BLASTX nr result

ID: Coptis23_contig00007247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007247
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28327.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002276067.1| PREDICTED: TGACG-sequence-specific DNA-bindi...   137   7e-31
gb|AGA20434.1| bZIP protein [Nelumbo nucifera]                        132   3e-29
ref|XP_002523796.1| DNA binding protein, putative [Ricinus commu...   129   2e-28
ref|XP_002313591.1| predicted protein [Populus trichocarpa] gi|2...   128   5e-28

>emb|CBI28327.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  137 bits (346), Expect = 7e-31
 Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +2

Query: 50  HHTSYAVLHDINPPSTTFMDQQGSAFDFGELEEAIALQGAKFRDDEAKRSFFTTRPATTL 229
           HH  YAVLH I+PP+ TF++Q+GSAFDFGELEEAI LQG K R+DEAK S FT RPA TL
Sbjct: 19  HHLPYAVLHGISPPAATFINQEGSAFDFGELEEAIVLQGVKIRNDEAKTSLFTARPAATL 78

Query: 230 EMFPSWPLRFQQTPI-XXXXXXXXXXXXXAQNTISYKADDAQLEPESPSSKKTSNEH--L 400
           EMFPSWP+RFQQT                A NT+S +A +AQLEPESP S K +++H   
Sbjct: 79  EMFPSWPMRFQQTQRGSSKSGGESTDSGSAVNTLSSRA-EAQLEPESPISIKPTSDHQAF 137

Query: 401 DQK 409
           DQK
Sbjct: 138 DQK 140


>ref|XP_002276067.1| PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1-like
           [Vitis vinifera]
          Length = 472

 Score =  137 bits (346), Expect = 7e-31
 Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 3/123 (2%)
 Frame = +2

Query: 50  HHTSYAVLHDINPPSTTFMDQQGSAFDFGELEEAIALQGAKFRDDEAKRSFFTTRPATTL 229
           HH  YAVLH I+PP+ TF++Q+GSAFDFGELEEAI LQG K R+DEAK S FT RPA TL
Sbjct: 19  HHLPYAVLHGISPPAATFINQEGSAFDFGELEEAIVLQGVKIRNDEAKTSLFTARPAATL 78

Query: 230 EMFPSWPLRFQQTPI-XXXXXXXXXXXXXAQNTISYKADDAQLEPESPSSKKTSNEH--L 400
           EMFPSWP+RFQQT                A NT+S +A +AQLEPESP S K +++H   
Sbjct: 79  EMFPSWPMRFQQTQRGSSKSGGESTDSGSAVNTLSSRA-EAQLEPESPISIKPTSDHQAF 137

Query: 401 DQK 409
           DQK
Sbjct: 138 DQK 140


>gb|AGA20434.1| bZIP protein [Nelumbo nucifera]
          Length = 488

 Score =  132 bits (332), Expect = 3e-29
 Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
 Frame = +2

Query: 56  TSYAVLHDINPPSTTFMDQQGSAFDFGELEEAIALQGAKFRDDEAKRSFFT-TRPATTLE 232
           ++Y V H I+ P+T +++QQGSAFDFGELE+AI LQ  K R+DEAKR+F T TRPA TLE
Sbjct: 17  SNYPVFHGISHPTTNYINQQGSAFDFGELEQAIVLQEIKNRNDEAKRTFLTATRPAATLE 76

Query: 233 MFPSWPLRFQQTPIXXXXXXXXXXXXXAQNTISYKADDAQLEPESPSSKKTSNEHLDQK 409
           MFPSWP+RFQQTP              AQNT+S KA D+QLEP SP SKK  ++ +DQK
Sbjct: 77  MFPSWPMRFQQTPRGSSKSGESTDSGSAQNTLSCKA-DSQLEPASPISKKGLDQSIDQK 134


>ref|XP_002523796.1| DNA binding protein, putative [Ricinus communis]
           gi|223536884|gb|EEF38522.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 443

 Score =  129 bits (324), Expect = 2e-28
 Identities = 78/126 (61%), Positives = 85/126 (67%), Gaps = 6/126 (4%)
 Frame = +2

Query: 50  HHTSYAV-LHDINPPSTTFMDQQGSAFDFGELEEAIALQGAKFRDDEAKRSFFTT--RPA 220
           HH SYA  LH IN  ST FM+Q+GSAFDFGELEEAI LQG K R+DEAK   FT   RPA
Sbjct: 19  HHLSYAAALHGINT-STNFMNQEGSAFDFGELEEAIVLQGVKIRNDEAKAPLFTVTGRPA 77

Query: 221 TTLEMFPSWPLRFQQTPI-XXXXXXXXXXXXXAQNTISYKADDAQLEPESPSSKKTSNEH 397
            TLEMFPSWP+RFQ TP               A NT+S KA DAQLEPESP SKK S++H
Sbjct: 78  ATLEMFPSWPMRFQHTPRGSSKSGGESTDSGSAVNTLSSKA-DAQLEPESPISKKASSDH 136

Query: 398 --LDQK 409
              DQK
Sbjct: 137 QGFDQK 142


>ref|XP_002313591.1| predicted protein [Populus trichocarpa] gi|222849999|gb|EEE87546.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  128 bits (321), Expect = 5e-28
 Identities = 71/124 (57%), Positives = 84/124 (67%), Gaps = 4/124 (3%)
 Frame = +2

Query: 53  HTSYAVLHDINPPSTTFMDQQGSAFDFGELEEAIALQGAKFRDDEAKRSFFTT--RPATT 226
           H  YA+LH IN PST+F++Q+GSAFDFGELEEAI LQG K R+DEAK   FT   RPA T
Sbjct: 20  HLPYALLHGINTPSTSFINQEGSAFDFGELEEAIVLQGVKIRNDEAKAPLFTVTGRPAAT 79

Query: 227 LEMFPSWPLRFQQTPI--XXXXXXXXXXXXXAQNTISYKADDAQLEPESPSSKKTSNEHL 400
           LEMFPSWP+RFQ+TP                A NT+S KA +A LEPESP SKK   +  
Sbjct: 80  LEMFPSWPMRFQETPRVGSSRSGGESTDSGSALNTLSSKA-EAHLEPESPISKKKHLQFQ 138

Query: 401 DQKQ 412
           +Q+Q
Sbjct: 139 EQQQ 142


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