BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00007234
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumi...   174   3e-41
sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat ...   171   3e-40
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...   169   1e-39
ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus ...   164   3e-38
ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arab...   162   2e-37

>ref|XP_004134625.1| PREDICTED: F-box protein SKIP19-like [Cucumis sativus]
           gi|449490588|ref|XP_004158648.1| PREDICTED: F-box
           protein SKIP19-like [Cucumis sativus]
          Length = 311

 Score =  174 bits (442), Expect = 3e-41
 Identities = 104/258 (40%), Positives = 147/258 (56%), Gaps = 3/258 (1%)
 Frame = -2

Query: 885 KSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIV---IPSRW 715
           + E+ NWL+LP DV  +IL KL  ++IL   Q VCSSWRK+C++P  + R++    P  W
Sbjct: 11  EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMW-RVIDMRYPCDW 69

Query: 714 EDCARLGGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFSVVERSNTLKYLRLD 535
            D         L EL + A+ RSCG+L+ F++E        DLL  + +  N L  LRL 
Sbjct: 70  WDMDY-----NLEELCRQAVKRSCGQLIHFNIE---HFGTDDLLLYITQSCNQLSRLRLV 121

Query: 534 TCFTFQSRSMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSQ 355
            C       + + ++ K+PLLE+LE+ + SF V  +E +G++CP L   KL  +  +Y +
Sbjct: 122 YCNRISDEGLVEAVS-KLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQ--FYRR 178

Query: 354 GDCNKMVFPIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFRXXXXXXXX 175
            +C+K    IAE+MP LR L +  N LTN GL+AILDGC  LE LDLR CF         
Sbjct: 179 VECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLG 238

Query: 174 XXXSDRIIDVRLPKDAID 121
              S++I D+RLP D  D
Sbjct: 239 AKCSEKIKDLRLPHDPTD 256


>sp|Q9S9V9.1|FBL23_ARATH RecName: Full=Putative F-box/LRR-repeat protein 23
           gi|5732066|gb|AAD48965.1|AF147263_7 contains similarity
           to Medicago truncatula N7 protein (GB:Y17613)
           [Arabidopsis thaliana] gi|7267310|emb|CAB81092.1|
           AT4g05500 [Arabidopsis thaliana]
          Length = 449

 Score =  171 bits (433), Expect = 3e-40
 Identities = 104/259 (40%), Positives = 146/259 (56%), Gaps = 1/259 (0%)
 Frame = -2

Query: 894 MKEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRW 715
           MK+K +  NW +LP  +   IL +L  I+IL + Q+VC  W ++CK+P  + +I I +R 
Sbjct: 173 MKDK-KLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRN 231

Query: 714 EDCARLGGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFSVVERSNTLKYLRLD 535
           +   R      L  + + A+DRS G L+E  +         DL+  + +RS+ LK L L 
Sbjct: 232 D---RAAFKYDLESMCRHAVDRSHGGLIEIEIW---YYGTNDLIMYIADRSSNLKSLGLV 285

Query: 534 TCFTFQSRSMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKL-KGELPWYS 358
            CF      + K ++ K+PLLE LE+ Y  FS  ++ ++GRSCPNL   KL +     +S
Sbjct: 286 RCFPITDEGVAKAVS-KVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFS 344

Query: 357 QGDCNKMVFPIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFRXXXXXXX 178
               +     IAESMP+LR L LL NGLTN GL AILDGCPHLE+LDLR+CF        
Sbjct: 345 NSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDL 404

Query: 177 XXXXSDRIIDVRLPKDAID 121
                +RI D+R P D+ D
Sbjct: 405 KKRCFERIKDLRCPNDSDD 423



 Score = 67.0 bits (162), Expect = 7e-09
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -2

Query: 327 IAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFRXXXXXXXXXXXSDRIID 148
           IAE+MP+LR L L  NGLTN  L+AILD C HL +LDLR+CF            S+RI D
Sbjct: 25  IAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINLLGDLEKRCSERIRD 84

Query: 147 VRLPKDA 127
           +R P D+
Sbjct: 85  LRRPDDS 91


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score =  169 bits (427), Expect = 1e-39
 Identities = 99/257 (38%), Positives = 153/257 (59%)
 Frame = -2

Query: 891 KEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWE 712
           +E+ E  NW +LPRDV  +ILSKL+ ++IL S Q VCS WRKLC+EP  +  I + +  +
Sbjct: 12  EEEEEERNWQELPRDVTSMILSKLNAVEILSSAQFVCSFWRKLCREPMMWRNIDMHNLGD 71

Query: 711 DCARLGGADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFSVVERSNTLKYLRLDT 532
            C    G D L E+ + A+DRS G+L+   ++        +LL  +++RS+ +++LRL +
Sbjct: 72  LCDL--GYD-LEEMARHAVDRSGGQLLSICID---DFATDNLLNYIIDRSSHIRHLRLVS 125

Query: 531 CFTFQSRSMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSQG 352
           C+      + + I R +PLL E+++ Y SFS   +E +G+ CP L  F+L  +   +   
Sbjct: 126 CYGISDDGLSEGIKR-LPLLVEIDLCYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHI 184

Query: 351 DCNKMVFPIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFRXXXXXXXXX 172
           +C++    IA++MP L+ L L  N LTN+GL AILDGC HLE LDLR+CF          
Sbjct: 185 ECDEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAK 244

Query: 171 XXSDRIIDVRLPKDAID 121
             +++I  +R P D+ D
Sbjct: 245 RCAEQIKILRYPNDSTD 261


>ref|XP_002526604.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534044|gb|EEF35763.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 305

 Score =  164 bits (415), Expect = 3e-38
 Identities = 103/250 (41%), Positives = 136/250 (54%)
 Frame = -2

