BLASTX nr result

ID: Coptis23_contig00007264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007264
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23955.3| unnamed protein product [Vitis vinifera]              440   e-121
ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vit...   437   e-120
ref|XP_002522999.1| protein with unknown function [Ricinus commu...   423   e-116
gb|ABB02409.1| chloroplast lipocalin [Ipomoea nil]                    413   e-113
ref|XP_002319293.1| predicted protein [Populus trichocarpa] gi|1...   409   e-112

>emb|CBI23955.3| unnamed protein product [Vitis vinifera]
          Length = 347

 Score =  440 bits (1131), Expect = e-121
 Identities = 227/337 (67%), Positives = 253/337 (75%)
 Frame = -3

Query: 1128 HKLSRTF*KVMLLIQASPLSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSL 949
            H  + T  +V+LL  +S      P+R     +   CS +H  +SSK VAR VLSGLA S+
Sbjct: 16   HLQTTTSSRVVLLQSSSS----PPIRRGMPSKLMLCSFEH-PTSSKAVARNVLSGLAASV 70

Query: 948  IFISRANQVIAAELYHHLNLCQLAAVTDNSSTLKLDNGSDERSGKLMMMRGMSAKNFDPI 769
            + +S+ANQVIA  L H  NLCQLA+ T N+ TL LD GS ERSGKLMMMRGMSAK+FDP+
Sbjct: 71   VILSQANQVIAEGLSHPNNLCQLASATSNTITLPLDEGSGERSGKLMMMRGMSAKDFDPV 130

Query: 768  RYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGSDGYITGIRG 589
            RYSGRWFEVASLKRGFAGQGQEDCHCTQGVYT+D ++ +IQVDTFCVHGG DGYITGIRG
Sbjct: 131  RYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMESPAIQVDTFCVHGGPDGYITGIRG 190

Query: 588  NVQCLSXXXXXXXXXXXXXXEMIREKCYLRFPTLPFIPKLPYDVIATDYDNFALVSGAKD 409
             VQCL                MIREKCYLRFPTLPFIPK PYDVIATDYD FALVSGAKD
Sbjct: 191  KVQCLEEEELEKSATDLEKQVMIREKCYLRFPTLPFIPKEPYDVIATDYDTFALVSGAKD 250

Query: 408  MGFIQVYSRNPVPGHAFIEKYKSYLENFGYDSSKIKDTPQDCEVMTNSKLXXXXXXXXXX 229
              FIQ+YSR P PG  FIEKYK+YL NFGYD SKIKDTPQDCEVM+NSKL          
Sbjct: 251  RSFIQIYSRTPNPGPKFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQ 310

Query: 228  XALTNQFPNLELNSSVQFNPFTSVFDTLKKLVPLYFK 118
             ALTNQFP+L L S ++FNPFTSVFDTLKKLV LYFK
Sbjct: 311  QALTNQFPDLGLKSPIEFNPFTSVFDTLKKLVELYFK 347


>ref|XP_002281469.2| PREDICTED: F-box protein At3g62230-like [Vitis vinifera]
          Length = 730

 Score =  437 bits (1124), Expect = e-120
 Identities = 219/302 (72%), Positives = 239/302 (79%)
 Frame = -3

Query: 1023 CSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELYHHLNLCQLAAVTDNSSTLKL 844
            CS +H  +SSK VAR VLSGLA S++ +S+ANQVIA  L H  NLCQLA+ T N+ TL L
Sbjct: 430  CSFEH-PTSSKAVARNVLSGLAASVVILSQANQVIAEGLSHPNNLCQLASATSNTITLPL 488

Query: 843  DNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTYDA 664
            D GS ERSGKLMMMRGMSAK+FDP+RYSGRWFEVASLKRGFAGQGQEDCHCTQGVYT+D 
Sbjct: 489  DEGSGERSGKLMMMRGMSAKDFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDM 548

Query: 663  DASSIQVDTFCVHGGSDGYITGIRGNVQCLSXXXXXXXXXXXXXXEMIREKCYLRFPTLP 484
            ++ +IQVDTFCVHGG DGYITGIRG VQCL                MIREKCYLRFPTLP
Sbjct: 549  ESPAIQVDTFCVHGGPDGYITGIRGKVQCLEEEELEKSATDLEKQVMIREKCYLRFPTLP 608

