BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007255
         (1297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   402   e-110
ref|XP_002513323.1| membrane associated ring finger 1,8, putativ...   391   e-106
ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|2...   380   e-103
ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycin...   376   e-102
ref|XP_002310928.1| predicted protein [Populus trichocarpa] gi|1...   365   2e-98

>ref|XP_002268835.1| PREDICTED: E3 ubiquitin-protein ligase MARCH1 [Vitis vinifera]
            gi|297735744|emb|CBI18431.3| unnamed protein product
            [Vitis vinifera]
          Length = 258

 Score =  402 bits (1034), Expect = e-110
 Identities = 199/258 (77%), Positives = 214/258 (82%)
 Frame = -2

Query: 1140 MQLVSTGSRTEDISETEPILPQSNTLCRSDESPFSCEIRPLVDDCCVDETDPQSPDDDEF 961
            MQLVS   +TED SETEPIL QSN   R +ES  SCEIR +  DC + + D ++ D DE 
Sbjct: 1    MQLVSNDRQTEDGSETEPILCQSNIEQRLEESSTSCEIRTVEVDCSIVDGDLENLDTDEN 60

Query: 960  CNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECRA 781
            C LVN  QP CRICLDIGGEDLIAPC CRGTQKYVHRSCLD+WRSTKEGFAFAHCTECRA
Sbjct: 61   CALVNADQPQCRICLDIGGEDLIAPCHCRGTQKYVHRSCLDNWRSTKEGFAFAHCTECRA 120

Query: 780  LFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGYE 601
            +FILRANVPPDRWWLRLKFQ LV RDHAFIF             VYKFYGE+LREMFGY+
Sbjct: 121  VFILRANVPPDRWWLRLKFQLLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGYD 180

Query: 600  EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNKA 421
            EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE NK 
Sbjct: 181  EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREVNKD 240

Query: 420  PPELDPSYVTELKMLGLY 367
             PELDPS+VTEL+MLGLY
Sbjct: 241  VPELDPSHVTELRMLGLY 258


>ref|XP_002513323.1| membrane associated ring finger 1,8, putative [Ricinus communis]
            gi|223547231|gb|EEF48726.1| membrane associated ring
            finger 1,8, putative [Ricinus communis]
          Length = 256

 Score =  391 bits (1005), Expect = e-106
 Identities = 195/258 (75%), Positives = 211/258 (81%)
 Frame = -2

Query: 1140 MQLVSTGSRTEDISETEPILPQSNTLCRSDESPFSCEIRPLVDDCCVDETDPQSPDDDEF 961
            MQLVS  S+ EDISE EPIL QSN + RS+ES  SCEI  +  DC  D  D +S   DE 
Sbjct: 1    MQLVSNDSQKEDISEREPILRQSNIVQRSEESSSSCEITSIGQDC--DGDDLESVHVDET 58

Query: 960  CNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECRA 781
            C+LVN  QP CRICLD GGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTECRA
Sbjct: 59   CHLVNPDQPQCRICLDNGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRA 118

Query: 780  LFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGYE 601
             FILRANVPPDRWWLRLKFQFLV RDH FIF             VYKFYGE+LREMFGYE
Sbjct: 119  SFILRANVPPDRWWLRLKFQFLVARDHVFIFVVVQLIVAFLGMFVYKFYGEELREMFGYE 178

Query: 600  EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNKA 421
            EHPYGFYT+AVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE +K 
Sbjct: 179  EHPYGFYTVAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASKN 238

Query: 420  PPELDPSYVTELKMLGLY 367
             PELD ++VTEL+MLGLY
Sbjct: 239  VPELDATHVTELRMLGLY 256


>ref|XP_002315373.1| predicted protein [Populus trichocarpa] gi|222864413|gb|EEF01544.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score =  380 bits (977), Expect = e-103
 Identities = 191/259 (73%), Positives = 208/259 (80%), Gaps = 1/259 (0%)
 Frame = -2

Query: 1140 MQLVSTGSRTEDISETEPILPQSNTLCRSDE-SPFSCEIRPLVDDCCVDETDPQSPDDDE 964
            MQLVS  SR EDISE+EPIL  SN    S+E SP S EI+ L  DC +   D +S   DE
Sbjct: 1    MQLVSNDSRKEDISESEPILSHSNISQHSEEESPSSLEIKSLGRDCEIHVDDSESIQIDE 60

