BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007295
         (2036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|2...   609   e-172
ref|XP_002522838.1| pentatricopeptide repeat-containing protein,...   590   e-166
ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containi...   537   e-150
ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containi...   503   e-140

>ref|XP_002279701.2| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial-like [Vitis vinifera]
          Length = 848

 Score =  647 bits (1668), Expect = 0.0
 Identities = 335/600 (55%), Positives = 434/600 (72%), Gaps = 8/600 (1%)
 Frame = +2

Query: 260  RLFNAISNILGGDSGTVLGLSNLPASEVSYDKKSLETDLDVPWFPNVPNTIMSHQKKEMS 439
            +L   +S+IL G S         P S+++ D+K LE  LDVPWFP + +  +S ++KE+S
Sbjct: 74   QLSQTLSSILCGGS---------PDSQLTNDEKPLEKVLDVPWFPTLSHNNISLRRKEVS 124

Query: 440  RVRKGKWVFKNTQSRRFERLVNMCGDRLGTTTALEVFGKLGRESGVKDYNAFVARRVQDA 619
            R RK KWVFKNTQ  R +RLV  C  +LGT   ++VFGKLGRE+GVK+Y A +   ++ A
Sbjct: 125  RERKQKWVFKNTQGGRLDRLVKTCAQKLGTEATIQVFGKLGRETGVKEYKALLGICIEKA 184

Query: 620  RTSQDDEDSLVHIQNAYLLIREMNEQGFQVDEKTFGSLLSYLIDMEMVEEFHFFLELIKN 799
            RTS D+E SL  I  A+ L  EM EQGF ++E+T+G    YLIDM M+EEFHFF  +I +
Sbjct: 185  RTSDDEEASLEQIYKAFQLFEEMKEQGFHIEEETYGPFFMYLIDMGMIEEFHFFHGVITD 244

Query: 800  GSHTLNPRLGYYEMLLWIRVDHEDKVQELCKSIVIDADG-------DGFQLAENYLLALC 958
             +     RLGYYEMLLW+RV++E+K+QELC  I  D DG       D   +AENY+LALC
Sbjct: 245  ENSRSLSRLGYYEMLLWVRVNNEEKIQELCNGIAAD-DGADKPNLTDTVYIAENYVLALC 303

Query: 959  EADRKKELLQLLEVVDITEVSSRDYVSNIFKSSGRLLMEEFAENLILALKASK-AAEDVS 1135
            E+ RK+ELL++LE++DIT+VSS DYV++IFKS GRL +  F E  + A KA    AE++S
Sbjct: 304  ESGRKEELLKVLEIIDITKVSSVDYVASIFKSLGRLSLASFMEKFVSAFKACDYGAEEIS 363

Query: 1136 YFITNYAISMPNLAVEDVVIKFEDMHKKLDVIPSSKSYEMLIIYGCDSLEVHSALAIIDQ 1315
             FI  YA +MPNLAVEDV++KF+D+H +L V PSS SY  L+ Y CDS +VH+AL I+DQ
Sbjct: 364  DFIFYYASNMPNLAVEDVILKFKDLHAQLVVTPSSTSYNKLVTYCCDSFKVHAALDIVDQ 423

Query: 1316 MCQLGLALSFSAVSPILHAIEESCEFDLVHPIYSVIRRHKLKPNDEAFRILIQLFVKMKD 1495
            MC+ GL LS      IL A EES EF+LVH IYSVI    L+PN E FRI+I L VKMKD
Sbjct: 424  MCEAGLTLSIEMFHSILRASEESFEFNLVHRIYSVICHQSLEPNCETFRIMINLHVKMKD 483

Query: 1496 FEGAYNMLNDLKEMNMKPTTYMYNAILGGHFREKNFCAAELVLAQMKGADVKPDCQTFSY 1675
            F+GAY++L D+K++N+ PT  +YNAI+GG+FREKN     +VL QM  ADVKPD QTF Y
Sbjct: 484  FDGAYDLLKDMKKINLTPTAGIYNAIMGGYFREKNIYGGLMVLKQMGDADVKPDSQTFCY 543

Query: 1676 LISNSEREQDIVEYYEVMQAAKVPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNM 1855
            L++N E E+DI++YYE ++ A V  TKH++MALINAY  CGQFEKAKQVVLDKG+P K++
Sbjct: 544  LLNNCECEEDIIKYYEKLKCAGVQVTKHVFMALINAYASCGQFEKAKQVVLDKGVPIKSL 603

