: 719 QEDMVDVNLKSSNANTSQSQPQGGGCSC 802
QEDMVDVNLKSSN N SQSQPQ GGC+C
Sbjct: 181 QEDMVDVNLKSSNTNASQSQPQSGGCAC 208
>ref|XP_002302484.1| predicted protein [Populus trichocarpa] gi|222844210|gb|EEE81757.1|
predicted protein [Populus trichocarpa]
Length = 208
Score = 391 bits (1005), Expect = e-106
Identities = 201/208 (96%), Positives = 205/208 (98%)
Frame = +2
Query: 179 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 358
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 359 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 538
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVR+ERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRSERGSDVIIVLV 120
Query: 539 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 718
GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSS+K
Sbjct: 121 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSSK 180
Query: 719 QEDMVDVNLKSSNANTSQSQPQGGGCSC 802
QEDMVDVNLKSSNAN SQSQ Q GGC+C
Sbjct: 181 QEDMVDVNLKSSNANASQSQQQSGGCAC 208
>ref|NP_001059699.1| Os07g0496000 [Oryza sativa Japonica Group]
gi|24059912|dbj|BAC21376.1| GTP-binding protein Rab6
[Oryza sativa Japonica Group]
gi|113611235|dbj|BAF21613.1| Os07g0496000 [Oryza sativa
Japonica Group]
Length = 208
Score = 390 bits (1003), Expect = e-106
Identities = 201/208 (96%), Positives = 204/208 (98%)
Frame = +2
Query: 179 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 358
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 359 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 538
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWIEEVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 120
Query: 539 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 718
GNKTDLVDKRQVSIEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 719 QEDMVDVNLKSSNANTSQSQPQGGGCSC 802
QEDMVDVNLKSSNAN+SQSQ Q GGCSC
Sbjct: 181 QEDMVDVNLKSSNANSSQSQAQAGGCSC 208
>tpg|DAA62790.1| TPA: hypothetical protein ZEAMMB73_332722, partial [Zea mays]
Length = 249
Score = 390 bits (1002), Expect = e-106
Identities = 207/244 (84%), Positives = 214/244 (87%), Gaps = 9/244 (3%)
Frame = +2
Query: 179 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 358
MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL
Sbjct: 1 MAPVSALAKYKLVFLGDQSVGKTSIITRFMYDKFDNTYQATIGIDFLSKTMYLEDRTVRL 60
Query: 359 QLWDTAGQERFRSLIPSYIRDSSVAVIVYDVASRQSFLNTSKWIEEVRTERGSDVIIVLV 538
QLWDTAGQERFRSLIPSYIRDSSVAVIV+DVASRQSFLNTSKWI+EVRTERGSDVIIVLV
Sbjct: 61 QLWDTAGQERFRSLIPSYIRDSSVAVIVFDVASRQSFLNTSKWIDEVRTERGSDVIIVLV 120
Query: 539 GNKTDLVDKRQVSIEEGEAKARDLNVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 718
GNKTDLVDKRQVSIEEGE KA+DL VMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK
Sbjct: 121 GNKTDLVDKRQVSIEEGEGKAKDLGVMFIETSAKAGFNIKALFRKIAAALPGMETLSSAK 180
Query: 719 QEDMVDVNLKSSNANTSQSQPQGGGCSC*CEMLSQDSHVS---------TTFCSFGFATS 871
QEDMVDVNL+S NAN+SQSQ Q GGCSC LS + VS FC +
Sbjct: 181 QEDMVDVNLRSGNANSSQSQAQAGGCSCYSPSLSYSTIVSLLLYPIYHYRVFCRVTVFRT 240
Query: 872 FLSC 883
LSC
Sbjct: 241 VLSC 244