BLASTX nr result
ID: Coptis23_contig00007240
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00007240
(1263 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15459.3| unnamed protein product [Vitis vinifera] 345 1e-92
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera] 345 1e-92
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm... 317 5e-84
ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|2... 315 1e-83
ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Ar... 289 9e-76
>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
Length = 830
Score = 345 bits (886), Expect = 1e-92
Identities = 197/417 (47%), Positives = 255/417 (61%), Gaps = 13/417 (3%)
Frame = +3
Query: 48 LAFSTAKLTEHPXXXXXXXXXXXXXXXKPSFLYLKPSFSSITT-SSVRTTEHSN--NSKT 218
+AF+TAKLTE P FL+ K S + SS+RTT+ +N N KT
Sbjct: 1 MAFATAKLTEFPFTSHSSSLH---------FLFPKTPLSLLKPFSSLRTTDSNNLRNRKT 51
Query: 219 RKNY----KESSKRSVHSAP------WINKWTPMTSKVDTMKKNPNLVKNKRKXXXXXXX 368
+++ ++S++S ++ P WINKW +++ K + +K +
Sbjct: 52 KRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKG---IDSKGRDGTES-- 106
Query: 369 XXXXXHKYFDGNKGNNSIERIVHRLRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 548
+YFDG G ++IERIV RLRNL K
Sbjct: 107 ------RYFDGRSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDE-----K 155
Query: 549 LGDLLQRNWGRPDTIIDDEEVDESMLLPWXXXXXXXXXXXXXKFKDKRVRAPTLAELTIE 728
LGDLLQR+W RPD+++ ++E ++ M+LPW + K + VRAPTLAELTIE
Sbjct: 156 LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215
Query: 729 DVELRRLRTQGMTLRERISIPKAGVTTVIVEKIHEKWRKAELVRLKFHETLAHDMRTAHE 908
D ELRRLR GMT+RERI++PKAG+T ++ KIHEKWRK ELVRLKFHE LAHDM+TAHE
Sbjct: 216 DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275
Query: 909 IVERRTGGLVIWRSGSVMVVFRGTNYERPSSRPQSVDSKSDTLFVPNIPSADDPQNGNDS 1088
IVERRTGGLV WRSGSVMVVFRGTNYE P +PQ VD + D+LFVP++ S D+P ND+
Sbjct: 276 IVERRTGGLVTWRSGSVMVVFRGTNYEGP-PKPQPVDGEGDSLFVPDVSSVDNPAMRNDN 334
Query: 1089 TSVSEKIEQSIRIGDPIPVESLTEEEIEYNSLLDGLGPRFVDWWGTGWLPIDADLLP 1259
+ S+ + +P+ E++TEEE EYNSLLDGLGPRFVDWWGTG LP+D DLLP
Sbjct: 335 NGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLP 391
>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
Length = 850
Score = 345 bits (886), Expect = 1e-92
Identities = 197/417 (47%), Positives = 255/417 (61%), Gaps = 13/417 (3%)
Frame = +3
Query: 48 LAFSTAKLTEHPXXXXXXXXXXXXXXXKPSFLYLKPSFSSITT-SSVRTTEHSN--NSKT 218
+AF+TAKLTE P FL+ K S + SS+RTT+ +N N KT
Sbjct: 1 MAFATAKLTEFPFTSHSSSLH---------FLFPKTPLSLLKPFSSLRTTDSNNLRNRKT 51
Query: 219 RKNY----KESSKRSVHSAP------WINKWTPMTSKVDTMKKNPNLVKNKRKXXXXXXX 368
+++ ++S++S ++ P WINKW +++ K + +K +
Sbjct: 52 KRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKG---IDSKGRDGTES-- 106
Query: 369 XXXXXHKYFDGNKGNNSIERIVHRLRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 548
+YFDG G ++IERIV RLRNL K
Sbjct: 107 ------RYFDGRSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDTMPVTGDE-----K 155
Query: 549 LGDLLQRNWGRPDTIIDDEEVDESMLLPWXXXXXXXXXXXXXKFKDKRVRAPTLAELTIE 728