Query: 1856 NEVKSVCVSALASCGQMSDALELYEEIKQAGCHLEPKAVISLIEHLQSEGHLNTLLELLK 2035
            NE+KSV VSALA  GQ+SDA ++YEEIK +G +LEPKA+I LIE+ QSEG L  LL+LL+
Sbjct: 604  NEIKSVLVSALALHGQISDAFDIYEEIKNSGFNLEPKAIILLIEYHQSEGDLTRLLQLLE 663


>ref|XP_002319806.1| predicted protein [Populus trichocarpa] gi|222858182|gb|EEE95729.1|
            predicted protein [Populus trichocarpa]
          Length = 784

 Score =  609 bits (1571), Expect = e-172
 Identities = 307/572 (53%), Positives = 416/572 (72%), Gaps = 1/572 (0%)
 Frame = +2

Query: 323  NLPASEVSYDKKSLETDLDVPWFPNVPNTIMSHQKKEMSRVRKGKWVFKNTQSRRFERLV 502
            N P SE + D++ ++  L++PW   + N  +   +K++SR RK KWVF  +Q     R+V
Sbjct: 27   NTPDSEEAEDEELVKKALEIPWLSRLKNNNIGMLRKDVSRERKQKWVFTYSQVNHINRIV 86

Query: 503  NMCGDRLGTTTALEVFGKLGRESGVKDYNAFVARRVQDARTSQDDEDSLVHIQNAYLLIR 682
            + C D+LGT  A+EVFGKLGRE+G+K++NA + + ++  R + D+  ++ HI     L +
Sbjct: 87   DTCADKLGTDNAMEVFGKLGRETGLKEFNALMKKYIEQCRETDDESVAMKHISAVLQLFK 146

Query: 683  EMNEQGFQVDEKTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVD 862
             M EQGF ++E+T+G  L  LID  MVEEFHFF ++IK+ + + N RLGYY+MLL+I V+
Sbjct: 147  SMKEQGFSIEEETYGPFLILLIDKGMVEEFHFFSDIIKDTNPSKNARLGYYDMLLYIGVN 206

Query: 863  HEDKVQELCKSIVIDADGDGFQLAENYLLALCEADRKKELLQLLEVVDITEVSSRDYVSN 1042
             E+K+QELC  I ID   +   L ENYLLALCE+D+K  LLQLLE +DIT+ SS D++++
Sbjct: 207  DEEKIQELCNYICIDDGDNNISLRENYLLALCESDQKNYLLQLLETMDITKFSSLDHLAS 266

Query: 1043 IFKSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAISMPNLAVEDVVIKFEDMHKK 1219
            IFKS GRL +E FA+  +L LK+    AED+S  I +YA S+PNL VEDVV KF+ +H  
Sbjct: 267  IFKSLGRLSLESFAKKFLLVLKSCDYGAEDISTLIFSYATSIPNLVVEDVVSKFKTLHMI 326

Query: 1220 LDVIPSSKSYEMLIIYGCDSLEVHSALAIIDQMCQLGLALSFSAVSPILHAIEESCEFDL 1399
            + + PSS SYE L++Y C+ L+VH AL I+DQMC+ GL +S + +  IL+A EES +F+L
Sbjct: 327  MKMSPSSTSYEKLVVYNCNLLKVHLALDIVDQMCKEGLTISINTIHSILNASEESFDFNL 386

Query: 1400 VHPIYSVIRRHKLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKPTTYMYNAILG 1579
            V  IYS+I    L PN+E FR +I L VKMKDFEGAY +L+DLK++N+ PT  MYNAI+G
Sbjct: 387  VRRIYSLIYHLDLTPNNETFRSMISLSVKMKDFEGAYGLLDDLKKLNLAPTASMYNAIMG 446

Query: 1580 GHFREKNFCAAELVLAQMKGADVKPDCQTFSYLISNSEREQDIVEYYEVMQAAKVPATKH 1759
            G+FREKN   A +VL QMK ADVKPD  ++SYLISN   E++I++YYE M+ A +  +K 
Sbjct: 447  GYFREKNIRGALMVLKQMKLADVKPDSSSYSYLISNCNNEEEIIKYYEEMKVAGIQVSKQ 506

Query: 1760 IYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALELYEEIK 1939
            I+MALINAY  CGQFEKAKQV+LDK  P K++NE++SV VSALAS GQM+DAL LYEE+K
Sbjct: 507  IFMALINAYATCGQFEKAKQVLLDKEFPIKHLNEIRSVLVSALASHGQMTDALNLYEEMK 566

Query: 1940 QAGCHLEPKAVISLIEHLQSEGHLNTLLELLK 2035
            QAG +LEPKAVISLIEH+ SEG  + LL+LL+
Sbjct: 567  QAGSNLEPKAVISLIEHVDSEGEQSRLLKLLE 598


