BLASTX nr result

ID: Coptis23_contig00007286 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007286
         (220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putat...    66   3e-09
emb|CBI39086.3| unnamed protein product [Vitis vinifera]               63   3e-08
ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    63   3e-08
ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|2...    63   3e-08

>ref|XP_002322753.1| predicted protein [Populus trichocarpa] gi|222867383|gb|EEF04514.1|
           predicted protein [Populus trichocarpa]
          Length = 1117

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/45 (77%), Positives = 38/45 (84%)
 Frame = +3

Query: 84  LQQEDEEMLVPNSDLVVEGPQPMEVAVQVEAANTVENNQPIEDPP 218
           L QEDEEMLVP+SDLV EGPQPMEV  QVE  +TVE NQP+EDPP
Sbjct: 9   LDQEDEEMLVPHSDLV-EGPQPMEVVAQVEQTSTVE-NQPVEDPP 51


>ref|XP_002524120.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223536688|gb|EEF38330.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 1120

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 37/45 (82%), Positives = 40/45 (88%)
 Frame = +3

Query: 84  LQQEDEEMLVPNSDLVVEGPQPMEVAVQVEAANTVENNQPIEDPP 218
           L QEDEEMLVP+SDL VEGPQPMEVA QVE A+TVE NQP+EDPP
Sbjct: 9   LDQEDEEMLVPHSDL-VEGPQPMEVA-QVEPASTVE-NQPVEDPP 50


>emb|CBI39086.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +3

Query: 87  QQEDEEMLVPNSDLVVEGPQPMEVAVQVEAANTVENNQPIEDP 215
           QQEDEEMLVP+SDLV EGPQPMEV  Q +A++ VE NQP+EDP
Sbjct: 11  QQEDEEMLVPHSDLV-EGPQPMEVVAQADASSAVE-NQPVEDP 51


>ref|XP_002267555.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
           vinifera]
          Length = 1117

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +3

Query: 87  QQEDEEMLVPNSDLVVEGPQPMEVAVQVEAANTVENNQPIEDP 215
           QQEDEEMLVP+SDLV EGPQPMEV  Q +A++ VE NQP+EDP
Sbjct: 11  QQEDEEMLVPHSDLV-EGPQPMEVVAQADASSAVE-NQPVEDP 51


>ref|XP_002309275.1| predicted protein [Populus trichocarpa] gi|222855251|gb|EEE92798.1|
           predicted protein [Populus trichocarpa]
          Length = 1239

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/45 (77%), Positives = 39/45 (86%)
 Frame = +3

Query: 84  LQQEDEEMLVPNSDLVVEGPQPMEVAVQVEAANTVENNQPIEDPP 218
           L QEDEEMLVP+SDL VEGPQP+EVA QVE  +TVE NQP+EDPP
Sbjct: 9   LDQEDEEMLVPHSDL-VEGPQPIEVA-QVEQTSTVE-NQPVEDPP 50


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