LGDLLQR+W RPD+++ ++E ++ M+LPW + K + VRAPTLAELTIE
Sbjct: 156 LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215
Query: 729 DVELRRLRTQGMTLRERISIPKAGVTTVIVEKIHEKWRKAELVRLKFHETLAHDMRTAHE 908
D ELRRLR GMT+RERI++PKAG+T ++ KIHEKWRK ELVRLKFHE LAHDM+TAHE
Sbjct: 216 DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275
Query: 909 IVERRTGGLVIWRSGSVMVVFRGTNYERPSSRPQSVDSKSDTLFVPNIPSADDPQNGNDS 1088
IVERRTGGLV WRSGSVMVVFRGTNYE P +PQ VD + D+LFVP++ S D+P ND+
Sbjct: 276 IVERRTGGLVTWRSGSVMVVFRGTNYEGP-PKPQPVDGEGDSLFVPDVSSVDNPAMRNDN 334
Query: 1089 TSVSEKIEQSIRIGDPIPVESLTEEEIEYNSLLDGLGPRFVDWWGTGWLPIDADLLP 1259
+ S+ + +P+ E++TEEE EYNSLLDGLGPRFVDWWGTG LP+D DLLP
Sbjct: 335 NGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLP 391
>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
gi|223528164|gb|EEF30228.1| conserved hypothetical
protein [Ricinus communis]
Length = 745
Score = 317 bits (811), Expect = 5e-84
Identities = 191/415 (46%), Positives = 247/415 (59%), Gaps = 8/415 (1%)
Frame = +3
Query: 42 MALAFSTAKLTEHPXXXXXXXXXXXXXXXKPSFLYLKPSFSSITTSSVRTTEHSNNSKTR 221
MAL+ +TA+LTE P KPSF L FSS ++SS ++ N +
Sbjct: 1 MALSTTTARLTELPLRNSLPLFSSKTPK-KPSFHPLNRPFSSSSSSSSSSSSLGTNQNPK 59
Query: 222 KNYKESSKRSVHSAPWINKWTPMTSKVDTMKKNPNLVKNKRKXXXXXXXXXXXXHKYFDG 401
N +S PW++KW P +S T+K +P L ++K+ +
Sbjct: 60 PNNPKS--------PWLSKWAPHSSPPPTVKTSPKLAQDKKI-------------QSLTK 98
Query: 402 NKGNNSIERIVHRLRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGDLLQRNWGR 581
+KG N+IERIV RLRNL +L DLLQR W R
Sbjct: 99 DKGQNAIERIVLRLRNLGLGSDDEEEEGDMEYKPNGGDSIAVTGEE--RLADLLQREWVR 156
Query: 582 PDTII--DDEEVD-ESMLLPWXXXXXXXXXXXXXKFKDKR---VRAPTLAELTIEDVELR 743
PDTI DDEE D + ++LPW + + +R V+APTLAELTIED ELR
Sbjct: 157 PDTIFIKDDEEDDNDDLVLPWERKEKVRREGEKEEGERERRRVVKAPTLAELTIEDEELR 216
Query: 744 RLRTQGMTLRERISIPKAGVTTVIVEKIHEKWRKAELVRLKFHETLAHDMRTAHEIVERR 923
RLR GM LRER+++PKAG+T +VEKIH+KWRK ELVRLKFHE LAHDM+TAHEI ERR
Sbjct: 217 RLRRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEITERR 276
Query: 924 TGGLVIWRSGSVMVVFRGTNYERPSSRPQSVDSKSDTLFVPNIPSA--DDPQNGNDSTSV 1097
TGGLVIWR+GSVMVV+RG++YE P S+ Q V+ + D LF+P++ SA + + N + S
Sbjct: 277 TGGLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKGDNVAPSA 336
Query: 1098 SEKIEQSIRIGDPIPVESLTEEEIEYNSLLDGLGPRFVDWWGTGWLPIDADLLPP 1262
+EK E ++R D + +TEEEIEY+S LD LGPRF +WWGTG LP+DADLLPP
Sbjct: 337 AEKRELAMRRLDHS--KDMTEEEIEYDSFLDSLGPRFEEWWGTGILPVDADLLPP 389
>ref|XP_002317913.1| predicted protein [Populus trichocarpa] gi|222858586|gb|EEE96133.1|
predicted protein [Populus trichocarpa]
Length = 806
Score = 315 bits (808), Expect = 1e-83
Identities = 190/414 (45%), Positives = 242/414 (58%), Gaps = 9/414 (2%)
Frame = +3
Query: 48 LAFSTAKLTEHPXXXXXXXXXXXXXXXKP--SFLYLKPSFSSITTSSVRTTEHSNNSKTR 221
+ F+TAKLTE P +F LK FS+ T+SS+RT +KT
Sbjct: 1 MTFTTAKLTELPLRTTSTLPLSSHSLLSKIATFQSLKKPFSTATSSSLRT------NKTP 54
Query: 222 KNYKESSKRSVHSAPWINKWTPMTSKVDTMKKNPNLVKNKRKXXXXXXXXXXXXHKYFDG 401