>ref|XP_002522838.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223537922|gb|EEF39536.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 867

 Score =  590 bits (1520), Expect = e-166
 Identities = 310/588 (52%), Positives = 414/588 (70%), Gaps = 1/588 (0%)
 Frame = +2

Query: 275  ISNILGGDSGTVLGLSNLPASEVSYDKKSLETDLDVPWFPNVPNTIMSHQKKEMSRVRKG 454
            IS+ILG  S  +      P S+ +   KSLE   D+PWF N+ +  ++ Q+KE+SR RK 
Sbjct: 110  ISSILGDGSSAIA-----PDSQGTSSIKSLEIGFDIPWFQNLSHGNVNQQRKEVSRTRKQ 164

Query: 455  KWVFKNTQSRRFERLVNMCGDRLGTTTALEVFGKLGRESGVKDYNAFVARRVQDARTSQD 634
            KW+F + Q  RF++L+ M   +LG+   LE+F KLGRE+GVK+YNA +   ++ AR S D
Sbjct: 165  KWIFSSGQKTRFDQLIRMIDQKLGSEAILELFSKLGRETGVKEYNALIKILIEKARASDD 224

Query: 635  DEDSLVHIQNAYLLIREMNEQGFQVDEKTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTL 814
             + +L HI  A+  ++ M E+GF++DE+T+   L YLIDM MV EF  F E I+    + 
Sbjct: 225  KDVALKHIIVAFEFLKLMKEEGFRIDEETYSPFLMYLIDMGMVTEFGSFCEAIEENDSSS 284

Query: 815  NPRLGYYEMLLWIRVDHEDKVQELCKSIVIDADGDGFQLAENYLLALCEADRKKELLQLL 994
              RLGYYEMLL IRV++E+K++ELC  I  +   + F L ENYLLALCE DRK ELLQLL
Sbjct: 285  LARLGYYEMLLCIRVNNEEKIRELCSYIANNNLNETFDLLENYLLALCERDRKNELLQLL 344

Query: 995  EVVDITEVSSRDYVSNIFKSSGRLLMEEFAENLILALK-ASKAAEDVSYFITNYAISMPN 1171
            E+VDIT+VSS +++ +IF S GRLL+E  A+  +   K      E++S  I +YA S+PN
Sbjct: 345  EIVDITKVSSLEHMVSIFNSLGRLLLESLAKKFLSTFKECDYDTENISTLIFSYATSVPN 404

Query: 1172 LAVEDVVIKFEDMHKKLDVIPSSKSYEMLIIYGCDSLEVHSALAIIDQMCQLGLALSFSA 1351
            LAVED ++KF+++H  L++ PSSKSYE LIIY CD L+VH+AL I+DQMC+  L LS   
Sbjct: 405  LAVEDAILKFKNLHVMLEMPPSSKSYEKLIIYSCDLLKVHAALDIVDQMCKADLTLSIDV 464

Query: 1352 VSPILHAIEESCEFDLVHPIYSVIRRHKLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLK 1531
            ++ IL A EES EF+LV  IYS+I  H L PN+E FR +I+L VKMKDF GA++ML+DLK
Sbjct: 465  LNSILRACEESFEFNLVQQIYSLICHHNLTPNNETFRSMIKLRVKMKDFCGAHDMLDDLK 524

Query: 1532 EMNMKPTTYMYNAILGGHFREKNFCAAELVLAQMKGADVKPDCQTFSYLISNSEREQDIV 1711
            +  + PT  MYNAI+ G FREKN     +VL +M+ ADVKPD QT+S LI+N   E  I 
Sbjct: 525  KFKLTPTASMYNAIMAGCFREKNINGGLMVLKKMELADVKPDSQTYSNLIANCNSENQIS 584

Query: 1712 EYYEVMQAAKVPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALA 1891
            +YYE ++   +  +K I+MALINAY  CGQFEKAKQV+LDKG+P +N+ E+KS  VSALA
Sbjct: 585  KYYEELKFVGIHVSKQIFMALINAYATCGQFEKAKQVLLDKGIPIENVIEIKSALVSALA 644

Query: 1892 SCGQMSDALELYEEIKQAGCHLEPKAVISLIEHLQSEGHLNTLLELLK 2035
            S GQMSDAL +YEEIK+AG ++EPK+VI LIEH QSEG L+ LL+LL+
Sbjct: 645  SHGQMSDALVVYEEIKEAGGNMEPKSVICLIEHYQSEGELSRLLKLLE 692