Query: 483  FIPKLPYDVIATDYDNFALVSGAKDMGFIQVYSRNPVPGHAFIEKYKSYLENFGYDSSKI 304
            FIPK PYDVIATDYD FALVSGAKD  FIQ+YSR P PG  FIEKYK+YL NFGYD SKI
Sbjct: 609  FIPKEPYDVIATDYDTFALVSGAKDRSFIQIYSRTPNPGPKFIEKYKAYLANFGYDPSKI 668

Query: 303  KDTPQDCEVMTNSKLXXXXXXXXXXXALTNQFPNLELNSSVQFNPFTSVFDTLKKLVPLY 124
            KDTPQDCEVM+NSKL           ALTNQFP+L L S ++FNPFTSVFDTLKKLV LY
Sbjct: 669  KDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDLGLKSPIEFNPFTSVFDTLKKLVELY 728

Query: 123  FK 118
            FK
Sbjct: 729  FK 730


>ref|XP_002522999.1| protein with unknown function [Ricinus communis]
            gi|223537811|gb|EEF39429.1| protein with unknown function
            [Ricinus communis]
          Length = 341

 Score =  423 bits (1088), Expect = e-116
 Identities = 214/320 (66%), Positives = 245/320 (76%), Gaps = 2/320 (0%)
 Frame = -3

Query: 1071 SFPAPL--RGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELYHH 898
            S P PL  RG A     +CSL++  SS  VV RR+LSGLA SLIF+S+ N+V+A ++ H 
Sbjct: 23   SSPPPLIPRGAAGKVVLKCSLENPVSSKGVV-RRLLSGLAASLIFLSQTNKVVALDVSHS 81

Query: 897  LNLCQLAAVTDNSSTLKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKRGFA 718
             N+CQLA+  DN  TL L+  S+++SG +M MRGM+AK+FDP+RYSGRWFEVASLKRGFA
Sbjct: 82   HNICQLASAVDNKVTLPLEVRSNDKSGNVMRMRGMTAKDFDPVRYSGRWFEVASLKRGFA 141

Query: 717  GQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGSDGYITGIRGNVQCLSXXXXXXXXXXX 538
            GQGQEDCHCTQGVYTYD    +IQVDTFCVHG  DGYITGIRG VQCLS           
Sbjct: 142  GQGQEDCHCTQGVYTYDMQTPAIQVDTFCVHGSPDGYITGIRGRVQCLSEEDLEKKETEL 201

Query: 537  XXXEMIREKCYLRFPTLPFIPKLPYDVIATDYDNFALVSGAKDMGFIQVYSRNPVPGHAF 358
               EMI+EKCYLRFPTLPFIPK PYDVIATDYDNF+LVSGAKD  FIQ+YSR P PG  F
Sbjct: 202  EKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFSLVSGAKDKSFIQIYSRRPDPGPEF 261

Query: 357  IEKYKSYLENFGYDSSKIKDTPQDCEVMTNSKLXXXXXXXXXXXALTNQFPNLELNSSVQ 178
            IEKYK+YL NFGYD SKIKDTPQDCEVM+NSKL           ALTNQFP+LEL + ++
Sbjct: 262  IEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMSGMQQALTNQFPDLELKAPIE 321

Query: 177  FNPFTSVFDTLKKLVPLYFK 118
            FNPFTSVFDT KKL+ LYFK
Sbjct: 322  FNPFTSVFDTFKKLLELYFK 341


>gb|ABB02409.1| chloroplast lipocalin [Ipomoea nil]
          Length = 334

 Score =  413 bits (1061), Expect = e-113
 Identities = 206/320 (64%), Positives = 241/320 (75%)
 Frame = -3

Query: 1077 PLSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELYHH 898
            P   P+  RG +     RC+L+  A S K  A+ ++SGLA S++F+++ N V+AA+L + 
Sbjct: 17   PSHHPSKPRGVSGKMIVRCTLEQTAPS-KARAKHLVSGLAASIVFLTQVNSVVAADLSYQ 75

Query: 897  LNLCQLAAVTDNSSTLKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKRGFA 718
             N+CQLA+  DN  +L LD G D+  G LMMMRGM+AKNFDP RY+GRWFEVASLKRGFA
Sbjct: 76   NNICQLASAADNLPSLPLDGG-DDNGGMLMMMRGMTAKNFDPTRYAGRWFEVASLKRGFA 134