K +++ WI+KW P S+ ++K P+ V ++ YF
Sbjct: 55 KTQQKNPN-------WISKWKP--SQNHSIKNPPSEVSQEKPH-------------YFSN 92
Query: 402 NKGNNSIERIVHRLRNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLGDLLQRNWGR 581
+KG N+IERIV RLRNL +LGDLL+R W R
Sbjct: 93 DKGQNAIERIVLRLRNLGLGSDDEDELEGLEGSEINGGGLTGEE----RLGDLLKREWVR 148
Query: 582 PDTII---DDEEVDESMLLPWXXXXXXXXXXXXX--KFKDKRVRAPTLAELTIEDVELRR 746
PDT++ D+ + +LPW + +R +APTLAELTIED ELRR
Sbjct: 149 PDTVVFSNDEGSDSDESVLPWEREERGAVEMEGGIESGRKRRGKAPTLAELTIEDEELRR 208
Query: 747 LRTQGMTLRERISIPKAGVTTVIVEKIHEKWRKAELVRLKFHETLAHDMRTAHEIVERRT 926
LR GM +RERISIPKAG+T ++E IH++WRK ELVRLKFHE LAHDM+TAHEIVERRT
Sbjct: 209 LRRMGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVERRT 268
Query: 927 GGLVIWRSGSVMVVFRGTNYERPSSRPQSVDSKSDTLFVPNIPSADD--PQNGNDSTSVS 1100
GGLVIWR+GSVMVVFRGTNY+ P S+ Q D + D LFVP++ S D ++ N +TS S
Sbjct: 269 GGLVIWRAGSVMVVFRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIATSSS 328
Query: 1101 EKIEQSIRIGDPIPVESLTEEEIEYNSLLDGLGPRFVDWWGTGWLPIDADLLPP 1262
EK + +RI +P E++TEEE E NSLLD LGPRF +WWGTG LP+DADLLPP
Sbjct: 329 EKSKLVMRITEP--TENMTEEEAELNSLLDDLGPRFEEWWGTGLLPVDADLLPP 380
>ref|NP_188468.1| CRS1 / YhbY (CRM) domain-containing protein [Arabidopsis thaliana]
gi|11994102|dbj|BAB01105.1| unnamed protein product
[Arabidopsis thaliana] gi|17380904|gb|AAL36264.1| unknown
protein [Arabidopsis thaliana]
gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM)
domain-containing protein [Arabidopsis thaliana]
Length = 848
Score = 289 bits (740), Expect = 9e-76
Identities = 173/389 (44%), Positives = 226/389 (58%), Gaps = 15/389 (3%)
Frame = +3
Query: 141 LYLKPSFSSITT--SSVRTTEHSNNSKTRKNYKESSKRSVHSAPWINKWTPMTSKVD--- 305
L +KPS I SS+RT+E SNN ++ N + + + PWI+KW P +S
Sbjct: 39 LGVKPSRQQIVRPFSSLRTSERSNN-RSNNNRRLDQRNHKPTPPWIDKWPPSSSGAGGDH 97
Query: 306 TMKKNPNLVKNKRKXXXXXXXXXXXXHKYFDGNKGNNSIERIVHRLRNLXXXXXXXXXXX 485
KK N +Y + +KG N+IERIV RLRNL
Sbjct: 98 AGKKGGE--NNGGDRIRSAEEEAEAKLRYLEKDKGQNAIERIVLRLRNLGLGSDDEDDVE 155
Query: 486 XXXXXXXXXXXXXXXXXXXXKLGDLLQRNWGRPDTII---DDEEVDESMLLPWXXXXXXX 656
+LGDLL+R W RPD ++ ++ E ++ +LLPW
Sbjct: 156 DDEGGGINGGDVKPVTGEE-RLGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQ 214
Query: 657 XXXXXXK------FKDKRVRAPTLAELTIEDVELRRLRTQGMTLRERISIPKAGVTTVIV 818
+ +R RAP+LAELT+ED ELRRLR GM LR RI+IPKAG+T ++
Sbjct: 215 AAERVVGEGGVAVMQKRRARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVM 274
Query: 819 EKIHEKWRKAELVRLKFHETLAHDMRTAHEIVERRTGGLVIWRSGSVMVVFRGTNYERPS 998
EKI++ WRK ELVRLKFHE LA DM+TAHEIVERRTGG+VIWR+GSVMVV+RG +Y+ P
Sbjct: 275 EKIYDTWRKEELVRLKFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPP 334
Query: 999 SRPQSVDSKSDTLFVPNIPSA-DDPQNGNDSTSVSEKIEQSIRIGDPIPVESLTEEEIEY 1175
+ +TLFVP++ SA D+ N D+ S I+ I I +PI E++TEEE+E+
Sbjct: 335 VISNQMAGPKETLFVPDVSSAGDEATNAKDNQSAPLVIKDPI-IKNPIRKENMTEEEVEF 393
Query: 1176 NSLLDGLGPRFVDWWGTGWLPIDADLLPP 1262
NSLLD LGPRF +WWGTG LP+DADLLPP
Sbjct: 394 NSLLDSLGPRFQEWWGTGVLPVDADLLPP 422