>ref|XP_003539564.1| PREDICTED: pentatricopeptide repeat-containing protein At4g04790,
            mitochondrial [Glycine max]
          Length = 755

 Score =  537 bits (1383), Expect = e-150
 Identities = 282/592 (47%), Positives = 401/592 (67%), Gaps = 1/592 (0%)
 Frame = +2

Query: 263  LFNAISNILGGDSGTVLGLSNLPASEVSYDKKSLETDLDVPWFPNVPNTIMSHQKKEMSR 442
            +F  IS+I   D       +  P SE    +K  E   ++ W  +V  + +  Q KE SR
Sbjct: 63   VFKHISSIFYADKS-----AKKPDSEEIDGEKKFENMSNLSWLSSVSQSNVLLQWKEQSR 117

Query: 443  VRKGKWVFKNTQSRRFERLVNMCGDRLGTTTALEVFGKLGRESGVKDYNAFVARRVQDAR 622
             +K K VF  TQ  RF++LV +C   LG    +E+FGK+GRE  VK YN  V   +  AR
Sbjct: 118  KKKQKCVFDFTQESRFQKLVEVCARILGPEATIELFGKVGREPDVKGYNTLVEMCIDKAR 177

Query: 623  TSQDDEDSLVHIQNAYLLIREMNEQGFQVDEKTFGSLLSYLIDMEMVEEFHFFLELIKNG 802
             + D + ++  +   + L + M EQG ++ E+T+  LL YLIDM MVEEF FF  +I++ 
Sbjct: 178  GTDDKDIAIQELGKVFNLFKSMREQGLELQEQTYRPLLLYLIDMCMVEEFQFFCVVIEDE 237

Query: 803  SHTLNPRLGYYEMLLWIRVDHEDKVQELCKSIVIDADGDGFQLAENYLLALCEADRKKEL 982
            + +   RLGYYEML+W++ ++E+K+Q +C +I  +   D   + ENYLLALCE++R +E+
Sbjct: 238  NPSSVARLGYYEMLMWLKDNNEEKIQGICDNIAENKGEDTSDIQENYLLALCESERMEEI 297

Query: 983  LQLLEVVDITEVSSRDYVSNIFKSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAI 1159
            L+LLE++DI  +SS + V+ +F++ GRLL+E  AE  +L  K S   A++++ FI +YA+
Sbjct: 298  LKLLEIIDIKNLSSAESVAKVFQALGRLLLEPVAEKFLLDFKTSDHEADNITDFIASYAV 357

Query: 1160 SMPNLAVEDVVIKFEDMHKKLDVIPSSKSYEMLIIYGCDSLEVHSALAIIDQMCQLGLAL 1339
            S+P+L+V+DV+ KF+D+H++L+V PSS SYE LI++ C  L+VH AL I+D+MC+ GL L
Sbjct: 358  SIPDLSVKDVIKKFKDLHQRLEVSPSSSSYEKLILHSCALLKVHVALDIVDEMCEAGLTL 417

Query: 1340 SFSAVSPILHAIEESCEFDLVHPIYSVIRRHKLKPNDEAFRILIQLFVKMKDFEGAYNML 1519
            S   +  IL   +++ E++LVH I+S I R+ L+ NDE FR +I LF+KMKD EGAY ML
Sbjct: 418  STKVLHSILQICDDTSEYNLVHRIFSTIHRYNLESNDETFRSMIDLFLKMKDIEGAYKML 477

Query: 1520 NDLKEMNMKPTTYMYNAILGGHFREKNFCAAELVLAQMKGADVKPDCQTFSYLISNSERE 1699
            +DL ++N+KP+  MYNAIL   FREKN      VL  M+ ADVKPD QTFSYLISNSE E
Sbjct: 478  DDLGKLNLKPSPGMYNAILEECFREKNISDGVRVLEHMQCADVKPDSQTFSYLISNSETE 537

Query: 1700 QDIVEYYEVMQAAKVPATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCV 1879
            +DIV+YYE ++ + + ATK I+MAL+NAY  CGQ EKAK+V+LD  +P K++N++K   V
Sbjct: 538  EDIVKYYEELKQSGIVATKQIFMALVNAYAACGQLEKAKKVILDPLIPPKSLNQIKGFLV 597

Query: 1880 SALASCGQMSDALELYEEIKQAGCHLEPKAVISLIEHLQSEGHLNTLLELLK 2035
            S LAS G++S+AL +YEEIKQ+G  LE K V SLIEH  SEG L+ LL LLK
Sbjct: 598  SVLASHGKLSEALVIYEEIKQSGHKLEAKEVTSLIEHTHSEGELDRLLLLLK 649


