BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007298
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding prot...   427   e-118
gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein ...   426   e-117
gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-bind...   425   e-117
sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding pro...   423   e-116
gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum...   423   e-116

>gb|ABF17940.1| putative chloroplast chlorophyll a/b-binding protein [Carya
           cathayensis]
          Length = 267

 Score =  427 bits (1099), Expect = e-118
 Identities = 207/228 (90%), Positives = 214/228 (93%)
 Frame = -2

Query: 686 STSELLGEGRVTMRXXXXXXXXXXXXSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 507
           S+S+LLGEGRVTMR            SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWD
Sbjct: 23  SSSDLLGEGRVTMRKTAGRPKPVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 82

Query: 506 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 327
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSE
Sbjct: 83  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 142

Query: 326 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 147
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEV DP+YPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLA 202

Query: 146 DDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 3
           DDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLAD
Sbjct: 203 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 250


>gb|AAA50310.1| light-harvesting chlorophyll a/b-binding protein [Prunus persica]
          Length = 267

 Score =  426 bits (1095), Expect = e-117
 Identities = 206/228 (90%), Positives = 213/228 (93%)
 Frame = -2

Query: 686 STSELLGEGRVTMRXXXXXXXXXXXXSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 507
           S S ++GEGR+TMR            SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWD
Sbjct: 23  SVSNIVGEGRITMRKTASKSKNVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82

Query: 506 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 327
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE
Sbjct: 83  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 142

Query: 326 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 147
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGE+ DPLYPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEITDPLYPGGSFDPLGLA 202

Query: 146 DDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 3
           +DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD
Sbjct: 203 EDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 250


>gb|ABQ32304.1| chloroplast light-harvesting chlorophyll a/b-binding protein
           [Artemisia annua]
          Length = 254

 Score =  425 bits (1092), Expect = e-117
 Identities = 207/228 (90%), Positives = 213/228 (93%)
 Frame = -2

Query: 686 STSELLGEGRVTMRXXXXXXXXXXXXSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 507
           S SELLG GRV+MR            SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWD
Sbjct: 10  SNSELLGNGRVSMRKTAAPKKVAPSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 69

Query: 506 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 327
           TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSE
Sbjct: 70  TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 129

Query: 326 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 147
           GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA
Sbjct: 130 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 189

Query: 146 DDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 3
           DDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENLAD LAD
Sbjct: 190 DDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADRLAD 237


>sp|P12333.1|CB2A_SPIOL RecName: Full=Chlorophyll a-b binding protein, chloroplastic;
           AltName: Full=LHCII type I CAB; Short=LHCP; Flags:
           Precursor gi|14240|emb|CAA32526.1| chlorophyll a/b
           binding protein precursor [Spinacia oleracea]
           gi|193783447|emb|CAJ77389.3| major chlorophyll a/b
           binding protein LHCb1.3 [Spinacia oleracea]
          Length = 267

 Score =  423 bits (1088), Expect = e-116
 Identities = 203/228 (89%), Positives = 213/228 (93%)
 Frame = -2

Query: 686 STSELLGEGRVTMRXXXXXXXXXXXXSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 507
           + SE++GEGR+TMR            SPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD
Sbjct: 23  TASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 82

Query: 506 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 327
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSE
Sbjct: 83  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSE 142

Query: 326 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 147
           GGLDYLGNPSLVHAQSILAIWA QVILMGAVEGYR+AGGPLGEVVDPLYPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAVEGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202

Query: 146 DDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 3
           DDPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLAD
Sbjct: 203 DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 250


>gb|AAB61238.1| chlorophyll a/b-binding protein [Mesembryanthemum crystallinum]
          Length = 267

 Score =  423 bits (1087), Expect = e-116
 Identities = 202/228 (88%), Positives = 214/228 (93%)
 Frame = -2

Query: 686 STSELLGEGRVTMRXXXXXXXXXXXXSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 507
           +TS++LGEGR+TMR            SPWYGPDRVKYLGPFSGE+PSYLTGEFPGDYGWD
Sbjct: 23  TTSQILGEGRITMRKTAGKTKNVSSDSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWD 82

Query: 506 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGAQIFSE 327
           TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAGAQIFSE
Sbjct: 83  TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSE 142

Query: 326 GGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGGPLGEVVDPLYPGGSFDPLGLA 147
           GGLDYLGNPSLVHAQSILAIWA QVILMGA+EGYRVAGGPLGEV+DPLYPGGSFDPLGLA
Sbjct: 143 GGLDYLGNPSLVHAQSILAIWACQVILMGAIEGYRVAGGPLGEVIDPLYPGGSFDPLGLA 202

Query: 146 DDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLADHLAD 3
           +DPEAF+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP+ENLADHLAD
Sbjct: 203 EDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLAD 250