BLASTX nr result

ID: Coptis23_contig00007265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007265
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529315.1| DNA binding protein, putative [Ricinus commu...   261   5e-67
gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|...   254   5e-65
gb|ADY38789.1| DNA-binding protein [Coffea arabica]                   252   2e-64
emb|CBI35166.3| unnamed protein product [Vitis vinifera]              251   4e-64
ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCA...   250   7e-64

>ref|XP_002529315.1| DNA binding protein, putative [Ricinus communis]
            gi|223531239|gb|EEF33084.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 301

 Score =  261 bits (666), Expect = 5e-67
 Identities = 153/290 (52%), Positives = 169/290 (58%), Gaps = 1/290 (0%)
 Frame = +2

Query: 596  MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMXXXXXXXXXXXXXXXXXXXXXPKE 775
            +ANPWWTGQ+GL G++P +  SP+  K  R     +                     PKE
Sbjct: 19   LANPWWTGQIGLAGLDPAS-NSPSLNKANR----EISINDNSNSRGEDDDDRDTGDEPKE 73

Query: 776  GAVEIXXXXXXXXXXXXXXXXXXXIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 955
            GAVE+                   IFVTRDSPNALRSHVME+V G DVAE VAQFARRRQ
Sbjct: 74   GAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVVGGADVAECVAQFARRRQ 133

Query: 956  RGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLAX 1135
            RGVCVLSGSG VANVTLRQP+AP AVVAL GRFEILSLTG+FLPGPAPPGSTGLTVYLA 
Sbjct: 134  RGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAG 193

Query: 1136 XXXXXXXXXXXXTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXXX 1315
                        +LIAAGPV+VIAATFANATYERLP+                       
Sbjct: 194  GQGQVVGGSVVGSLIAAGPVMVIAATFANATYERLPL--EDDEEAASAGQGHIQGGSNNS 251

Query: 1316 XXXXXXXXXXXXXXXXXXXXVYNNLPPNLIPN-GQLSQEAYGWAHGRSPF 1462
                                VY NLPPNLIPN GQL  +AY WAHGR P+
Sbjct: 252  PPPIGSTGQQPGLPDPSALPVY-NLPPNLIPNGGQLGHDAYAWAHGRPPY 300


>gb|ABZ89182.1| putative protein [Coffea canephora] gi|326367382|gb|ADZ55300.1|
            DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  254 bits (649), Expect = 5e-65
 Identities = 147/293 (50%), Positives = 172/293 (58%), Gaps = 4/293 (1%)
 Frame = +2

Query: 596  MANPWWTGQVGLPGVEPGTA-GSPAFRKRERGEL--SSMXXXXXXXXXXXXXXXXXXXXX 766
            MAN WWTGQVGLPGVE  ++ GSP  +K + G     +                      
Sbjct: 1    MANRWWTGQVGLPGVETSSSTGSPVLKKPDLGISMNDNSGSGGGSGGRDDEDERENSTDE 60

Query: 767  PKEGAVEIXXXXXXXXXXXXXXXXXXXIFVTRDSPNALRSHVMEIVSGTDVAESVAQFAR 946
            PKEGAVE+                   IFVTRDSPNALRSHVME+ +G+D+AES+AQFAR
Sbjct: 61   PKEGAVEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFAR 120

Query: 947  RRQRGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVY 1126
            RRQRGVCVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+Y
Sbjct: 121  RRQRGVCVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIY 180

Query: 1127 LAXXXXXXXXXXXXXTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXX 1306
            LA             +L+A+GPV+VIA+TF+NATYERLPI                    
Sbjct: 181  LAGGQGQVVGGSVVGSLVASGPVMVIASTFSNATYERLPI---EEDEEGGGAAQGQLGGN 237

Query: 1307 XXXXXXXXXXXXXXXXXXXXXXXVYNNLPPNLIPN-GQLSQEAYGWAHGRSPF 1462
                                   VY NLPPNL+PN GQL+ EA+ WAHGR P+
Sbjct: 238  GSPPLGSGGAPQQGGLGDPSSMPVY-NLPPNLMPNGGQLNHEAFAWAHGRPPY 289


>gb|ADY38789.1| DNA-binding protein [Coffea arabica]
          Length = 289

 Score =  252 bits (644), Expect = 2e-64
 Identities = 146/293 (49%), Positives = 172/293 (58%), Gaps = 4/293 (1%)
 Frame = +2

Query: 596  MANPWWTGQVGLPGVEPGTA-GSPAFRKRERGEL--SSMXXXXXXXXXXXXXXXXXXXXX 766
            MAN WWTGQVGLPGVE  ++ GSP  +K + G     +                      
Sbjct: 1    MANRWWTGQVGLPGVETSSSTGSPVLKKPDLGISMNDNSGSGGGSGGRDDEDERENSTDE 60

Query: 767  PKEGAVEIXXXXXXXXXXXXXXXXXXXIFVTRDSPNALRSHVMEIVSGTDVAESVAQFAR 946
            PKEGAVE+                   IFVTRDSPNALRSHVME+ +G+D+AES+AQFAR
Sbjct: 61   PKEGAVEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDIAESIAQFAR 120

