BLASTX nr result

ID: Coptis23_contig00007294 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007294
         (1036 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein ...   198   2e-48
ref|XP_002863905.1| histidine triad family protein [Arabidopsis ...   197   3e-48
gb|ABK95845.1| unknown [Populus trichocarpa]                          195   1e-47
ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [A...   193   5e-47
ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|2...   193   5e-47

>ref|XP_004146949.1| PREDICTED: uncharacterized HIT-like protein Rv1262c/MT1300-like
           [Cucumis sativus] gi|449526732|ref|XP_004170367.1|
           PREDICTED: uncharacterized HIT-like protein
           Rv1262c/MT1300-like [Cucumis sativus]
          Length = 208

 Score =  198 bits (503), Expect = 2e-48
 Identities = 106/207 (51%), Positives = 138/207 (66%), Gaps = 10/207 (4%)
 Frame = -2

Query: 849 MEAGRRISVLCSHLVPVD----KELFSGISMSSCAANDGQ------CMKGSEEKDCVFCK 700
           MEA RR+++LCSHL PV+          +S SSCA+            KGS + DCVFCK
Sbjct: 1   MEA-RRLAILCSHLCPVNLGSSPAPLLNLSSSSCASGSKSEHLIYDSQKGSLQDDCVFCK 59

Query: 699 IIRGELPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFL 520
           IIRGE P+FK+++DD C+CILD  PLS+GH+L+IPK H+SSL+ TPPSV+A+MCSK+P +
Sbjct: 60  IIRGEAPAFKLYDDDSCLCILDTKPLSNGHALIIPKSHYSSLEATPPSVIAAMCSKVPII 119

Query: 519 SSAIMKATNCDSFXXXXXXXXXXGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGET 340
           S+AIMK+T  DSF          GQVIFHTH+HIIPRK  D LW SE+  R+ LK   E 
Sbjct: 120 SNAIMKSTGSDSFNLLVNNGVAAGQVIFHTHIHIIPRKARDCLWASESLERRTLKFDEEA 179

Query: 339 DELAGSIRKQLSMNTSHEDDEDVNTSH 259
             LA SI++ L  + + E+D  V  S+
Sbjct: 180 SRLAKSIQEIL--HCTKENDSKVQESN 204


>ref|XP_002863905.1| histidine triad family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309740|gb|EFH40164.1| histidine triad family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 198

 Score =  197 bits (502), Expect = 3e-48
 Identities = 101/187 (54%), Positives = 128/187 (68%), Gaps = 6/187 (3%)
 Frame = -2

Query: 849 MEAGRRISVLCSHLVPV------DKELFSGISMSSCAANDGQCMKGSEEKDCVFCKIIRG 688
           MEA RR+++LCSHL P       D  L      SS ++ DG+    + + DCVFCKIIRG
Sbjct: 1   MEA-RRLAILCSHLNPPGPNPTRDPILRVSDCSSSASSGDGKVESSNLQNDCVFCKIIRG 59

Query: 687 ELPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAI 508
           E P  K++EDD+C+CILD NPLSHGHSL+IPK H+ +L+ TPPSVVA+MCSK+P +S+AI
Sbjct: 60  ESPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAI 119

Query: 507 MKATNCDSFXXXXXXXXXXGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELA 328
           +KAT  DSF          GQVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L 
Sbjct: 120 VKATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHTLKLDKEASQLV 179

Query: 327 GSIRKQL 307
             +R+QL
Sbjct: 180 SRVRQQL 186


>gb|ABK95845.1| unknown [Populus trichocarpa]
          Length = 197

 Score =  195 bits (496), Expect = 1e-47
 Identities = 99/195 (50%), Positives = 131/195 (67%), Gaps = 3/195 (1%)
 Frame = -2

Query: 849 MEAGRRISVLCSHLVPVDKELFSGISMS---SCAANDGQCMKGSEEKDCVFCKIIRGELP 679
           ME+  R+S++CSHL+P      S +S S   S + ND      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPPSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 678 SFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 499
           +FK++ED+ C+CILD +PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 498 TNCDSFXXXXXXXXXXGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 319
              DSF          GQVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 318 RKQLSMNTSHEDDED 274
           R+QLS + S ED +D
Sbjct: 181 REQLS-SISPEDGKD 194


>ref|NP_974907.1| protein histidine triad nucleotide-binding 3 [Arabidopsis thaliana]
           gi|332008302|gb|AED95685.1| protein histidine triad
           nucleotide-binding 3 [Arabidopsis thaliana]
          Length = 197

 Score =  193 bits (491), Expect = 5e-47
 Identities = 98/186 (52%), Positives = 127/186 (68%), Gaps = 5/186 (2%)
 Frame = -2

Query: 849 MEAGRRISVLCSHLVPVDKELFSGISM-----SSCAANDGQCMKGSEEKDCVFCKIIRGE 685
           MEA RR+++LCSHL P         ++     SS ++ DG+    + + DCVFCKIIRGE
Sbjct: 1   MEA-RRLAILCSHLNPPGPNPTRDPTLRVSDCSSGSSGDGKVESSTLQNDCVFCKIIRGE 59

Query: 684 LPSFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIM 505
            P  K++EDD+C+CILD NPLSHGHSL+IPK H+ +L+ TPPSVVA+MCSK+P +S+AI+
Sbjct: 60  SPCLKLYEDDMCLCILDTNPLSHGHSLIIPKLHYPTLEETPPSVVAAMCSKVPLISNAIV 119

Query: 504 KATNCDSFXXXXXXXXXXGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAG 325
           KAT  DSF          GQVIFHTH+HIIPRK+ D LW SE+  R  LKL  E  +L  
Sbjct: 120 KATGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKERDCLWASESLRRHSLKLDKEASQLVS 179

Query: 324 SIRKQL 307
            +R+ L
Sbjct: 180 CVRRHL 185


>ref|XP_002303075.1| predicted protein [Populus trichocarpa] gi|222844801|gb|EEE82348.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  193 bits (491), Expect = 5e-47
 Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 3/185 (1%)
 Frame = -2

Query: 849 MEAGRRISVLCSHLVPVDKELFSGISMS---SCAANDGQCMKGSEEKDCVFCKIIRGELP 679
           ME+  R+S++CSHL+P      S +S S   S + ND      + + DCVFC+I+RGE P
Sbjct: 1   MESRSRLSIICSHLLPGSPSPTSRLSSSITSSASINDAAGDTRNHQLDCVFCRIVRGESP 60

Query: 678 SFKVHEDDVCICILDLNPLSHGHSLLIPKCHFSSLKCTPPSVVASMCSKIPFLSSAIMKA 499
           +FK++ED+ C+CILD +PLS GHSL+IPK HFS L+ TPPSVVA+MCSK+P + +AIMKA
Sbjct: 61  AFKLYEDETCLCILDSSPLSPGHSLIIPKSHFSCLEATPPSVVAAMCSKVPSIGNAIMKA 120

Query: 498 TNCDSFXXXXXXXXXXGQVIFHTHLHIIPRKDHDRLWNSETFSRQPLKLSGETDELAGSI 319
              DSF          GQVIFHTH+HIIPRK  D LW +E+  R+PL    E  +L   +
Sbjct: 121 NGSDSFNLLVNNGAAAGQVIFHTHIHIIPRKARDCLWTTESLRRRPLNFDQEASQLVNRV 180

Query: 318 RKQLS 304
           R+QLS
Sbjct: 181 REQLS 185


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