Query: 963  FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 784
             C+LVN   P CRICLD  GEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAFAHCTECR
Sbjct: 61   TCHLVNPDHPQCRICLDNEGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 783  ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGY 604
            A+F+LRANVP DRWWLRLKFQFLV RDHAFIF             VYKFYGE+LREMFGY
Sbjct: 121  AMFVLRANVPADRWWLRLKFQFLVARDHAFIFVVVQLIVAFLGVLVYKFYGEELREMFGY 180

Query: 603  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 424
            EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE +K
Sbjct: 181  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREASK 240

Query: 423  APPELDPSYVTELKMLGLY 367
              PEL  S+V+EL+MLGLY
Sbjct: 241  DVPELGASHVSELRMLGLY 259


>ref|NP_001240116.1| uncharacterized protein LOC100789593 [Glycine max]
            gi|255638130|gb|ACU19379.1| unknown [Glycine max]
          Length = 257

 Score =  376 bits (966), Expect = e-102
 Identities = 191/259 (73%), Positives = 209/259 (80%), Gaps = 1/259 (0%)
 Frame = -2

Query: 1140 MQLVSTGSRTEDISETEPILPQSNT-LCRSDESPFSCEIRPLVDDCCVDETDPQSPDDDE 964
            MQL S G + E+ SE+EPIL   +  L    ES FSCEI P+      D+ D Q+   DE
Sbjct: 1    MQLASNGDK-EECSESEPILNHHHLHLPPPGESSFSCEIIPISAAASGDD-DLQNVRVDE 58

Query: 963  FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 784
             C+LVN  QP CRICLDIGGEDLIAPC C+GTQKYVHRSCLD+WRSTKEGFAF+HCTECR
Sbjct: 59   TCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECR 118

Query: 783  ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGY 604
            A+FILRANVPPDRWWLRLKFQFLV RDHAFIF             VYKFYG++LREMFGY
Sbjct: 119  AVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGY 178

Query: 603  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 424
            EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VVE+RE  K
Sbjct: 179  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVK 238

Query: 423  APPELDPSYVTELKMLGLY 367
              PELDPS+VTEL+MLGLY
Sbjct: 239  NVPELDPSHVTELRMLGLY 257


>ref|XP_002310928.1| predicted protein [Populus trichocarpa] gi|118483623|gb|ABK93706.1|
            unknown [Populus trichocarpa] gi|222850748|gb|EEE88295.1|
            predicted protein [Populus trichocarpa]
          Length = 259

 Score =  365 bits (936), Expect = 2e-98
 Identities = 188/258 (72%), Positives = 204/258 (79%), Gaps = 1/258 (0%)
 Frame = -2

Query: 1140 MQLVSTGSRTEDISETEPILPQSNTLCRSDE-SPFSCEIRPLVDDCCVDETDPQSPDDDE 964
            MQLVS  SR +D SE+EPIL QSN L  S+E S  S EI+ L  DC V   + +S   DE
Sbjct: 1    MQLVSNDSRQKDFSESEPILSQSNILQHSEEESSSSREIKSLGRDCDVHVAELESICIDE 60

Query: 963  FCNLVNTGQPFCRICLDIGGEDLIAPCDCRGTQKYVHRSCLDHWRSTKEGFAFAHCTECR 784
               LVN  QP CRICLDIGGEDLIAPC C+GTQK+VHRSCLD+WRSTKEGFAFAHCTECR
Sbjct: 61   TSLLVNPDQPQCRICLDIGGEDLIAPCHCKGTQKHVHRSCLDNWRSTKEGFAFAHCTECR 120

Query: 783  ALFILRANVPPDRWWLRLKFQFLVVRDHAFIFXXXXXXXXXXXXXVYKFYGEDLREMFGY 604
            A+FILRANVP DRWWLRLKF FLV RDHA IF             VYKFYGE+LREMFGY
Sbjct: 121  AMFILRANVPADRWWLRLKFHFLVARDHALIFIVVQLVVAFLGVLVYKFYGEELREMFGY 180

Query: 603  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEFVVENREDNK 424
            EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKE+VV +RE  K
Sbjct: 181  EEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVLDREACK 240

Query: 423  APPELDPSYVTELKMLGL 370
              PEL  S+V+EL+MLGL
Sbjct: 241  DVPELGASHVSELRMLGL 258