BLASTX nr result

ID: Coptis23_contig00007300 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007300
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_862804.1| cytochrome c biogenesis protein [Calycanthus fl...   113   1e-23
ref|YP_002836139.1| cytochrome c heme attachment protein [Megale...   113   2e-23
gb|ADD30974.1| cytochrome c heme attachment protein [Trochodendr...   111   5e-23
gb|ADD30969.1| cytochrome c heme attachment protein [Liquidambar...   111   7e-23
emb|CAP11968.1| cytochrome c biogenesis protein [Helleborus atro...   110   2e-22

>ref|NP_862804.1| cytochrome c biogenesis protein [Calycanthus floridus var. glaucus]
           gi|75146317|sp|Q7YJT4.1|CCSA_CALFG RecName:
           Full=Cytochrome c biogenesis protein ccsA
           gi|32399430|emb|CAD28771.1| Ycf5 protein [Calycanthus
           floridus var. glaucus]
          Length = 323

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/82 (69%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
 Frame = +1

Query: 10  LYESLMFLSWSFSIIHMVPYFRNHKNKLNAITVPSAIFTQGFATLGLLTKMH-------- 165
           LYESLMFLSWSFSIIHMVPYFRNHKN L+AIT PSAIFTQGFAT GLLT+MH        
Sbjct: 71  LYESLMFLSWSFSIIHMVPYFRNHKNSLSAITAPSAIFTQGFATSGLLTEMHQSAILVPA 130

Query: 166 -QSQWLMMHVNI*VWNDHTFIC 228
            QSQWLMMHV++ +    + +C
Sbjct: 131 LQSQWLMMHVSMMLLGYASLLC 152


>ref|YP_002836139.1| cytochrome c heme attachment protein [Megaleranthis saniculifolia]
           gi|226933931|gb|ACO92064.1| cytochrome c heme attachment
           protein [Megaleranthis saniculifolia]
          Length = 323

 Score =  113 bits (282), Expect = 2e-23
 Identities = 57/82 (69%), Positives = 64/82 (78%), Gaps = 9/82 (10%)
 Frame = +1

Query: 10  LYESLMFLSWSFSIIHMVPYFRNHKNKLNAITVPSAIFTQGFATLGLLTKMH-------- 165
           LYESLMFLSWSFSIIHMVPYFRNHKN L+AIT PSAIFTQGFAT GLLT++H        
Sbjct: 71  LYESLMFLSWSFSIIHMVPYFRNHKNNLHAITAPSAIFTQGFATSGLLTEIHQSTILVPA 130

Query: 166 -QSQWLMMHVNI*VWNDHTFIC 228
            QSQWLMMHV++ V +    +C
Sbjct: 131 LQSQWLMMHVSMMVLSYAALLC 152


>gb|ADD30974.1| cytochrome c heme attachment protein [Trochodendron aralioides]
          Length = 321

 Score =  111 bits (278), Expect = 5e-23
 Identities = 56/82 (68%), Positives = 62/82 (75%), Gaps = 9/82 (10%)
 Frame = +1

Query: 10  LYESLMFLSWSFSIIHMVPYFRNHKNKLNAITVPSAIFTQGFATLGLLTKMH-------- 165
           LYESLMFLSWSFSIIHMVPYF+NHK  LNAIT PS IFTQGFAT GLLT+MH        
Sbjct: 71  LYESLMFLSWSFSIIHMVPYFKNHKKNLNAITAPSTIFTQGFATSGLLTEMHQSAILVPA 130

Query: 166 -QSQWLMMHVNI*VWNDHTFIC 228
            QSQWLMMHV++ V +    +C
Sbjct: 131 LQSQWLMMHVSMMVLSYAALLC 152


>gb|ADD30969.1| cytochrome c heme attachment protein [Liquidambar styraciflua]
          Length = 318

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/82 (68%), Positives = 63/82 (76%), Gaps = 9/82 (10%)
 Frame = +1

Query: 10  LYESLMFLSWSFSIIHMVPYFRNHKNKLNAITVPSAIFTQGFATLGLLTKMH-------- 165
           LYESL+FLSWSFSIIHMVPYF+NHKN L+AIT PSAIFTQGFAT GLLT+MH        
Sbjct: 71  LYESLIFLSWSFSIIHMVPYFKNHKNNLSAITAPSAIFTQGFATSGLLTEMHQSAILVPA 130

Query: 166 -QSQWLMMHVNI*VWNDHTFIC 228
            QSQWLMMHV++ V      +C
Sbjct: 131 LQSQWLMMHVSMMVVGYAALLC 152


>emb|CAP11968.1| cytochrome c biogenesis protein [Helleborus atrorubens]
          Length = 118

 Score =  110 bits (274), Expect = 2e-22
 Identities = 54/71 (76%), Positives = 58/71 (81%), Gaps = 9/71 (12%)
 Frame = +1

Query: 10  LYESLMFLSWSFSIIHMVPYFRNHKNKLNAITVPSAIFTQGFATLGLLTKMH-------- 165
           LYESLMFLSWSFSI+HMVP+FRNHKN LNAIT PSA FTQGFAT GLLT+MH        
Sbjct: 48  LYESLMFLSWSFSILHMVPFFRNHKNDLNAITAPSAFFTQGFATSGLLTEMHQSKILVPA 107

Query: 166 -QSQWLMMHVN 195
            QSQWLMMHV+
Sbjct: 108 LQSQWLMMHVS 118


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