>ref|XP_003541878.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21880,
            mitochondrial-like [Glycine max]
          Length = 705

 Score =  503 bits (1295), Expect = e-140
 Identities = 268/577 (46%), Positives = 383/577 (66%), Gaps = 8/577 (1%)
 Frame = +2

Query: 329  PASEVSYDKKSLETDLDVPWFPNVPNTIMSHQKKEMSRVRKGKWVFKNTQSRRFERLVNM 508
            P SE     K  E   ++ W  +V    +  Q+KE SR +K K VF  TQ  RF++L+ +
Sbjct: 36   PDSEEIDGAKKFEEMSNLSWLSSVSQNNILLQRKEQSRKKKQKCVFDFTQESRFQKLIEV 95

Query: 509  CGDRLGTTTALEVFGKLGRESGVKDYNAFVARRVQDARTSQDDEDSLVHIQNAYLLIREM 688
            C   LG    +E+FGK+GRE GVK YN  V   +  AR + D++ ++  +   + L +  
Sbjct: 96   CARILGPEATIELFGKVGREPGVKGYNTLVEMCIDKARGTDDEDITIEELGKVFNLFKST 155

Query: 689  NEQGFQVDEKTFGSLLSYLIDMEMVEEFHFFLELIKNGSHTLNPRLGYYEMLLWIRVDHE 868
             EQG ++ E+T+  LL YLIDM MVEEF FF  +IK+ + +   RLGYYEMLLW++ ++E
Sbjct: 156  REQGLELQEQTYRLLLLYLIDMRMVEEFKFFCVVIKDENPSSVTRLGYYEMLLWLKDNNE 215

Query: 869  DKVQELCKSIVIDADGDGFQLAENYLLALCEADRKKELLQLLEVVDITEVSSRDYVSNIF 1048
            +K+Q +C  I  + D D   +        CE++R KE+L+LLE++DI  +SS + V+ +F
Sbjct: 216  EKIQGICDYIA-ENDEDTSDI--------CESERMKEILKLLEIIDIKNLSSAESVAKVF 266

Query: 1049 KSSGRLLMEEFAENLILALKASK-AAEDVSYFITNYAISMPNLA-------VEDVVIKFE 1204
            ++ GRLL+E  AE  +L  K S   A++++ FI +YA+S+P+L+       VEDV+ KF+
Sbjct: 267  QALGRLLLEPLAEKFLLDFKTSDHEADNITNFIASYAVSIPDLSIRNISQMVEDVIKKFK 326

Query: 1205 DMHKKLDVIPSSKSYEMLIIYGCDSLEVHSALAIIDQMCQLGLALSFSAVSPILHAIEES 1384
            D+H++L+V PSS SYE LI++ C  LEVH AL I+D+MC+ GL LS  A+  IL   +++
Sbjct: 327  DLHQRLEVSPSSSSYEKLILHSCALLEVHVALDIVDEMCEAGLTLSTKALHSILQICDDT 386

Query: 1385 CEFDLVHPIYSVIRRHKLKPNDEAFRILIQLFVKMKDFEGAYNMLNDLKEMNMKPTTYMY 1564
             E++LVH I+S IR + L+ +DE FR +I  F+KMKD EGAY ML+DL+E+N+K T  MY
Sbjct: 387  SEYNLVHRIFSTIRHYNLESDDETFRSMIDFFLKMKDIEGAYKMLDDLEELNLKLTPGMY 446

Query: 1565 NAILGGHFREKNFCAAELVLAQMKGADVKPDCQTFSYLISNSEREQDIVEYYEVMQAAKV 1744
            NAI+   F+EKN      VL  M+ ADVKPD QTFS LISNSE ++DI +YYE ++ + +
Sbjct: 447  NAIMAECFQEKNISDGVRVLEHMQCADVKPDSQTFSCLISNSETKEDIAKYYEELKQSGI 506

Query: 1745 PATKHIYMALINAYVKCGQFEKAKQVVLDKGLPAKNMNEVKSVCVSALASCGQMSDALEL 1924
             ATK I+MALINAY  CGQ EKAK+V+LD  +P K++N++K   VS LAS GQ+S AL +
Sbjct: 507  VATKQIFMALINAYAACGQLEKAKKVILDPLIPPKSLNQIKGFLVSVLASHGQLSGALVI 566

Query: 1925 YEEIKQAGCHLEPKAVISLIEHLQSEGHLNTLLELLK 2035
            Y++IKQ+G  LE K + SLIEH  SEG L+ LL LL+
Sbjct: 567  YDKIKQSGHKLEAKEITSLIEHTHSEGELDRLLLLLE 603