Query: 947  RRQRGVCVLSGSGVVANVTLRQPSAPSAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVY 1126
            RRQRGVCVLS SG V NVTLRQPSAP AV+AL GRFEILSLTG+FLPGPAPPG+TGLT+Y
Sbjct: 121  RRQRGVCVLSASGTVTNVTLRQPSAPGAVMALHGRFEILSLTGAFLPGPAPPGATGLTIY 180

Query: 1127 LAXXXXXXXXXXXXXTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXX 1306
            LA             +L+A+GPV+VIA+TF+NATYERLPI                    
Sbjct: 181  LAGGQGQVVGGSVVGSLVASGPVMVIASTFSNATYERLPI---EEDEEGGGAAQGQLGGN 237

Query: 1307 XXXXXXXXXXXXXXXXXXXXXXXVYNNLPPNLIPN-GQLSQEAYGWAHGRSPF 1462
                                   VY +LPPNL+PN GQL+ EA+ WAHGR P+
Sbjct: 238  GSPPLGSGGAPQQGGLGDPSSMPVY-SLPPNLMPNGGQLNHEAFAWAHGRPPY 289


>emb|CBI35166.3| unnamed protein product [Vitis vinifera]
          Length = 275

 Score =  251 bits (641), Expect = 4e-64
 Identities = 146/291 (50%), Positives = 170/291 (58%), Gaps = 2/291 (0%)
 Frame = +2

Query: 596  MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMXXXXXXXXXXXXXXXXXXXXXPKE 775
            MAN WW GQVGL GV+  +A SPA +K + G   +                      P+E
Sbjct: 1    MANRWWAGQVGLQGVDTSSA-SPAMKKPDLGISMNENGGSGSGGGGEEEEEKENSDEPRE 59

Query: 776  GAVEIXXXXXXXXXXXXXXXXXXXIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 955
            GA+E+                   IFVTRDSPNALRSHVME+ +G+D+ ES+AQFARRRQ
Sbjct: 60   GAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDITESIAQFARRRQ 119

Query: 956  RGVCVLSGSGVVANVTLRQPSAP-SAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLA 1132
            RGVCVLS SG V NVTLRQPSAP  AV+AL GRFEILSLTG+FLPGPAPPGSTGLT+YLA
Sbjct: 120  RGVCVLSASGTVMNVTLRQPSAPGGAVMALHGRFEILSLTGAFLPGPAPPGSTGLTIYLA 179

Query: 1133 XXXXXXXXXXXXXTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXX 1312
                         +LIAAGPV+VIAATF+NATYERLP+                      
Sbjct: 180  GGQAQVVGGSVVGSLIAAGPVMVIAATFSNATYERLPL--------------EDEEEAGS 225

Query: 1313 XXXXXXXXXXXXXXXXXXXXXVYNNLPPNLIPN-GQLSQEAYGWAHGRSPF 1462
                                 VY NLPPNL+PN GQL+ +AYGWAHGR P+
Sbjct: 226  AAQEQLAGGGGGGMADPSSMPVY-NLPPNLLPNGGQLNHDAYGWAHGRQPY 275


>ref|XP_002271606.1| PREDICTED: putative DNA-binding protein ESCAROLA [Vitis vinifera]
          Length = 291

 Score =  250 bits (639), Expect = 7e-64
 Identities = 144/292 (49%), Positives = 169/292 (57%), Gaps = 3/292 (1%)
 Frame = +2

Query: 596  MANPWWTGQVGLPGVEPGTAGSPAFRKRERGELSSMXXXXXXXXXXXXXXXXXXXXXPKE 775
            MAN WW GQVGL GV+  +A SPA +K + G   +                      P+E
Sbjct: 1    MANRWWAGQVGLQGVDTSSA-SPAMKKPDLGISMNENGGSGSGGGGEEEEEKENSDEPRE 59

Query: 776  GAVEIXXXXXXXXXXXXXXXXXXXIFVTRDSPNALRSHVMEIVSGTDVAESVAQFARRRQ 955
            GA+E+                   IFVTRDSPNALRSHVME+ +G+D+ ES+AQFARRRQ
Sbjct: 60   GAIEVATRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVANGSDITESIAQFARRRQ 119

Query: 956  RGVCVLSGSGVVANVTLRQPSAP-SAVVALQGRFEILSLTGSFLPGPAPPGSTGLTVYLA 1132
            RGVCVLS SG V NVTLRQPSAP  AV+AL GRFEILSLTG+FLPGPAPPGSTGLT+YLA
Sbjct: 120  RGVCVLSASGTVMNVTLRQPSAPGGAVMALHGRFEILSLTGAFLPGPAPPGSTGLTIYLA 179

Query: 1133 XXXXXXXXXXXXXTLIAAGPVIVIAATFANATYERLPIXXXXXXXXXXXXXXXXXXXXXX 1312
                         +LIAAGPV+VIAATF+NATYERLP+                      
Sbjct: 180  GGQAQVVGGSVVGSLIAAGPVMVIAATFSNATYERLPLEDEEEAGSAAQEQLAGGGGGGG 239

Query: 1313 XXXXXXXXXXXXXXXXXXXXXV-YNNLPPNLIPN-GQLSQEAYGWAHGRSPF 1462
                                 +   NLPPNL+PN GQL+ +AYGWAHGR P+
Sbjct: 240  SPPGIGGSGGQQQAGMADPSSMPVYNLPPNLLPNGGQLNHDAYGWAHGRQPY 291


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