Query: 717  GQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGSDGYITGIRGNVQCLSXXXXXXXXXXX 538
            GQGQEDCHCTQG+YT+D +A++IQVDTFCVHGG DGYITGIRG VQCLS           
Sbjct: 135  GQGQEDCHCTQGIYTFDVNAAAIQVDTFCVHGGPDGYITGIRGKVQCLSEDETLKTATDL 194

Query: 537  XXXEMIREKCYLRFPTLPFIPKLPYDVIATDYDNFALVSGAKDMGFIQVYSRNPVPGHAF 358
               EMI+ KCYLRFPTLPFIPK PYDVIATDYDNFA+VSGAKD  F+Q+YSR P PG  F
Sbjct: 195  EKQEMIKGKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDKSFVQIYSRTPDPGPEF 254

Query: 357  IEKYKSYLENFGYDSSKIKDTPQDCEVMTNSKLXXXXXXXXXXXALTNQFPNLELNSSVQ 178
            IEKYK+YL +FGYD SKIKDTPQDCEVM+NS+L           AL NQFP LEL + V 
Sbjct: 255  IEKYKAYLADFGYDPSKIKDTPQDCEVMSNSQLSAMMSMAGMQQALNNQFPELELKAPVA 314

Query: 177  FNPFTSVFDTLKKLVPLYFK 118
            FNPFTSVFDTLKKLV LYFK
Sbjct: 315  FNPFTSVFDTLKKLVELYFK 334


>ref|XP_002319293.1| predicted protein [Populus trichocarpa] gi|118489963|gb|ABK96778.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222857669|gb|EEE95216.1| predicted protein [Populus
            trichocarpa]
          Length = 342

 Score =  409 bits (1051), Expect = e-112
 Identities = 211/323 (65%), Positives = 241/323 (74%), Gaps = 1/323 (0%)
 Frame = -3

Query: 1083 ASPLSFPAPLRGKAEIRTTRCSLQHHASSSKVVARRVLSGLAVSLIFISRANQVIAAELY 904
            ++P  F   + GK  ++   CS ++  +SS V  R VLSG A SLIF+S+ NQV+AA+++
Sbjct: 24   SAPPHFTRGVPGKLLLK---CSFEN-TTSSDVAVRHVLSGFAASLIFLSQTNQVLAADVF 79

Query: 903  HHLNLCQLAAVTDNSST-LKLDNGSDERSGKLMMMRGMSAKNFDPIRYSGRWFEVASLKR 727
               N+CQLA+  +N  T L LD+ S    GKLMMMR M+ K+FDP+RYSGRWFEVASLK 
Sbjct: 80   QSHNICQLASAAENKITPLPLDDSSGGGMGKLMMMRAMTVKDFDPVRYSGRWFEVASLKG 139

Query: 726  GFAGQGQEDCHCTQGVYTYDADASSIQVDTFCVHGGSDGYITGIRGNVQCLSXXXXXXXX 547
            GFAGQGQ DCHCTQGVYT D +  +IQVDTFCVHGG  GYITGIRG VQC+S        
Sbjct: 140  GFAGQGQGDCHCTQGVYTLDLETPAIQVDTFCVHGGPSGYITGIRGKVQCVSGDDLEKQA 199

Query: 546  XXXXXXEMIREKCYLRFPTLPFIPKLPYDVIATDYDNFALVSGAKDMGFIQVYSRNPVPG 367
                  EMI EKCYLRFPTLPFIPK PYDVIATDYDNFALVSGAKD  FIQ+YSR P PG
Sbjct: 200  TELEKQEMIAEKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFIQIYSRTPNPG 259

Query: 366  HAFIEKYKSYLENFGYDSSKIKDTPQDCEVMTNSKLXXXXXXXXXXXALTNQFPNLELNS 187
             AFIEKYK+YL NFGYD SKIKDTPQDCEVM+NSKL           ALTN+FP+LEL S
Sbjct: 260  PAFIEKYKAYLANFGYDPSKIKDTPQDCEVMSNSKLAAMMSMPGMQKALTNEFPDLELRS 319

Query: 186  SVQFNPFTSVFDTLKKLVPLYFK 118
            SVQFNPFTSVFDTLKKL+ LYFK
Sbjct: 320  SVQFNPFTSVFDTLKKLLELYFK 342


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