Query: 870 NWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWEDCARLGG 691
           NW +LPRDV  +IL K+   DIL S Q VCSSW  +CK+P  +  + I      C     
Sbjct: 18  NWAELPRDVTALILDKVGAFDILGSAQFVCSSWNSVCKDPSMWRSVEIHPL---CDFWDL 74

Query: 690 ADGLAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFSVVERSNTLKYLRLDTCFTFQSR 511
              L  L + A+DRS G L+  S+E         L+  + +RS+ LK LRL + +T  S 
Sbjct: 75  PFDLEALCRNAVDRSRGGLISISIE---YFATDSLIKYIADRSSHLKRLRLLSSYTL-SD 130

Query: 510 SMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGELPWYSQGDCNKMVF 331
           + + + A+K PLLEEL+I Y S S  A+  VG SCP L   KL  +       + N+   
Sbjct: 131 AAFSKAAKKFPLLEELDISYCSLSTEALVGVGISCPLLRSLKLNCQGYKRPHIESNEEAL 190

Query: 330 PIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFRXXXXXXXXXXXSDRII 151
            I + MP LR L +  N LTNDG+QAILDGCPHLE+LDLR+CF             +RI 
Sbjct: 191 AIGQWMPHLRYLQIFGNKLTNDGVQAILDGCPHLEFLDLRQCFNVHLEGELGMLCGERIK 250

Query: 150 DVRLPKDAID 121
           D+R P D  D
Sbjct: 251 DLRRPDDPTD 260


>ref|XP_002874843.1| hypothetical protein ARALYDRAFT_911810 [Arabidopsis lyrata subsp.
            lyrata] gi|297320680|gb|EFH51102.1| hypothetical protein
            ARALYDRAFT_911810 [Arabidopsis lyrata subsp. lyrata]
          Length = 610

 Score =  162 bits (409), Expect = 2e-37
 Identities = 105/267 (39%), Positives = 150/267 (56%), Gaps = 6/267 (2%)
 Frame = -2

Query: 900  NTMKEKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPS 721
            +++ +  E  NW +LP ++   IL +L TIDIL + Q+VC SWR++CK+P  + +I    
Sbjct: 336  SSLVKDEEVRNWAELPPELTSSILGRLGTIDILENAQKVCRSWRRVCKDPSMWRKI---- 391

Query: 720  RWEDCARLG--GADG--LAELVKVAMDRSCGELVEFSLETRKQVVLIDLLFSVVERSNTL 553
               D   LG  GA G  L  + + A+DRS G LVE  +         +LL  + +RS+ L
Sbjct: 392  ---DMDNLGDLGAMGYDLEIMCRHAVDRSQGGLVEIDIW---YFGTDELLNYIADRSSNL 445

Query: 552  KYLRLDTCFTFQSRSMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKGE 373
            + LRL  C+        + +  K+PL+E LE+ + S S  +++ VG+SCPNL   KL  E
Sbjct: 446  RTLRLIMCYPIADEGFIEAVV-KLPLIEYLELSHCSLSGESLKVVGQSCPNLKTLKLNSE 504

Query: 372  L-PWYSQGDCN-KMVFPIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKCFR 199
              P ++  + N +    IAESMP+LR L L  N LTN GL AILDGCPHLE+LDLRKC  
Sbjct: 505  PDPKFNDDEFNNEEALAIAESMPELRHLQLFGNILTNVGLNAILDGCPHLEHLDLRKCSN 564

Query: 198  XXXXXXXXXXXSDRIIDVRLPKDAIDG 118
                        +RI D++ P D+  G
Sbjct: 565  VDLTGDLEKRCVERIKDLKRPTDSTAG 591



 Score =  150 bits (378), Expect = 7e-34
 Identities = 98/267 (36%), Positives = 143/267 (53%), Gaps = 12/267 (4%)
 Frame = -2

Query: 888 EKSETSNWLDLPRDVMIIILSKLHTIDILYSVQRVCSSWRKLCKEPQFFCRIVIPSRWED 709
           E  +  NW +LP ++   IL +L  ++IL + Q+VC SWR++CK+P  + +IVI +    
Sbjct: 2   EDGDYRNWAELPAELTSSILLRLGVVEILENAQKVCRSWRRVCKDPSMWRKIVIDNS--- 58

Query: 708 CARLGGAD----GLAELVKVAMDRSCGELVEFSLETRKQVVLIDLL-----FSVVERSNT 556
               G  D     L  + + A+DRS G L+E  +E      L+D +      S+   S+ 
Sbjct: 59  ----GNRDIFKYDLDSMCRHAVDRSQGGLLEIDIEYFGTDKLLDYIADRFSLSLFSISSN 114

Query: 555 LKYLRLDTCFTFQSRSMWKQIARKIPLLEELEIHYDSFSVMAIEEVGRSCPNLHYFKLKG 376
           L+ LRL  C     + + + +  K+PLLE+LE+ Y SFS   +  VG+SCP+L   KL  
Sbjct: 115 LRSLRLVRCHQITDKGVAEAVV-KLPLLEDLEVSYCSFSGECLSVVGQSCPHLTTLKLNR 173

Query: 375 ELPW---YSQGDCNKMVFPIAESMPQLRRLSLLENGLTNDGLQAILDGCPHLEYLDLRKC 205
                   +  D N +   IAESMP+LR L LL N LTN GL AILD C HL++LDLR+C
Sbjct: 174 RPRVEFVINMRDHNAIA--IAESMPELRHLQLLGNALTNTGLNAILDSCTHLDHLDLRQC 231

Query: 204 FRXXXXXXXXXXXSDRIIDVRLPKDAI 124
           +             +RI  +R P D+I
Sbjct: 232 YNINLVEDFMKQCVERIKYLRCPNDSI 258